EY661006

Overview
NameEY661006
Unique NameEY661006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.963e-37
Identity = 84/164 (51.22%), Postives = 109/164 (66.46%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDT-SYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAID-GSCDTYR-KNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGXGMAFQLYESGIFTGRCGTSL-DHGVTAVGYGTENG-ADYWIVKN 777
            GSCWAF+   AVEGIN+I TG L+SLSEQEL+DCD  + N GC GG   +AFEFI +NGGI ++E Y Y   D  +C     K  +VVTI+ +E VP+NDE +L+KAVA QP+SV I    M+   Y+SG++ G C     DH V  VGYGT +   DYW+++N
Sbjct:  150 GSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMISAANMSD--YKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRN 311          

HSP 2 Score: 24.6386 bits (52), Expect = 3.963e-37
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 2
Query:  794 GRAGYIRMERNVLDSHGQC 850
            G  GY+R++RN  +  G+C
Sbjct:  318 GEGGYLRLQRNFHEPTGKC 336          

HSP 3 Score: 20.7866 bits (42), Expect = 3.963e-37
Identity = 6/8 (75.00%), Postives = 6/8 (75.00%), Query Frame = 3
Query:  777 SWGSSWGE 800
            SWG  WGE
Sbjct:  312 SWGPEWGE 319          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 4.980e-37
Identity = 78/163 (47.85%), Postives = 105/163 (64.42%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQ-PVSVAIEGXGMAFQLYESGI-FTGRCGTSLDHGVTAVGYGTENGADYWIVKN 777
            G+CWAFS + A+E   K+ TG L+SLS Q LVDC T    N+GCNGG M  AF++IIDN GID++  YPYKA+D  C  Y    +  T   Y ++P   E  L++AVAN+ PVSV ++    +F LY SG+ +   C  +++HGV  VGYG  NG +YW+VKN
Sbjct:  137 GACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQ-YDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKN 298          

HSP 2 Score: 21.557 bits (44), Expect = 4.980e-37
Identity = 9/15 (60.00%), Postives = 9/15 (60.00%), Query Frame = 2
Query:  782 GQ*LGRAGYIRMERN 826
            G   G  GYIRM RN
Sbjct:  301 GHNFGEEGYIRMARN 315          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.724e-36
Identity = 86/172 (50.00%), Postives = 108/172 (62.79%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGXGMAFQLYESGI-FTGRCG-TSLDHGVTAVGYGTENGADYWIVKNHGAVAGESW 804
            GSCWAFS   A+EG + +    L+SLSEQ+LVDC T Y N+GC GG M  AF++I DNGGIDTE  YPY+A D SC     +   +     E    + E+ALQ+AV+   P+SVAI+    +FQ Y SG+ +   C  T LDHGV AVGYGTE+  DYW+VKN     G SW
Sbjct:  128 GSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVE--VQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSW---GSSW 294          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.724e-36
Identity = 82/168 (48.81%), Postives = 109/168 (64.88%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGXGMAFQLYESGI-FTGRCGTS-LDHGVTAVGYGTENGADYWIVKNHGAVA 792
            GSCWAFST  ++EG + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF++I  N GIDTE  YPY+A DGSC  +  N+   T   + ++    E  LQ+AV +  P+SV I+    +FQ Y SG+ +   C  S LDH V AVGYG+E G D+W+VKN  A +
Sbjct:  129 GSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSC-RFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATS 295          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36
Identity = 89/176 (50.57%), Postives = 109/176 (61.93%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGXGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNHGAVAGESW 804
            GSCWAFS    +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF++I +NGG+D+EE YPY+A DGSC  YR    V     + D+P   EKAL KAVA   P+SVA++    + Q Y SGI +   C +  LDHGV  VGYG E    N   YW+VKN     G+ W
Sbjct:  136 GSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC-KYRAEYAVANDTGFVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSW---GKEW 306          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36
Identity = 87/167 (52.10%), Postives = 108/167 (64.67%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGXGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKN 777
            GSCWAFS    +EG   + TG LISLSEQ LVDC  +  N+GCNGGLMD+AF++I +NGG+D+EE YPY+A DGSC  YR    V     + D+P   EKAL KAVA   P+SVA++    + Q Y SGI +   C + +LDHGV  VGYG E    N   YW+VKN
Sbjct:  136 GSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSC-KYRAEFAVANDTGFVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKN 300          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36
Identity = 88/176 (50.00%), Postives = 108/176 (61.36%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGXGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNHGAVAGESW 804
            GSCWAFS   A+EG     TG L+SLSEQ LVDC     NEGCNGGLMDYAF+++ DNGG+D+EE YPY+A + SC  Y     V     + D+P   EKAL KAVA   P+SVAI+    +F  Y+ GI F   C +  +DHGV  VGYG E    + + YW+VKN     GE W
Sbjct:  136 GSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESC-KYNPEYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNSKYWLVKNSW---GEEW 306          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 2.487e-36
Identity = 77/158 (48.73%), Postives = 97/158 (61.39%), Query Frame = 1
Query:  304 SCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGXGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKN 777
            SCWAFST+A VEGINKI TG+L+ LSEQELVDCD   + GCN G    + +++  NG I     YPY A   +C   +     V  +    V  N+E +L  A+A+QPVSV +E  G  FQ Y+ GIF G CGT +DH VTAVGYG   G  Y ++KN
Sbjct:  156 SCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ-SYGCNRGYQSTSLQYVAQNG-IHLRAKYPYIAKQQTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGKSGGKGYILIKN 311          

