EY661049

Overview
NameEY661049
Unique NameEY661049
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: P2C73_ARATH (Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.409e-20
Identity = 66/187 (35.29%), Postives = 106/187 (56.68%), Query Frame = 2
Query:  272 AGSTASTAILVGDRLLVANVGDSRAVICRGGN-----AIAVSRDHKPDQTDERQRI-----------EDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMINXIPGSEEAAKRLMXEAY------QRGSADNITCVVCSVLGNQGGSS 763
            +G+TA T +  G+ + VANVGDSRAV+    +     A+ ++ D KP+   E++RI           ++ G   +W       G LA+SRAFGD  +K+Y +V+ PE+ +  I +   F+ILASDG+WDV++N+EA+ +++      +AAKRL+ +A       +RG + +   VVC  L +   SS
Sbjct:  176 SGTTALTIVRQGEVIYVANVGDSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFCLDDEPGVHRVWQPDAETPG-LAMSRAFGDYCIKEYGLVSVPEVTQRHISTKDHFIILASDGIWDVISNQEAIEIVSSTAERPKAAKRLVEQAVRAWKKKRRGYSMDDMSVVCLFLHSSSSSS 361          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.589e-20
Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  191 NCSKSPADAYSHTDSEFLKSENNQNRDAGSTASTAILVG---DRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXEEVIDSSL-EFLILASDGLWDVVTNEEAVAMIN 643
            N  ++  D + +TD + L+    +   +G TA T+ILV    + L+  N GDSR V+   GNA A+S DHKP    E+ RI  A GFV      RV G LA+SRA GD   K         Q V   P+I E  +D    EF+ILA DG+WD +T+++ V +++
Sbjct:   91 NLPRALIDTFINTDVKLLQDPVMKEDHSGCTA-TSILVSKSQNLLVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMD---RVNGNLALSRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGIWDCLTSQDCVDLVH 250          

HSP 2 Score: 29.6462 bits (65), Expect = 2.589e-20
Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 3
Query:   12 VFDGHGGARAAEYVKHNLFSNLIRHPKF 95
            +FDGHGGA+ AEY  + +   L     F
Sbjct:   60 IFDGHGGAKVAEYCGNKIVEILQEQKSF 87          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 3.386e-20
Identity = 68/206 (33.01%), Postives = 96/206 (46.60%), Query Frame = 2
Query:  191 NCSKSPADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMI------NXIPGS--EEAAKRLMXEAYQRG--SADNITCVVCSVLGNQ 751
            N  ++    +   D +    E  ++  +G+TA   ++    +   N GDSRAV    G A  +S DHKP    E +RI  AGG   W    RV G LA+SRA GD   K         Q V A P++  + +    EF++LA DG+WDV+TN+E V  +         P S  EE   R +    Q G    DN+T V+  +L  Q
Sbjct:   88 NMKEAIEKGFLELDQQMRVDEETKDDVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGG---WVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICEELLTRCLAPDCQMGGLGCDNMTVVLVGLLHGQ 290          

HSP 2 Score: 28.8758 bits (63), Expect = 3.386e-20
Identity = 10/28 (35.71%), Postives = 18/28 (64.29%), Query Frame = 3
Query:   12 VFDGHGGARAAEYVKHNLFSNLIRHPKF 95
            V+DGHGG++ ++Y   NL   ++   +F
Sbjct:   57 VYDGHGGSKVSQYSGINLHKKVVAQKEF 84          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.100e-20
Identity = 65/177 (36.72%), Postives = 92/177 (51.98%), Query Frame = 2
Query:  239 FLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMIN----XIPGSEEAAKRLMXEAYQRGSADNITCVV 730
            F    N  +R +GSTA   ++    +   N GDSRAV+CR G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E +     EF++LA DG+WDV++NEE    +N         E     ++     +GS DN++ V+
Sbjct:  120 FSDLRNGMDR-SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVL 292          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 5.695e-20
Identity = 65/157 (41.40%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  212 DAYSHTDSEFLKSENNQNRDAGSTASTAILVGDR---LLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXEEVID-SSLEFLILASDGLWDVVTNEEAVAMIN 643
            D +  TD E LK E  ++  +G TA T ILV      L+ AN GDSR V+  GGN+ A+S DHKP    E+ RI  A GFV      RV G LA+SRA GD   K         Q V   P+I    ++    EF+ILA DG+WD +T++E V +++
Sbjct:   98 DTFLATDVELLKDEKLKDDHSGCTA-TVILVSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRIVAADGFVEMD---RVNGNLALSRAIGDFEFKSNTKLGPHEQVVTCVPDIICHNLNYDEDEFVILACDGIWDCLTSQECVDLVH 250          

HSP 2 Score: 28.1054 bits (61), Expect = 5.695e-20
Identity = 12/30 (40.00%), Postives = 17/30 (56.67%), Query Frame = 3
Query:   12 VFDGHGGARAAEYVKHNLFSNLIRHPKFIS 101
            +FDGHGG+  AE+    + S L +   F S
Sbjct:   60 IFDGHGGSSVAEFCGSKMISILKKQESFKS 89          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: P2C08_ARATH (Probable protein phosphatase 2C 8 OS=Arabidopsis thaliana GN=At1g18030 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 7.454e-20
Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 2
Query:  200 KSPADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRG------GN---------AIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQY-VVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMINXIPGS----EEAAKRLMXEAY-QRGSADNITCVV 730
            K+  + +  TD   L+   +     G+TA    ++  ++ VAN+GD++AV+ R       GN         AI ++R+HK     ER RI+ +GG +   G  R+ G L VSRAFGDR  K++ V A P+I    +     F+IL  DGLW+V    +AV  +  +          ++RL+ EA  +R   DN T +V
Sbjct:  150 KAILEGFRKTDELLLQKSVSGGWQDGATAVCVWILDQKVFVANIGDAKAVLARSSTTNELGNHTEAGNPLKAIVLTREHKAIYPQERSRIQKSGGVISSNG--RLQGRLEVSRAFGDRHFKKFGVSATPDIHAFELTERENFMILGCDGLWEVFGPSDAVGFVQKLLKEGLHVSTVSRRLVKEAVKERRCKDNCTAIV 345          

