EY661004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 5.126e-57 Identity = 116/198 (58.59%), Postives = 141/198 (71.21%), Query Frame = 2 Query: 203 WYGPDRVKYLGPFSAQ-TPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPG--VGEGTTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 +YGPDR K+LGPFS TP YLTGEFPGDYGWDTAGLSADP+ FAR R +E+IH RWA+LGALG +TPE+L ++ V F EPVWFKAGAQIF++GGL+YLGN +L+HAQSI+A L VVLMGL E +R NG + + TLY F G ADDP T AE +VKEI+ FSCL + + K P++NL Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNL 230
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.948e-56 Identity = 120/197 (60.91%), Postives = 140/197 (71.07%), Query Frame = 2 Query: 203 WYGPDRVKYLGPFSAQ-TPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEG-TTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 +YGP+R K+LGP+S TP+YLTGEFPGDYGWDTAGLSADPE F R R LE+IH RWAMLGALGC TPE+L K F E VWFKAGAQIFSEGGLDYLGNP+LVHAQ+I+A V+LMGL+EG+R+NG P GEG LY F G ADDP T AE +VKEI+ FS + + K P++NL Sbjct: 36 FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAK-SGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGP-AGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNL 230
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.263e-55 Identity = 119/204 (58.33%), Postives = 137/204 (67.16%), Query Frame = 2 Query: 176 AKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEGTTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 AK + WYG DRV YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E WFKAG+QIFS+GGLDYLGNP+LVHAQS+LA+ VVLMG VEG+RI G P LY F G A+ P AE +VKEI+ FS + + K PLE+L Sbjct: 41 AKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDL 243
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.865e-53 Identity = 115/185 (62.16%), Postives = 131/185 (70.81%), Query Frame = 2 Query: 236 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEGT-TLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 PFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVIH WAMLGALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ VVLMG VEG+RI G P +GE T +Y F G ADDP AE +VKE++ FS + + K PLENL Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 183
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.307e-52 Identity = 123/228 (53.95%), Postives = 145/228 (63.60%), Query Frame = 2 Query: 107 ATPFLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEGT-TLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 +TP LG R + ++ P K WYGPDRVKYLGPFS + PSYLTGEF G LSADPE FA+NR LEVIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ V+LMG VEG+RI G P +GE T +Y F G ADDP AE +VKE++ FS + + K PLENL Sbjct: 23 STPELGVGRVS---MRKTAP----KTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP-LGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 233
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.911e-52 Identity = 123/216 (56.94%), Postives = 139/216 (64.35%), Query Frame = 2 Query: 218 RVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEGTTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL-----WTP*NPVATMLGPCYQFVPGS 847 RVKYLGPFS + PSYLTGEFPGDYGWDTAGLSA PE FA+NR LEVIH R AM ALGCI PE+L + F E VWFKAGAQIFSEGGLDYLGNP+LVHAQSILA+ V+LMG VEG+RI P +GE T F S G A+D AE +VKE++ FS + + RK LENL WT N L FVPG+ Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSV-MGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGP-LGEVTDPLYPGSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNN---NALSNVTNFVPGN 268
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.218e-51 Identity = 111/195 (56.92%), Postives = 127/195 (65.13%), Query Frame = 2 Query: 203 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEGTTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 WYG DRV YLGP S PSYLTGEFPGDYGWDT GLSADPE FA+NR LEVIH RWA+ LGC+ PE+L + V F E VWFKAG+QIFSEGGL + GNP+LVHAQSILA+ VVLMG VEG+ + G LYL F G DDP AE +VKEI+ FS + + K P+ENL Sbjct: 48 WYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLAR-NGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL 241
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 4.071e-46 Identity = 106/197 (53.81%), Postives = 128/197 (64.97%), Query Frame = 2 Query: 203 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEP-VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEG-TTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 +YGPD Q P TGEFPGDYGWDTAGLSADPE F R R LE+IH R +LGALG +TPE+L + F + +WFKAGA IF +GGL+YLGNP+L+HAQ+I+A L VVLMGLVEG+R+NG P GEG LY F G ADDP T AE +VKEI+ F+CL + + K P+ENL Sbjct: 57 FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGP-AGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENL 251
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.961e-25 Identity = 68/122 (55.74%), Postives = 80/122 (65.57%), Query Frame = 2 Query: 428 VDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEG-TTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENLW 787 V F E VWFKAGAQIFSEGGLDYLGNPNL+HAQSILA+ VVLMGL+EG+R+ G P +GEG LY F G ADDP AE +VKEI+ FS + + K P+ENL+ Sbjct: 8 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGP-LGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLY 128
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25 Identity = 79/198 (39.90%), Postives = 103/198 (52.02%), Query Frame = 2 Query: 203 WYGPDRVKYLGPF---SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEGTTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 WYGPDR +L ++ P YL GE GDYG+D GL PE FA+ +A E+IH RWAMLGA G I PE L K+ E VWFK GA + L+Y G + +LAV+ VVL+G E +RI G+ L+ F G A DP A +VKEI+ F+ L + +Y + P+ENL Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEYYRITN--GLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENL 254 The following BLAST results are available for this feature:
BLAST of EY661004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661004 ID=EY661004; Name=EY661004; organism=Citrus sinensis; type=EST; length=885bpback to top |