EY661003

Overview
NameEY661003
Unique NameEY661003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_GEOLS (Phosphoglycerate kinase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pgk PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.218e-29
Identity = 58/98 (59.18%), Postives = 77/98 (78.57%), Query Frame = 1 
Query:  370 DLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            DLKGKKVF+R D NVP D+  NIT+DTRI  AVPTIK+ ++ GAKV+L+SHLGRPKG    K+++AP   RLS+LLG +V++A DC GP+V K++ S+
Sbjct:   11 DLKGKKVFIRVDFNVPQDEKGNITEDTRIAGAVPTIKYAVEQGAKVVLASHLGRPKGEKKSKYTMAPAAKRLSQLLGKKVMQAPDCFGPDVSKIIDSM 108

HSP 2 Score: 26.1794 bits (56), Expect = 2.218e-29
Identity = 14/39 (35.90%), Postives = 22/39 (56.41%), Query Frame = 2 
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLRE-SQIFEASGAGF 847
            Q+L    ++YVNDAF  +HR   S+   +++     AGF
Sbjct:  134 QQLVNGCEIYVNDAFAVSHRAHASVEAITKLVPTIAAGF 172

HSP 3 Score: 21.9422 bits (45), Expect = 2.218e-29
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 3 
Query:  714 KNDPEFAKSLAS 749
            KNDPEFA+ L +
Sbjct:  127 KNDPEFAQQLVN 138
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_ANASK (Phosphoglycerate kinase OS=Anaeromyxobacter sp. (strain K) GN=pgk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.304e-29
Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = 1 
Query:  358 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV---TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            +   DL GK+VF+R D NVPLD    +TDD RIRAA+PTI+H IQ  AKVIL+SHLGRPKG      K +L P   RLSELL   V+ ADDC+G  V+KLV  L
Sbjct:    6 IDALDLAGKRVFIRVDFNVPLDPQGRVTDDARIRAALPTIRHAIQAKAKVILASHLGRPKGKPDDRQKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDL 109

HSP 2 Score: 35.4242 bits (80), Expect = 3.304e-29
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 2 
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            +EL  LAD++VNDAFGTAHR   S    ++  +   AGF
Sbjct:  135 RELASLADVWVNDAFGTAHRAHASTAGMARFVKEKAAGF 173
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_ANADE (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=pgk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.304e-29
Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = 1 
Query:  358 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV---TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            +   DL GK+VF+R D NVPLD    +TDD RIRAA+PTI+H IQ  AKVIL+SHLGRPKG      K +L P   RLSELL   V+ ADDC+G  V+KLV  L
Sbjct:    6 IDALDLAGKRVFIRVDFNVPLDPQGKVTDDARIRAALPTIRHAIQAKAKVILASHLGRPKGKPDDRTKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDL 109

HSP 2 Score: 35.4242 bits (80), Expect = 3.304e-29
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 2 
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            +EL  LAD++VNDAFGTAHR   S    ++  +   AGF
Sbjct:  135 RELASLADVWVNDAFGTAHRAHASTAGMAKFVKEKAAGF 173
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_PROM5 (Phosphoglycerate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=pgk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.300e-29
Identity = 59/102 (57.84%), Postives = 74/102 (72.55%), Query Frame = 1 
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPE 636
            M+K S+  L  + L+GKKV VR D NVPL+D+  ITDDTRIRAA+PTIK+LI N AKVIL++H GRPKG V  +  L P+  RLSE+LG +V   + CIG E
Sbjct:    1 MSKLSLSSLDKSKLEGKKVLVRVDFNVPLNDDGQITDDTRIRAAIPTIKYLINNSAKVILAAHFGRPKGKVNERMRLTPIAARLSEILGKKVNLTESCIGEE 102

HSP 2 Score: 34.6538 bits (78), Expect = 4.300e-29
Identity = 19/39 (48.72%), Postives = 24/39 (61.54%), Query Frame = 2 
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            + L   AD+YVNDAFG AHR   S +  ++  E S AGF
Sbjct:  136 KNLAAHADMYVNDAFGAAHRAHASTQGVTKFLEPSVAGF 174
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_GEOMG (Phosphoglycerate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pgk PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.854e-29
Identity = 63/110 (57.27%), Postives = 81/110 (73.64%), Query Frame = 1 
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV-TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            MA + + E+    LKGKKVF+R D NVPLD++QNIT+DTRIRA +PTI   +  GAKVIL+SHLGRPKG   PK+S+AP   RLS LL  +V  A DCIG EV+K++ ++
Sbjct:    1 MAIRYIDEIES--LKGKKVFIRVDFNVPLDEHQNITEDTRIRAVLPTINFALDAGAKVILASHLGRPKGERKPKYSMAPAAKRLSRLLNKEVQLAPDCIGDEVKKMIDAM 108

