EY661004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.322e-12 Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 2 Query: 242 SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQI 472 +A+ P+ LTGE+P D G+D L+ADP+ +AR R EV HGR AML +GCI PE+L K WF+AG + Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK--------GAWFEAGDSV 261
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.846e-12 Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 2 Query: 116 FLGQSRTTANALKDVVPMGNAKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQ 469 FLG R + K + P+G+ + + + PDR + + P +L G PGD+G+D GL +DPE+ N E++H RWAMLGA G PE L K + V P W+ AG Q Sbjct: 34 FLGGKRLRVS--KFIAPVGSRSVAV-SAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTK-IGV-LNTPSWYTAGEQ 144
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.461e-11 Identity = 46/101 (45.54%), Postives = 56/101 (55.45%), Query Frame = 2 Query: 488 LDYLGNPNLVHAQSILAVLRFPVVLMGLVEGFRINGPPGVGEG-TTLYLVAIF*SPGPADDPVTXAETQVKEIRMAG*LXFSCL-VSLPSYCDRKSPLENL 784 LDYLGNP+LVHAQSILA+ V+LMG VEG+R+ G +GE LY F DP AE +VKEI+ FS + + K PLENL Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 101
BLAST of EY661004 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11 Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 254 PSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQ 469 P +L G PGD+G+D GL++DPE+ N+ E++H RWAMLGA G PE+L K + + P W+ AG Q Sbjct: 75 PPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTK-IGI-LNTPSWYTAGEQ 144 The following BLAST results are available for this feature:
BLAST of EY661004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661004 ID=EY661004; Name=EY661004; organism=Citrus sinensis; type=EST; length=885bpback to top |