EY661049

Overview
NameEY661049
Unique NameEY661049
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.242e-17
Identity = 60/176 (34.09%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  248 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXE-EVIDSSLEFLILASDGLWDVVTNEEAV----AMINXIPGSEEAAKRLMXEAYQRGSADNITCVV 730
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE      + +      E+    ++     +GS DN++ ++
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVIL 288          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 60/176 (34.09%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  248 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXE-EVIDSSLEFLILASDGLWDVVTNEEAV----AMINXIPGSEEAAKRLMXEAYQRGSADNITCVV 730
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE      + +      E+    ++     +GS DN++ ++
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVIL 288          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 60/176 (34.09%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  248 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXE-EVIDSSLEFLILASDGLWDVVTNEEAV----AMINXIPGSEEAAKRLMXEAYQRGSADNITCVV 730
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE      + +      E+    ++     +GS DN++ ++
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVIL 288          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 60/176 (34.09%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  248 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXE-EVIDSSLEFLILASDGLWDVVTNEEAV----AMINXIPGSEEAAKRLMXEAYQRGSADNITCVV 730
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE      + +      E+    ++     +GS DN++ ++
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVIL 288          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.237e-17
Identity = 60/176 (34.09%), Postives = 89/176 (50.57%), Query Frame = 2
Query:  248 SENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXE-EVIDSSLEFLILASDGLWDVVTNEEAV----AMINXIPGSEEAAKRLMXEAYQRGSADNITCVV 730
            SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ + E  +   +F+ILA DG+WDV+ NEE      + +      E+    ++     +GS DN++ ++
Sbjct:  116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVIL 288          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 59/168 (35.12%), Postives = 85/168 (50.60%), Query Frame = 2
Query:  269 DAGSTASTAILVGDRLL-VANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMI----NXIPGSEEAAKRLMXEAYQRGSADNITCVV 730
            + G   +  +LV  R L +A+ GDSRAV+ R G     + DH+P +  ER+RI  AGG +      RV G LAVSRA GD   K         Q V A+PE+      +  EF++LASDG+WD V+      ++          E    +L+     +GS DN+TC++
Sbjct:  159 ETGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIR---RRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLGLAPELLCAQLLDTCLCKGSLDNMTCIL 323          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: P2C38_ORYSJ (Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 64/192 (33.33%), Postives = 99/192 (51.56%), Query Frame = 2
Query:  272 AGSTASTAILVGDRLLVANVGDSRAVICRGGN-----AIAVSRDHKPDQTDERQRIEDAGGFV-----------MWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMINXIPGSEEAAKRLMXEAYQRG-------SADNITCVVCSVLGNQGGSSFPGS 775
            +G+TA T I  G  LL+ N+GDSRAV+          A+ ++ D KP    E  RI +  G +           +W   + + G LA++RAFGD  LK Y +++ P++    I    EF++LA+DG+WDV++N E V++++    SE +A R + E+ QR        S  +   VVC  L     +  PGS
Sbjct:  254 SGTTAVTVIKQGHDLLIGNLGDSRAVLGTRDEYDQFFAVQLTVDLKPTIPSEAARIRERSGRIFSLPDEPDVARVWLPKYNMPG-LAMARAFGDFCLKDYGLISMPDVSYHRITEKDEFVVLATDGVWDVLSNSEVVSIVSQAK-SEASAARFVVESAQRAWRTRFPTSKIDDCAVVCLFLNTDARNKPPGS 443          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: P2C03_ORYSJ (Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica GN=Os01g0513100 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.750e-16
Identity = 59/184 (32.07%), Postives = 108/184 (58.70%), Query Frame = 2
Query:  227 TDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAV-SRDHKPDQT-DERQRIEDAGGFV---MWAGTWRVG------GVLAVSRAFGDRLLKQYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMINXIPGSEEAAKRLMXEAYQ-RGSADNITCVVCSVL 742