HSP 2 Score: 27.335 bits (59), Expect = 4.854e-29
Identity = 12/32 (37.50%), Postives = 19/32 (59.38%), Query Frame = 2 
Query:  755 DLYVNDAFGTAHRPMPSLRE-SQIFEASGAGF 847
            ++Y+NDAF  +HR   S+   ++ F    AGF
Sbjct:  141 EIYINDAFAVSHRAHASVEAITKFFPVVAAGF 172

HSP 3 Score: 21.1718 bits (43), Expect = 4.854e-29
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3 
Query:  714 KNDPEFAKSLAS 749
            KND +FAK+LA+
Sbjct:  127 KNDADFAKALAN 138
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_CHLP8 (Phosphoglycerate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=pgk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 5.600e-29
Identity = 61/110 (55.45%), Postives = 81/110 (73.64%), Query Frame = 1 
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            M KK++ ++S   L+GK+V +R D NVPLD ++NITDD RI  A+P+I+ +I+ G ++IL SHLGRPKG V P FSLAP   RLSELLG+ V  A+DCIG EV + V +L
Sbjct:    1 MQKKTLSDIS---LQGKRVLMRVDFNVPLDQDRNITDDKRIVGALPSIRKVIEEGGRLILMSHLGRPKGKVNPAFSLAPAAKRLSELLGMPVTMANDCIGTEVMQEVLAL 107

HSP 2 Score: 33.4982 bits (75), Expect = 5.600e-29
Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 2 
Query:  734 QELGLLADLYVNDAFGTAHR 793
            +EL  + ++YVNDAFGTAHR
Sbjct:  133 RELASMGEIYVNDAFGTAHR 152
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_ANAD2 (Phosphoglycerate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pgk PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.493e-29
Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = 1 
Query:  358 LSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKGV---TPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            +   +L GK+VF+R D NVPLD    +TDD RIRAA+PTI+H IQ  AKVIL+SHLGRPKG      K +L P   RLSELL   V+ ADDC+G  V+KLV  L
Sbjct:    6 IDALELAGKRVFIRVDFNVPLDPQGRVTDDARIRAALPTIRHAIQAKAKVILASHLGRPKGKPEDRQKLTLEPAAVRLSELLSQDVILADDCVGDGVKKLVRDL 109

HSP 2 Score: 35.4242 bits (80), Expect = 9.493e-29
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 2 
Query:  734 QELGLLADLYVNDAFGTAHRPMPSLR-ESQIFEASGAGF 847
            +EL  LAD++VNDAFGTAHR   S    ++  +   AGF
Sbjct:  135 RELASLADVWVNDAFGTAHRAHASTAGMARFVKEKAAGF 173
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_BACCZ (Phosphoglycerate kinase OS=Bacillus cereus (strain ZK / E33L) GN=pgk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 9.494e-29
Identity = 61/110 (55.45%), Postives = 83/110 (75.45%), Query Frame = 1 
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP V+++VA++
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPAVQEMVAAM 106

HSP 2 Score: 33.113 bits (74), Expect = 9.494e-29
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 2 
Query:  728 VCQELGLLADLYVNDAFGTAHR 793
            + +E   LAD++VNDAFG AHR
Sbjct:  130 LAKEFAALADIFVNDAFGAAHR 151
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_BACC1 (Phosphoglycerate kinase OS=Bacillus cereus (strain ATCC 10987) GN=pgk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 9.494e-29
Identity = 61/110 (55.45%), Postives = 83/110 (75.45%), Query Frame = 1 
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASL 660
            M KKS+ ++   DLKGK+VF R D NVP+ + + ITD+TRIRAA+PTI++L++ GAKVIL+SHLGRPKG V  +  L P+  RL ELLG  V KAD+  GP V+++VA++
Sbjct:    1 MNKKSIRDV---DLKGKRVFCRVDFNVPMKEGK-ITDETRIRAALPTIQYLVEQGAKVILASHLGRPKGQVVEEMRLTPVAARLGELLGKDVKKADEAFGPAVQEMVAAM 106

HSP 2 Score: 33.113 bits (74), Expect = 9.494e-29
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 2 
Query:  728 VCQELGLLADLYVNDAFGTAHR 793
            + +E   LAD++VNDAFG AHR
Sbjct:  130 LAKEFAALADIFVNDAFGAAHR 151
[Close]
BLAST of EY661003 vs. ExPASy Swiss-Prot
Match: PGK_PROMA (Phosphoglycerate kinase OS=Prochlorococcus marinus GN=pgk PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.096e-28
Identity = 76/165 (46.06%), Postives = 93/165 (56.36%), Query Frame = 1 
Query:  334 MAKKSVGELSGADLKGKKVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQNGAKVILSSHLGRPKG-VTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPXXXXXXXXXXXXXXXXXKTILSLPRAW-PLGRSLCQ*CFWDRSQTHALTEGVTN 822
            MAK+S+  LS  DL GK+V VR D NVPL++  +ITDDTRIRAA+PTI+HLI+  A+VILS+H GRPKG V     L P+  RLSELLG  VVK + CIGP+ EK V  +                  K      +    L        F    + HA TEGVTN
Sbjct:    1 MAKRSLSNLSVEDLCGKRVLVRVDFNVPLNEEGSITDDTRIRAALPTIQHLIEKEARVILSAHFGRPKGKVNEDMRLTPVSQRLSELLGKTVVKTESCIGPDAEKKVHEMSNGDVVLLENVRFIGEEEKNDSEFAKKLASLAEVYVNDAFGAAHRAHASTEGVTN 165
The following BLAST results are available for this feature:
BLAST of EY661003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_GEOLS2.218e-2959.18Phosphoglycerate kinase OS=Geobacter lovleyi (stra... [more]
PGK_ANASK3.304e-2957.69Phosphoglycerate kinase OS=Anaeromyxobacter sp. (s... [more]
PGK_ANADE3.304e-2957.69Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_PROM54.300e-2957.84Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]
PGK_GEOMG4.854e-2957.27Phosphoglycerate kinase OS=Geobacter metallireduce... [more]
PGK_CHLP85.600e-2955.45Phosphoglycerate kinase OS=Chlorobaculum parvum (s... [more]
PGK_ANAD29.493e-2956.73Phosphoglycerate kinase OS=Anaeromyxobacter dehalo... [more]
PGK_BACCZ9.494e-2955.45Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_BACC19.494e-2955.45Phosphoglycerate kinase OS=Bacillus cereus (strain... [more]
PGK_PROMA3.096e-2846.06Phosphoglycerate kinase OS=Prochlorococcus marinus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-D04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY661003 ID=EY661003; Name=EY661003; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCATTTTCCTTCCCCATTCTTCAATCAAACCAAAACCCAC
TTCCCATTTCTCCACTTTGTCGACAAAGTTTCAATCTTTTGCGCCTTTAC
TACGCCACTCCACTCCCACCACATCAATGGCTTCAGCCACCGCTCCCACT
ACTTTATCTCTCGTCAAAACCGCCGCAAGTTCATCCCTTTCTTCCCCACG
CGCCTCCTTCCTGCGCATGCCCACTTCAGCATCCCGCAGGCTGGGGTTCT
CCGCAGCCGACCCGCTGCTGACCTGCCATGTGGCGTCGAGGCTGAGCTCG
ATTAAGACGAAGGGCACTCGTGCGGTGGTGTCGATGGCGAAGAAGAGCGT
GGGGGAGTTGAGTGGAGCTGATTTGAAAGGGAAGAAGGTGTTTGTAAGAG
CTGACTTGAATGTGCCTTTGGATGATAATCAGAACATTACTGATGATACT
AGAATCAGAGCTGCTGTTCCCACCATCAAGCATTTGATTCAAAATGGAGC
TAAAGTCATTCTTTCTAGCCACTTGGGAAGACCAAAGGGTGTTACTCCGA
AATTCAGTTTGGCTCCTCTTGTGCCTCGTCTTTCTGAACTCCTGGGCATT
CAGGTTGTGAAGGCTGATGACTGCATTGGTCCAGAGGTAGAAAAGCTTGT
AGCCTCACTTCCTGAAGGCGGTGTTCTTCTTNCTGAAAACGTGNAGGTTC
TACAAGAGGAGGAAAAAACGATCCTGAGTTTGCCAAGAGCTTGGCCTCTT
GGCAGATCTCTATGTCAATGATGCTTTTGGGACCGCTCACAGACCCATGC
CCTCACTGAGGGAGTCACAAATATTTGAAGCTTCTGGTGCTGGGTTCTCT
TGCAGAAGAACTGGACTACCTTGTTGGGGCGTTTTCAGCCCAAGAGCCAT
TTGCTGCCATGGGG
back to top