HSP 2 Score: 24.2534 bits (51), Expect = 2.487e-36
Identity = 11/26 (42.31%), Postives = 16/26 (61.54%), Query Frame = 2
Query:  794 GRAGYIRMERNVLDSHGQCELHGASY 871
            G  GYIR+ R   +S G C ++ +SY
Sbjct:  318 GENGYIRIRRASGNSPGVCGVYRSSY 343          

HSP 3 Score: 21.1718 bits (43), Expect = 2.487e-36
Identity = 6/10 (60.00%), Postives = 7/10 (70.00%), Query Frame = 3
Query:  771 EKSWGSSWGE 800
            + SWG  WGE
Sbjct:  310 KNSWGPGWGE 319          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.459e-35
Identity = 81/173 (46.82%), Postives = 110/173 (63.58%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC--DTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGXGMAFQLYESGI-FTGRCGTS-LDHGVTAVGYGTENGADYWIVKNHGAVA-GES 801
            GSCWAFST   +EG + + TG L+SLSEQ+LVDC   + YN+GCNGG ++ A  ++ DNGG+DTE  YPY+A D +C  +  N    T   Y  +    E AL+ A  +  P+SVAI+    +FQ Y +G+ +   C +S LDH V AVGYG+E G D+W+VKN  A + GES
Sbjct:  127 GSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTC-RFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWATSWGES 298          
BLAST of EY661006 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.459e-35
Identity = 89/176 (50.57%), Postives = 107/176 (60.80%), Query Frame = 1
Query:  301 GSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVAN-QPVSVAIEGXGMAFQLYESGI-FTGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNHGAVAGESW 804
            GSCWAFS   A+EG     TG LISLSEQ LVDC     NEGCNGGLMDYAF+++ DNGG+D+EE YPY+A + SC  Y     V     + D+P   EKAL KAVA   P+SVAI+    +F  Y+ GI F   C +  +DHGV  VGYG E    +   YW+VKN     GE W
Sbjct:  136 GSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESC-KYNPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSW---GEEW 306          
The following BLAST results are available for this feature:
BLAST of EY661006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
CPR2_ARATH3.963e-3751.22Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATS_HUMAN4.980e-3747.85Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CYSP3_HOMAM1.724e-3650.00Digestive cysteine proteinase 3 OS=Homarus america... [more]
CYSP2_HOMAM1.724e-3648.81Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATL1_RAT2.252e-3650.57Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATL1_MOUSE2.252e-3652.10Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_CERAE2.252e-3650.00Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
PAPA4_CARPA2.487e-3648.73Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP1_HOMAM1.459e-3546.82Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATL1_HUMAN1.459e-3550.57Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661006 ID=EY661006; Name=EY661006; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGCAATGAGAGATATTAAACATTTTATGTCCTACAAGTCTT
TTGCGGTCTTATTCAACCTCAATCCATCATTCTGAACAAACTTAATAACT
CAGAATTATATGAAGTGATGATTTTTTTTCCCCTACCTAACTTTTGTAGG
TAATAAATCAACTGATGTAGATACAAAACATATTCAAATATTGAGTTGTC
TAAGTACTTAACTTGGTTAGAAATTCAGAAAGCAAATTATCTGTTGCTCT
CTGTGTCGTGTGATTCTAACCATTATTTGATTGTATCTCGCTTGAATGAA
GGGAGTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAA
GATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATT
GTGATACATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCA
TTCGAGTTCATTATTGATAATGGAGGTATTGACACAGAAGAAGATTACCC
CTACAAAGCCATTGATGGTAGCTGTGACACATATCGGAAAAATGCCAAAG
TAGTTACAATTGATGACTATGAAGATGTTCCCCTAAATGACGAGAAAGCT
TTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCCATTGAAGGANG
TGGCATGGCATTCCAGTTATATGAATCGGGTATATTTACGGGAAGATGTG
GGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATGGCACAGAAAAT
GGAGCTGATTACTGGATTGTGAAAAATCATGGGGCAGTAGCTGGGGAGAG
CTGGCTATATTAGGATGGAGCGTAACGTGCTGGACTCTCACGGGCAGTGT
GAATTGCATGGAGCCTCATATCCCTAAGAAAGGCAA
back to top