EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SALTY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salmonella typhimurium GN=ispF PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PHOPR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Photobacterium profundum GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 61/127 (48.03%), Postives = 87/127 (68.50%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H+ P+IIGG+ +P+E+G AHSDGDV LH V DA+LGA+G DIG+ FPD+D +WKGA S +++ + + GY +GNLD T+I Q PK++PY + + ++E L D VN Sbjct: 2 RIGHGFDVHKFGGEGPVIIGGVAIPYEQGLIAHSDGDVALHAVCDALLGAIGAGDIGRHFPDTDAEWKGADSRFLLRDVYSKVKDKGYRLGNLDVTIIAQAPKMAPYIDAMCQAIAEDLETDIGNVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MANSM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H PLIIGG+ VP+ G AHSDGDV LH + DA+LGAL L DIG++FPD+D ++K S + ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R ++E L VN Sbjct: 3 RIGHGFDVHAFGEARPLIIGGVEVPYHTGFIAHSDGDVALHALTDALLGALALGDIGKLFPDTDMQFKNIDSRILLREAFRRVQEKGYKIGNVDVTIIAQAPKMRPHIDAMRAVIAEDLQCSVEQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_HAES2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus somnus (strain 2336) GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 60/127 (47.24%), Postives = 91/127 (71.65%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA+ L DIG++FPD+D ++KGA S ++ A + + + GY++GN+D T+I Q PK+ PY +++RT +++ L D VN Sbjct: 3 RIGHGFDVHAFGGEGPIIIGGVAIPYEKGLVAHSDGDVALHALTDALLGAMALGDIGKLFPDTDIQYKGADSRRLLRTAYQAILDKGYQVGNVDITIIAQAPKMRPYIDSMRTVIAQDLHCDIEQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_GEOTN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 61/128 (47.66%), Postives = 89/128 (69.53%), Query Frame = 3 Query: 312 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 FR+G GFD+H+ G PLIIGG+++P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S+ + L+ + GY + N D T+I Q+PK++PY E ++ ++ LL A+ + VN Sbjct: 2 FRIGQGFDVHQFVEGRPLIIGGVHIPYEKGLLGHSDADVLLHAVADACLGAIGAGDIGRHFPDTDPRYKDADSAELLAHVWSLVRQEGYVLVNADCTIIAQKPKMAPYIEEMKKVIARLLEAERSQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ENTS8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 61/127 (48.03%), Postives = 87/127 (68.50%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+I+GG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK++P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGTGPIILGGVRIPYEQGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMAPHIPQMRVFIAEDLGCHMDQVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CLOAB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Clostridium acetobutylicum GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 61/127 (48.03%), Postives = 89/127 (70.08%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 RVG G+D+H+L LI+GG+ + + +G HSD DVL+H ++D+ILGA GL DIG++FPDSD K+KG S +KE L+ + GY+IGN+D+T+I Q+PK+SPY E I+ +L +L D +N Sbjct: 2 RVGIGYDVHKLVENRKLILGGVEIQYSKGLLGHSDADVLVHAIIDSILGAAGLGDIGKLFPDSDNKYKGISSLKLLKEVNALIKDKGYKIGNIDSTIIAQKPKISPYIEDIKKSLCNVLDIDLGSIN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_AZOVD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 60/127 (47.24%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHG+D+HR G + +GG+ +PH G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KG S V ++ V L+ E G+ +GN+DAT++ Q PK++P+ E +R +++E L VN Sbjct: 2 RIGHGYDVHRFAEGDFVTLGGVRIPHRFGLLAHSDGDVLLHALCDALLGAAALGDIGRHFPDTDPRFKGVDSRVLLRHVVALVREKGWRVGNVDATIVAQAPKMAPHIERMRLSIAEDLQVGVEQVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SHISS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shigella sonnei (strain Ss046) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SHIFL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shigella flexneri GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |