EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECOSE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain SE11) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECOLU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECOLI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain K12) GN=ispF PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECOLC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECOL6 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli O6 GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYALGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECOHS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli O9:H4 (strain HS) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECODH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain K12 / DH10B) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECOBW (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli (strain K12 / BW2952) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECO8A (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli O8 (strain IAI1) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ECO81 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Escherichia coli O81 (strain ED1a) GN=ispF PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.320e-30 Identity = 62/127 (48.82%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H P+IIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY +GN+D T+I Q PK+ P+ +R ++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYALGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVN 128 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |