EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_HELP2 (Bifunctional enzyme ispD/ispF OS=Helicobacter pylori (strain P12) GN=ispDF PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25 Identity = 55/126 (43.65%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 318 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 +G GFD H P+++GG+ + E G +AHSDGD LLH V+DAILGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I NLS+LLG + + ++ Sbjct: 249 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAILGAIKGGDIGEWFPDNDPKYKNASSKELLKIVLDFSQSIGFELFEMGATIFSEIPKITPYKPAILENLSQLLGLEKSQIS 374
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_BART1 (Bifunctional enzyme ispD/ispF OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ispDF PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25 Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADP 683 RVG+G+D+H E G LI+ GI +P + HSD DV LH + DA+L G DIG FP SDP+WK S +F++ A+ L+ +AG I N+D T+I + PK+ PY+ + NL +L P Sbjct: 238 RVGNGYDVHSFEEGDFLILCGIRIPFHKKLNGHSDADVALHALTDALLATRGAGDIGTHFPPSDPQWKNVSSEIFLRHALSLLKQAGGRIANVDITVIAENPKIGPYRHAMIENLMTILAITP 360
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_AZOC5 (Bifunctional enzyme ispD/ispF OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=ispDF PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.204e-25 Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSEL 668 R G GFD+H PG +++GG+ +P +RG + HSD DV LH + DA+LGAL DIG FP SDP+WKGA S F+ A+ + E G + +LD TLI + PK+ P+++ IR ++ + Sbjct: 231 RTGTGFDVHAFGPGDHVMLGGVAIPFDRGLDGHSDADVGLHALTDAVLGALADGDIGAHFPPSDPQWKGATSDRFLAFAIERVRERGGIVAHLDLTLICEAPKVGPHRDAIRAEIARI 348
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PELLD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelodictyon luteolum (strain DSM 273) GN=ispF PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.184e-25 Identity = 54/127 (42.52%), Postives = 81/127 (63.78%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G G D+H G LI+GG+++P +G E HSD DVLLH V DA+LGA L DIG FP++ ++K S + +K RL+ + GY N+DA L+L+ PK++PY +R N++ L D ++V+ Sbjct: 2 RIGIGIDVHPFAEGRKLIVGGVDIPSPKGLEGHSDADVLLHAVSDALLGAAALGDIGLHFPNTSAEYKDIDSMILLKHVGRLLTKNGYRTVNVDAMLLLEAPKIAPYVADMRRNIARCLDIDTSLVS 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_HELPJ (Bifunctional enzyme ispD/ispF OS=Helicobacter pylori J99 GN=ispDF PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.184e-25 Identity = 55/126 (43.65%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 318 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 +G GFD H P+++GG+ + E G +AHSDGD LLH V+DAILGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I NLS+LLG + + ++ Sbjct: 252 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAILGAIKGGDIGEWFPDNDPKYKNASSKELLKIVLDFSQSIGFELLEMGATIFSEIPKITPYKPAILENLSQLLGLEKSQIS 377
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_HELPH (Bifunctional enzyme ispD/ispF OS=Helicobacter pylori (strain HPAG1) GN=ispDF PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.184e-25 Identity = 54/126 (42.86%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 318 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 +G GFD H P+++GG+ + E G +AHSDGD LLH V+DA+LGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I NLS+LLG + + ++ Sbjct: 249 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAVIDAVLGAIKGGDIGEWFPDNDPKYKNASSKELLKIVLDFSQSIGFELFEMGATIFSEIPKITPYKPAILENLSQLLGLEKSQIS 374
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_GLOVI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Gloeobacter violaceus GN=ispF PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 4.513e-25 Identity = 50/120 (41.67%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 674 R+G+G+D HRL G LI+GG+ +P+ G HSD D+L H + DA+LGA L DIG+ FP DP+W+ S + + + + L+ G + N+DA ++ +RPKL+P+ IR +L+ LG Sbjct: 9 RIGNGYDFHRLVEGRRLILGGVEIPYRLGLLGHSDADLLTHAITDALLGAACLGDIGRHFPPGDPQWQDVSSLLLLSKVLELVRGRGLRLSNVDAVVVAERPKLAPHIPAIRQSLAGALG 128 HSP 2 Score: 23.8682 bits (50), Expect = 4.513e-25 Identity = 10/29 (34.48%), Postives = 18/29 (62.07%), Query Frame = 2 Query: 686 RCKSESETHEKVDSLGENRSIAAHTVILL 772 R ++ T+E + +GE ++A H V+LL Sbjct: 133 RLSVKATTNEGLGPVGEGLAMACHAVVLL 161
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMC5 (Bifunctional enzyme ispD/ispF OS=Campylobacter curvus (strain 525.92) GN=ispDF PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.464e-25 Identity = 54/125 (43.20%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 321 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 G GFD H E G L + G + +E G +AHSDGDV LH + DAILGA GL DIG++FPD+D ++KG S + ++EA + + G+E+ N D T++ +RPK+S +K + N++ L P +N Sbjct: 214 GIGFDAHEFERGRELWLCGEKIEYEFGLKAHSDGDVALHALTDAILGAAGLGDIGELFPDTDAEFKGISSLLLLQEAYKKVQSVGFELVNADITIMAERPKISKFKRKMEANIAGALNLAPNRIN 338
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_TREPA (Bifunctional enzyme ispD/ispF OS=Treponema pallidum GN=ispDF PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.137e-25 Identity = 55/126 (43.65%), Postives = 80/126 (63.49%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVV 692 RVG G D+H L G PLI+ GI++P ++G + HSD DVL H +DA+LGA GL DIG FP D +WK A S ++ +L+ A + + NLDA + L++P L P++E +R +L++ L T V Sbjct: 244 RVGLGTDMHALCAGRPLILAGIHIPSKKGAQGHSDADVLAHASIDALLGAAGLGDIGTFFPSCDGRWKDAHSCALLRHTWQLVRAACWRLVNLDAVVCLEQPALHPFREAMRASLAQALDTHVTRV 369
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_HELAH (Bifunctional enzyme ispD/ispF OS=Helicobacter acinonychis (strain Sheeba) GN=ispDF PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.137e-25 Identity = 54/126 (42.86%), Postives = 81/126 (64.29%), Query Frame = 3 Query: 318 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 +G GFD H P+++GG+ + E G +AHSDGD LLH ++DAILGA+ DIG+ FPD+DPK+K A S +K + G+E+ + AT+ + PK++PYK I NLS+LLG + + ++ Sbjct: 249 IGMGFDTHAFIKDKPMVLGGVVLDCEFGLKAHSDGDALLHAMIDAILGAIKGGDIGEWFPDNDPKYKNASSKELLKIVLDFSQSIGFELFEMGATIFSEIPKITPYKPAILENLSQLLGLEKSQIS 374 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |