EY661000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.343e-16 Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 2 Query: 5 MWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 MWKLPM+GCT+A+QVL EV E K YP++F+R+IGFDN RQVQCISF+ KP Sbjct: 135 MWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS2_MESCR (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.754e-16 Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 TMWKLPM+GCTD +QV+ E+ E +K YP +F RIIGFDN RQVQCISF+A KP Sbjct: 123 TMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRIIGFDNVRQVQCISFIAYKP 175
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.992e-16 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 TMWKLPM+G TDA+QVLKE+ EV YP +FVRIIGFDN RQVQCISF+A P Sbjct: 125 TMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.992e-16 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 TMWKLPM+G TDA+QVLKE+ EV YP +FVRIIGFDN RQVQCISF+A P Sbjct: 125 TMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.665e-16 Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 2 Query: 5 MWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 MWKLPM+GCT+A+QV+ EV E K YP +F+R+IGFDN RQVQCISF+ KP Sbjct: 119 MWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.137e-15 Identity = 35/53 (66.04%), Postives = 45/53 (84.91%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 TMW+LP++G TD++QVLKE+ + + EYP SF+RIIGFDN RQVQCISF+A P Sbjct: 125 TMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.369e-15 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 TMWKLPM+G TD QV+KEV EV YP +FVR+IGF+N RQVQCISF+A P Sbjct: 81 TMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTP 133
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.642e-14 Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+G TD QV+ EV EV+K P +FVR IGF++KR+VQCISF+A KP G Sbjct: 68 TMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVRFIGFNDKREVQCISFIAYKPAG 122
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 208 TMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 262 HSP 2 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 352 TMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 406 HSP 3 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 495 TMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 549 HSP 4 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 639 TMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 693 HSP 5 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 782 TMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 836 HSP 6 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 1070 TMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 1124 HSP 7 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 TMWKLPM+GCTDA+QVL+E+ E ++ YP +VR+ FD+ +QVQ ISF+ +P Sbjct: 1214 TMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 1266 HSP 8 Score: 71.633 bits (174), Expect = 1.537e-12 Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 166 TMWKLPM+GCTDA+QVL+E+ E ++ YP +VR + FD+ +QVQ ISF+ +P G Sbjct: 927 TMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISFVVQRPSG 980
BLAST of EY661000 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 2 Query: 2 TMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 160 TMWKLPM+GCTD +QVL+EV Q +P+ ++R++ FDN +QVQC+ FL +P Sbjct: 102 TMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQRP 154 The following BLAST results are available for this feature:
BLAST of EY661000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY661000 ID=EY661000; Name=EY661000; organism=Citrus sinensis; type=EST; length=439bpback to top |