HSP 2 Score: 31.5722 bits (70), Expect = 7.454e-20
Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = 3
Query:   12 VFDGHGGARAAEYVKHNLFSNLIRH--PKFISDTKSAIGYIL 131
            ++DGHGG  AAE+ K +L  N++    P+ + D K A   IL
Sbjct:  112 IYDGHGGRLAAEFAKKHLHLNVLSAGLPRELLDVKVAKKAIL 153          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.133e-20
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = 2
Query:  227 TDSEFLKSEN-------NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMI 640
            TD + + ++N          +D+G TA   +L G  L VAN GDSR VI R G AI +S DHKP+  +E  RI  AGG V   G  RV G L +SRA GD   K         Q + A P+I + +I    EF++LA DG+W+ +++EE V  +
Sbjct:  370 TDEDQMANDNFCANMIEEPGKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSGQAIEMSIDHKPEDDEEASRIIKAGGRVTLDG--RVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIWNYMSSEEVVEFV 521          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: YR307_MIMIV (PP2C-like domain-containing protein R307 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R307 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.193e-19
Identity = 58/168 (34.52%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  308 DRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGG-------FVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMIN-----------XIPG---------SEEAAKRLMXEAYQRGSADNITCVV 730
            + + V N+GD RAV+C+ G AI +++DHKP   DE++RI+               AG WR+G  L+VSR+FGD     YV   P++ +  + S  EF+I+A DG+WDV+ N EA+  +             IPG         S+  +++L   A  RGS DN++ ++
Sbjct:    7 ENIQVINIGDCRAVLCKNGLAIPLNKDHKPIWPDEKRRIDRVNEKYETNEKIHFDAGDWRIGD-LSVSRSFGDLDNTPYVTHVPDLFDYQLQSDDEFIIMACDGVWDVLENHEAINFVRDHRNDNHTEFYSIPGKYPNREAFESDNISRKLASYAIARGSTDNVSVII 173          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.193e-19
Identity = 65/177 (36.72%), Postives = 92/177 (51.98%), Query Frame = 2
Query:  239 FLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEE----AVAMINXIPGSEEAAKRLMXEAYQRGSADNITCVV 730
            F    N  +R +GSTA   ++    +   N GDSRAV+CR G     ++DHKP    E++RI++AGG VM     RV G LAVSRA GD   K         Q V  +PE+ E V     EF++LA DG+WDV++NEE      + +      E     ++     +GS DN++ V+
Sbjct:  120 FSDLRNGMDR-SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSVVL 292          
BLAST of EY661049 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.193e-19
Identity = 63/158 (39.87%), Postives = 86/158 (54.43%), Query Frame = 2
Query:  269 DAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLL---------KQYVVADPEIXEEVIDSSLEFLILASDGLWDVVTNEEAVAMINXIPGSEEAAKRLMXEAYQRGSADN 715
            ++GSTA  A++   +L VAN GDSR VI R   A  +SRDHKPD   E++RI  AGGF+  AG  RV G L +SRA GD            KQ V A P++    +    +FL+LA DG+WD +T+++ V  I+    SE     +  +   R  A N
Sbjct:  158 NSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFI-HAG--RVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDCMTSQQLVDFIHEQLNSETKLSVVCEKVLDRCLAPN 312          
The following BLAST results are available for this feature:
BLAST of EY661049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
P2C73_ARATH1.409e-2035.29Probable protein phosphatase 2C 73 OS=Arabidopsis ... [more]
PP2C2_YEAST2.589e-2038.41Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]
PP2C2_CAEEL3.386e-2033.01Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
PPM1B_RAT4.100e-2036.72Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PP2C3_YEAST5.695e-2041.40Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
P2C08_ARATH7.454e-2032.32Probable protein phosphatase 2C 8 OS=Arabidopsis t... [more]
Y0417_DROME9.133e-2039.61Probable protein phosphatase CG10417 OS=Drosophila... [more]
YR307_MIMIV1.193e-1934.52PP2C-like domain-containing protein R307 OS=Acanth... [more]
PPM1B_MOUSE1.193e-1936.72Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
P2C60_ARATH1.193e-1939.87Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-H02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661049 ID=EY661049; Name=EY661049; organism=Citrus sinensis; type=EST; length=927bp
CCACGCGTCCGGTTTTTGATGGTCATGGGGGTGCACGAGCTGCTGAGTAT
GTGAAACACAACCTCTTCAGCAATCTGATCAGGCATCCAAAGTTCATATC
TGATACCAAATCGGCAATAGGTTATATACTTTGTAACTAATAATGTTCTA
TAAGTTTAGTTTTCATCATACTGATTTCTTGCTTTTCTATAATTGCTCCA
AATCTCCAGCTGATGCATACAGCCACACAGACTCGGAATTTCTGAAGTCA
GAAAACAATCAAAACAGGGATGCTGGATCTACTGCTTCCACTGCCATCCT
TGTTGGTGATCGCTTACTTGTTGCAAATGTGGGTGACTCCAGAGCTGTTA
TATGCAGGGGCGGTAATGCTATTGCCGTATCGCGAGATCACAAACCAGAC
CAAACAGATGAGCGTCAACGGATTGAGGATGCAGGAGGGTTTGTGATGTG
GGCTGGAACTTGGAGAGTGGGAGGAGTTCTTGCCGTTTCTCGCGCATTTG
GTGACAGACTCTTGAAGCAGTATGTTGTTGCTGATCCCGAAATTCANGAG
GAAGTTATTGACAGCTCCCTTGAGTTTCTTATCCTTGCAAGTGATGGACT
TTGGGATGTCGTCACAAATGAAGAAGCTGTTGCGATGATCAACCNNATCC
CAGGATCAGAGGAGGCAGCGAAGAGGCTGATGCANGAGGCATATCAAAGA
GGCAGCGCAGACAACATCACCTGTGTCGTTTGTTCGGTTCTTGGCAATCA
AGGTGGTTCATCCTTTCCTGGCTCTGCATGAACATCCTTTCATAGGCACC
GCTCTGCTTTTGTTCTCTACATGGGCATCCCTTCAGTGGTCTACAGCTAG
TAGTCATAAAAAAATTACAGNTTCCGTTGACTTTGAAATGATGAAACATG
ACAAAAGCTTACCCGGGCGTAATGTGG
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