EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PSEA7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.009e-32 Identity = 61/127 (48.03%), Postives = 91/127 (71.65%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KGA S ++ V ++ E G+++GN+DAT++ Q PK++P+ ET+R ++E LG VN Sbjct: 2 RIGHGYDVHRFGEGDYITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVALDQVN 128 HSP 2 Score: 22.7126 bits (47), Expect = 6.009e-32 Identity = 10/28 (35.71%), Postives = 15/28 (53.57%), Query Frame = 2 Query: 698 ESETHEKVDSLGENRSIAAHTVILLMKK 781 ++ T E++ G IA H V LLM + Sbjct: 130 KATTTERLGFTGREEGIAVHAVALLMAR 157
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_HAHCH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Hahella chejuensis (strain KCTC 2396) GN=ispF PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.028e-32 Identity = 60/118 (50.85%), Postives = 87/118 (73.73%), Query Frame = 3 Query: 312 FRVGHGFDLHRL-EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 FR+GHGFD+H E G ++IGG+N+PHERG +AHSDGDVLLH + DA+LGA DIG+ FPD+DP + GA S ++ V + + GY+IGN+D T++ Q PK++P+ E++R N++ Sbjct: 4 FRIGHGFDVHAFSETGDLIVIGGVNIPHERGLQAHSDGDVLLHAICDALLGAAAFGDIGKHFPDTDPSFSGADSRNLLRSVVSKLHQKGYKIGNIDGTIVAQAPKMAPHIESMRVNIA 121
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SALRD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Salinibacter ruber (strain DSM 13855) GN=ispF PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.872e-32 Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 671 R+G G+D+HRL G PLI+GG+ VPH+RG HSD DVLLH V DA+LGA L D+G FPD+D KWK A S ++ V + AGY N+DAT++L+RPKL P+ + +RTN++ L Sbjct: 2 RIGFGYDVHRLVEGRPLILGGVQVPHDRGLAGHSDADVLLHAVADALLGAAALGDLGAHFPDTDAKWKDADSQALLRRVVERVQHAGYAPHNVDATVLLERPKLRPHVDEMRTNIARAL 120
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_LARHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=ispF PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.872e-32 Identity = 62/127 (48.82%), Postives = 92/127 (72.44%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G G+D+HRL G PL++GG+ +P ++G + HSD D L H + DA+ GA L DIG+ FPD+D ++KGA S V ++EAVR + EAG++I N+D+T+I Q P+L+PY E +R++L+ LG P VN Sbjct: 4 RIGQGWDVHRLVEGRPLVLGGVTIPFDKGLDGHSDADALCHAITDALFGAAALGDIGRHFPDTDLEFKGADSRVLLREAVRRVREAGFDIVNVDSTVIAQAPRLAPYVEAMRSHLAADLGLSPDRVN 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BRAHW (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=ispF PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.018e-31 Identity = 58/122 (47.54%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 680 R+G+G+D H LI+ GI +P+E G + HSD D ++H ++D+ILGAL L DIG FPD+D K+KG S V +++ V +M+E YEI N D T+IL++PKL Y +T+R NLS++L D Sbjct: 2 RIGYGYDSHAFAENRKLILSGIEIPYELGLKGHSDADAVIHALIDSILGALALGDIGSHFPDNDSKYKGISSIVLLEKTVSIMEEKNYEISNTDITIILEKPKLRNYIDTMRENLSKILKTD 123 HSP 2 Score: 30.4166 bits (67), Expect = 1.018e-31 Identity = 13/27 (48.15%), Postives = 19/27 (70.37%), Query Frame = 2 Query: 698 ESETHEKVDSLGENRSIAAHTVILLMK 778 +++T+EK+DS+G IA H V LL K Sbjct: 130 KAKTNEKMDSIGRGEGIAVHCVSLLKK 156
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_DINSH (Bifunctional enzyme ispD/ispF OS=Dinoroseobacter shibae (strain DFL 12) GN=ispDF PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.028e-31 Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 + R G+G+D+HR G +I+ G+ VPH+R HSD DV +H V DAI GALG DIGQ FP SDP+WKGA S +F++ AV L E GY I ++D TL+ +RPK+ PY ++ +SEL+G P V+ Sbjct: 242 MDIRTGNGYDVHRFGTGDAVILCGVEVPHDRALMGHSDADVGMHAVTDAIYGALGDGDIGQHFPPSDPQWKGAASEIFLRHAVALAAERGYTITHMDCTLVCERPKIGPYHAVMKAKMSELMGLQPDQVS 371
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PSEPW (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas putida (strain W619) GN=ispF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.343e-31 Identity = 62/127 (48.82%), Postives = 92/127 (72.44%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA GL DIG+ FPD+DP++KGA S V ++ V ++ G+++GN+DAT++ Q PK+SP+ ET+R ++E L + VN Sbjct: 2 RIGHGYDVHRFCDGDFITLGGVRIPHKYGLLAHSDGDVLLHALSDALLGAAGLGDIGKHFPDTDPQFKGADSRVLLRHVVGIVQAKGWKVGNVDATIVAQAPKMSPHIETMRQRIAEDLQVELDQVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_THETN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermoanaerobacter tengcongensis GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 64/127 (50.39%), Postives = 89/127 (70.08%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 RVG G+D+HR E G L++GGI +P E+G + HSDGDVL+H ++D ILGA GL DIG+ FPD+D +K S + +K + L+ E Y + N+D ++ +RPKLSPYK+ IRT+L+ELLG VN Sbjct: 5 RVGIGYDVHRFEEGKKLMLGGIEIPFEKGLKGHSDGDVLIHALIDGILGAAGLGDIGEHFPDTDVAYKEVDSKILLKRVLELVSE-HYVVNNVDCIVVTERPKLSPYKDRIRTSLAELLGVSKERVN 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SOLUE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Solibacter usitatus (strain Ellin6076) GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 65/122 (53.28%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 680 R G G+D+HR+ G +I+GG+ VP E G E HSD DVL H + DAILGA L DIG FPDSDP+WKG S VF++ A L + GY I N+D+T+IL+RPKL +++TIR L+E L D Sbjct: 5 RTGLGWDVHRIATGRKMILGGVTVPCEFGLEGHSDADVLAHAITDAILGAAALGDIGMHFPDSDPRWKGCDSLVFLRHARDLATQKGYRIVNVDSTIILERPKLKDFRQTIRERLAETLELD 126
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PROMH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Proteus mirabilis (strain HI4320) GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 61/117 (52.14%), Postives = 85/117 (72.65%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSE 665 R+GHG+D+H+ P+IIGG+ +P+E+G AHSDGDV+LH V DAILGA+ + DIG +FPD+DP +KGA S V ++EA + GY IGNLD T+I Q PK+ P+ +R N++E Sbjct: 2 RIGHGYDVHKFGGEGPIIIGGVRIPYEQGLLAHSDGDVVLHAVTDAILGAVAMGDIGTLFPDTDPAYKGADSRVLLREAFSRVMAKGYRIGNLDVTIIAQAPKMLPHTPQMRVNIAE 118 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |