EY660988

Overview
NameEY660988
Unique NameEY660988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SALNS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salmonella newport (strain SL254) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG     VN
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SALHS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salmonella heidelberg (strain SL476) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG     VN
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SALCH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salmonella choleraesuis GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG     VN
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPRMRVFIAEDLGCHMDDVN 128
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SALA4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salmonella agona (strain SL483) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG     VN
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_KLEP7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG     VN
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_KLEP3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Klebsiella pneumoniae (strain 342) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG     VN
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_HAES1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus somnus (strain 129Pt) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 60/127 (47.24%), Postives = 90/127 (70.87%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA+ L DIG++FPD+D ++KGA S   ++ A + + + GY++GN+D T+I Q PK+ PY + +RT +++ L  D   VN
Sbjct:    3 RIGHGFDVHAFGGEGPIIIGGVAIPYEKGLVAHSDGDVALHALTDALLGAMALGDIGKLFPDTDIQYKGADSRRLLRTAYQAILDKGYQVGNVDITIIAQAPKMRPYIDAMRTVIAQDLHCDIEQVN 129
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_HAEI8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae (strain 86-028NP) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 63/127 (49.61%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      PLIIGG+ VP+  G  AHSDGDV LH + DAILGA  L DIG++FPD+D ++K A S   ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R  ++E +  D   VN
Sbjct:    3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDILCDIEQVN 129
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ESCF3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG     VN
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
[Close]
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECOSM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ispF PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30
Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 
Query:  315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695
            R+GHGFD+H      P+IIGG+ +P+E+G  AHSDGDV LH + DA+LGA  L DIG++FPD+DP +KGA S   ++EA R +   GY +GN+D T+I Q PK+ P+   +R  ++E LG     VN
Sbjct:    2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYALGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ISPF_SALNS4.320e-3048.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SALHS4.320e-3048.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SALCH4.320e-3048.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_SALA44.320e-3048.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_KLEP74.320e-3048.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_KLEP34.320e-3048.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAES14.320e-3047.242-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_HAEI84.320e-3049.612-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ESCF34.320e-3048.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
ISPF_ECOSM4.320e-3048.822-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-028-B12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGGATACATATCGAGCAGACAGCAGAGCACGAACAGCGTCT
CTCCTCTCTTCGTAAAATTAGATGGTGTTGACGATGGCCGCTCAATCATA
CACCACCACTCCTCTCCACAGCAAAATTACGAATAAGCCACTATGTCCTC
CTCCGTTGAGTTTGAAGCCTCGTAGCTTAACCGCCAAACATCTCCGCACA
ACACAGTCAACGTCGCTGCCTCGTATTTCAGTTTCAGCTGCAGCCATTTC
TTCCATCGAAGTTAAAGAGTCATCGGCTTCGATCCAACCGTCCAAATCAA
AATCACTGCCTTTTCGTGTGGGCCACGGGTTTGATCTTCATAGATTGGAG
CCTGGCTACCCTCTGATCATCGGTGGAATCAATGTTCCCCACGAGAGAGG
CTGCGAGGCTCACTCTGACGGTGATGTTTTGCTTCACTGTGTTGTGGATG
CAATTTTGGGAGCATTGGGTCTTCCTGATATTGGTCAGATATTTCCTGAT
TCTGATCCTAAGTGGAAGGGTGCACCATCCTCTGTTTTTATCAAAGAAGC
TGTGAGACTCATGGATGAGGCCGGCTATGAGATTGGCAACTTGGATGCCA
CGCTGATTCTTCAAAGACCAAAATTGAGCCCATACAAGGAGACTATCCGA
ACCAACTTGTCTGAACTGCTAGGAGCAGACCCCACCGTTGTAAATCTGAA
AGCGAAACTCATGAAAAAGTTGATAGCCTTGGTGAAAATCGAAGTATTGC
AGCTCACACTGTGATCCTTCTCATGAAGAAAGTAAATAAACGATTTGGGA
ATTTGTCTAATGTAGGCAGTGGATCCTATTATCNATGGTGNATTTGTATT
CTGGCTACAAGACTATCCACTGGTATAGATTCCAATGATAGTTTNNGTTC
TACTTGAACATGGCTC
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