            TD EF     ++ + +G+TA+  I+ G  + VA+VGDSR ++   G A+++ + DH+ ++  +ER+R+  +GG V      G   +G      G L +SR+ GD  + +++V  P + +  + ++   LI+ASDG+WD +++E A      +P +E AAK+++ EA + RG  D+ TC+V  ++
Sbjct:  176 TDKEF----QHKGQTSGTTATFVIIDGWTITVASVGDSRCILDAQGGAVSLLTVDHRLEENVEERERVTASGGEVGRLSVVGGAEIGPLRCWPGGLCLSRSIGDIDVGEFIVPVPYVKQVKLSNAGGRLIIASDGIWDALSSEAAAKCCRGLP-AELAAKQVVKEALRTRGLKDDTTCIVVDMI 354          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: Y2105_DICDI (Probable protein phosphatase DDB_G0282105 OS=Dictyostelium discoideum GN=DDB_G0282105 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.126e-16
Identity = 64/200 (32.00%), Postives = 105/200 (52.50%), Query Frame = 2
Query:  188 YNCSKSPADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDR----------LLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY---VVADPEIXEE-VIDSSLEFLILASDGLWDVVTNEEAVAMINXI----PGSEEAAKRLMXEAYQRG-SADNITCVV 730
            +N SK   D +S+ D++    E       G TA+ A++  D           L V NVGDS A +CRG  +I ++ DHK +   E+QRI+D G  V    T R+ GV AVSR+ G+  +K+    +++ P I    ++    +F+I+ASDGLWDV+  ++A+  ++ +      ++  A  L+  A Q     DN+T ++
Sbjct:  763 HNQSKLLNDLFSNVDNKMKDHEYE-----GCTATLALIWSDGEEQQQQQQRYLQVGNVGDSSAFLCRGNESIELTFDHKANDPSEKQRIKDQGIPVSDNQT-RINGV-AVSRSLGNHFIKEQNIGMISTPHISNRYLLTPQDKFVIIASDGLWDVINGKDAIEKVSSLYDQGATADSMASCLLETAIQSSLCKDNVTVII 955          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.126e-16
Identity = 60/182 (32.97%), Postives = 94/182 (51.65%), Query Frame = 2
Query:  275 GSTASTAILVGDRLLVANVGDSRAVICR-GGNAIAVSRDHKP--DQTDERQRIEDAGGFVMWAGTWRV---------------GGVLAVSRAFGDRLLK---------QYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMINXIPGSEEAAKRLMXE---AYQRGSADNITCVV 730
            GSTA   ++ G++++V +VGDSR V+ R GG AI +S DHKP      ER+R+++AGG  +     +V               GG + +SR+ GD   K         Q +V DP+I  + I   +EFL++AS GLW  V + + V+ I+     E A  R++ E    +   S +N T ++
Sbjct:  143 GSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGGRSLGLRCEQVMGNYVVKEQWVLGDFGGGVTISRSIGDFAFKKNKDLDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASGENTTVIL 324          
The following BLAST results are available for this feature:
BLAST of EY661049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
PPM1A_BOVIN4.242e-1734.09Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
PPM1A_RAT7.237e-1734.09Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1A_RABIT7.237e-1734.09Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_MOUSE7.237e-1734.09Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]
PPM1A_HUMAN7.237e-1734.09Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
PPMBL_HUMAN1.234e-1635.12Probable protein phosphatase 1B-like OS=Homo sapie... [more]
P2C38_ORYSJ1.612e-1633.33Probable protein phosphatase 2C 38 OS=Oryza sativa... [more]
P2C03_ORYSJ2.750e-1632.07Probable protein phosphatase 2C 3 OS=Oryza sativa ... [more]
Y2105_DICDI6.126e-1632.00Probable protein phosphatase DDB_G0282105 OS=Dicty... [more]
P2C16_ORYSJ6.126e-1632.97Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661049 ID=EY661049; Name=EY661049; organism=Citrus sinensis; type=EST; length=927bp
CCACGCGTCCGGTTTTTGATGGTCATGGGGGTGCACGAGCTGCTGAGTAT
GTGAAACACAACCTCTTCAGCAATCTGATCAGGCATCCAAAGTTCATATC
TGATACCAAATCGGCAATAGGTTATATACTTTGTAACTAATAATGTTCTA
TAAGTTTAGTTTTCATCATACTGATTTCTTGCTTTTCTATAATTGCTCCA
AATCTCCAGCTGATGCATACAGCCACACAGACTCGGAATTTCTGAAGTCA
GAAAACAATCAAAACAGGGATGCTGGATCTACTGCTTCCACTGCCATCCT
TGTTGGTGATCGCTTACTTGTTGCAAATGTGGGTGACTCCAGAGCTGTTA
TATGCAGGGGCGGTAATGCTATTGCCGTATCGCGAGATCACAAACCAGAC
CAAACAGATGAGCGTCAACGGATTGAGGATGCAGGAGGGTTTGTGATGTG
GGCTGGAACTTGGAGAGTGGGAGGAGTTCTTGCCGTTTCTCGCGCATTTG
GTGACAGACTCTTGAAGCAGTATGTTGTTGCTGATCCCGAAATTCANGAG
GAAGTTATTGACAGCTCCCTTGAGTTTCTTATCCTTGCAAGTGATGGACT
TTGGGATGTCGTCACAAATGAAGAAGCTGTTGCGATGATCAACCNNATCC
CAGGATCAGAGGAGGCAGCGAAGAGGCTGATGCANGAGGCATATCAAAGA
GGCAGCGCAGACAACATCACCTGTGTCGTTTGTTCGGTTCTTGGCAATCA
AGGTGGTTCATCCTTTCCTGGCTCTGCATGAACATCCTTTCATAGGCACC
GCTCTGCTTTTGTTCTCTACATGGGCATCCCTTCAGTGGTCTACAGCTAG
TAGTCATAAAAAAATTACAGNTTCCGTTGACTTTGAAATGATGAAACATG
ACAAAAGCTTACCCGGGCGTAATGTGG
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