EY661117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 51/148 (34.46%), Postives = 68/148 (45.95%), Query Frame = 1 Query: 73 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 441 AV V+ G + T+ F +G+GP VKG ++GL G H +H +G+ S GP F P G L N+T S G+A I I LSG SVIGR LVVH S+ + + G +A G IG+S Sbjct: 5 AVCVLKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLACGVIGIS 152
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 51/129 (39.53%), Postives = 64/129 (49.61%), Query Frame = 1 Query: 70 NAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDGV 417 NA+AV+ G G + F + G PTTV G + GL PG H IH YG+ +N IS GP F P G L NI ++G A I + I L G NS+IGR +VVH+ D G GV Sbjct: 4 NAIAVLRGDTV-SGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHAD-QDDLGKGV 130
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 49/151 (32.45%), Postives = 73/151 (48.34%), Query Frame = 1 Query: 67 VNAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKP------AGAD-----GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 441 + AV V+ G +GT+ F + SG P + G ++GL G H +H YG+ + S GP F P AD G L N+T +G+A I + I LSG +S+IGR +VVH S+ + + G +A G IG++ Sbjct: 3 MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGIA 153
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 46/128 (35.94%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 67 VNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVHSSPSPDPGDG 414 + AV V+ G +G + F +GSGP V G ++GL GDH +H +G+ +N S G F P G G L N+T G+A EI I L+G + +IGR +VVH+ S D G G Sbjct: 4 LKAVCVMKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHVGDLGNVTAKG-GVAEVEIEDSVISLTGPHCIIGRTMVVHAK-SDDLGRG 129
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 49/151 (32.45%), Postives = 72/151 (47.68%), Query Frame = 1 Query: 67 VNAVAVITGTNGRKGTVSFSVE-GSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 441 + AV V+TGT G KG V F+ E +GP V SGL G H +H +G+ +N S G F P + G L N+ ++G A + K I L+G++S+IGR +V+H S + + G +A G IGL+ Sbjct: 1 MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLACGVIGLA 151
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 50/130 (38.46%), Postives = 64/130 (49.23%), Query Frame = 1 Query: 64 MVNAVAVITGTNGRKGTVSFSVEGSG-PTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYK-TIPLSGTNSVIGRGLVVHSSPSPDPGDG 414 +V AV VI G KGTV F EG G P V G ++GL G H +H +G+ +N +S+GP F P + G L NI +G I I L G NS+IGR +VVH+ P D G G Sbjct: 2 VVKAVCVINGD--AKGTVFFEQEGEGCPVKVTGEVTGLAKGQHGFHVHEFGDNTNGCMSSGPHFNPYQKEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVHADPD-DLGKG 128
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11 Identity = 47/129 (36.43%), Postives = 64/129 (49.61%), Query Frame = 1 Query: 64 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 414 MV AV V+ G+ KG V F + G +V+G + GL G H IH +G+ +N +S G F P + G L N+T G+A F+I + I L G NS+IGR VVH + D G G Sbjct: 1 MVKAVCVLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHVGDLGNVTAEG-GVAQFKITDSLISLKGPNSIIGRTAVVHEK-ADDLGKG 127
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 45/126 (35.71%), Postives = 62/126 (49.21%), Query Frame = 1 Query: 73 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 414 AV V+ G +GT+ F +G V GS++GL GDH +H +G+ + S GP F P G L N+T G+A +I + I LSG +S+IGR +VVH P D G G Sbjct: 5 AVCVLKGDGPVQGTIRFEAKGH-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLISLSGEHSIIGRTMVVHEKPD-DLGRG 128
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_CEBAP (Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SOD1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11 Identity = 49/151 (32.45%), Postives = 72/151 (47.68%), Query Frame = 1 Query: 67 VNAVAVITGTNGRKGTVSFSV-EGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLSGTNSVIGRGLVVH-------------SSPSPDPGDGVAWGTIGLS 441 + AV V+ G +GT++F E +GP V GS++GL G H +H +G+ + S GP F P G L N+T +G+A I I LSG +S+IGR LVVH S+ + + G +A G IG++ Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIA 153
BLAST of EY661117 vs. ExPASy Swiss-Prot
Match: SODC_BOSMU (Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens GN=SOD1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11 Identity = 45/126 (35.71%), Postives = 61/126 (48.41%), Query Frame = 1 Query: 73 AVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLSGTNSVIGRGLVVHSSPSPDPGDG 414 AV V+ G +GT+ F +G V GS++GL GDH +H +G+ + S GP F P G L N+T G+A +I + I LSG S+IGR +VVH P D G G Sbjct: 5 AVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAVVDIVDSLISLSGEYSIIGRTMVVHEKPD-DLGRG 128 The following BLAST results are available for this feature:
BLAST of EY661117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661117 ID=EY661117; Name=EY661117; organism=Citrus sinensis; type=EST; length=693bpback to top |