EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMHC (Bifunctional enzyme ispD/ispF OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ispDF PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.590e-24 Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 321 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 671 G+GFD+H G + +GG+ +P E HSD D +H ++DAILGA GL DIG++FPD+D +KG S + +++ V + G++I N D T+I Q+PK+SPYKE + LSE+L Sbjct: 215 GNGFDVHAFAKGEFITLGGVKIPCEYSLVGHSDADAAIHALMDAILGACGLGDIGELFPDTDDSFKGIDSKILLQKVVNFVHLLGFKIINADITIIAQKPKISPYKEKMCEILSEIL 331
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJR (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni (strain RM1221) GN=ispDF PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.076e-24 Identity = 52/125 (41.60%), Postives = 81/125 (64.80%), Query Frame = 3 Query: 321 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA GL DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ Q PKL +K+ +++N++ L D +N Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRIN 337
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJE (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni GN=ispDF PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.076e-24 Identity = 52/125 (41.60%), Postives = 81/125 (64.80%), Query Frame = 3 Query: 321 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA GL DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ Q PKL +K+ +++N++ L D +N Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRIN 337
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_AGRT5 (Bifunctional enzyme ispD/ispF OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ispDF PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.076e-24 Identity = 50/120 (41.67%), Postives = 80/120 (66.67%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 674 R G+G+D+H+LE G + + GI + H++ + HSD DV LH + DA+L G DIG FP SDP+WKGA S +F++ A +++ + G I N D +LI + P++ P+++ +R LS++LG Sbjct: 241 RTGNGYDVHQLEAGDGVTLCGIFIEHDQRLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDPQWKGAASRIFLEHAAKVVRDNGGTIMNADVSLIAEAPRIGPHRQAMREALSDMLG 360
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PELTS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ispF PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.542e-24 Identity = 51/127 (40.16%), Postives = 81/127 (63.78%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 RVG G+D+H+L G PL++GG+++P +G HSD DVL H V+DA+LGA G DIG+ FPD+D ++KG S + ++ G + N+D+ ++ Q PKLSP+ E ++ ++ L P+ V+ Sbjct: 2 RVGFGYDVHKLVEGRPLVLGGVSIPFVKGLLGHSDADVLAHAVMDALLGAAGAGDIGRHFPDNDGRYKGISSMKLLARVGDILSRQGLAVVNIDSVVVAQGPKLSPFIEEMQKRMAGALQIQPSQVS 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CHLPD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=ispF PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24 Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R G G D+H G L+IGG+ +P +G + HSD DVLLH V DA+LGA L DIG FP++ ++K S + +K +L+D+ G+ I N+DA L+L+ PK++ Y +R N++ LG + V+ Sbjct: 2 RTGIGIDVHPFAEGRKLVIGGVEIPSAKGLDGHSDADVLLHAVSDALLGAAALGDIGLHFPNTSQEFKDIDSMILLKHVKKLLDKEGFRIVNIDAMLLLEAPKIASYINEMRKNIARCLGLELNAVS 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_BARHE (Bifunctional enzyme ispD/ispF OS=Bartonella henselae GN=ispDF PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24 Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 671 R G+G+D+H E G LI+ GI +P + HSD DV LH + DA+L G DIG FP SDP+W+ S +F++ A+ ++ +AG I N+D TLI + PK+ PY+ + NL +L Sbjct: 237 RTGNGYDVHSFEEGNSLILCGIKIPFHKKLNGHSDADVALHALTDALLATRGAGDIGTHFPPSDPQWQNVSSEIFLRHALDIVKQAGGRIANVDITLIAEEPKIGPYRHAMVGNLMNML 355
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_EHRRW (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ehrlichia ruminantium (strain Welgevonden) GN=ispF PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.821e-24 Identity = 55/134 (41.04%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 312 FRVGHGFDLHRLE------PGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 FR+G G+D+HR + + I GI + + + AHSDGDV LH + DAILGA+G IGQ FP++D KWK A SS F+ EA + E GY I N D +I ++PK+ PY ++ +++ DP+ +N Sbjct: 10 FRIGIGYDVHRFDNINNDDSNTSITICGIKINYHKKIIAHSDGDVGLHALADAILGAVGCGSIGQHFPNTDKKWKNAESSHFVIEAQKKAQERGYIISNADIIIICEQPKIMPYALEMQHYIAQFTSIDPSFIN 143 HSP 2 Score: 24.2534 bits (51), Expect = 4.821e-24 Identity = 9/24 (37.50%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 698 ESETHEKVDSLGENRSIAAHTVIL 769 ++ T EK+ ++G N IAA ++L Sbjct: 145 KATTTEKLGAIGRNEGIAAQAIVL 168
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_EHRRG (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ehrlichia ruminantium (strain Gardel) GN=ispF PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.821e-24 Identity = 55/134 (41.04%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 312 FRVGHGFDLHRLE------PGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 FR+G G+D+HR + + I GI + + + AHSDGDV LH + DAILGA+G IGQ FP++D KWK A SS F+ EA + E GY I N D +I ++PK+ PY ++ +++ DP+ +N Sbjct: 10 FRIGIGYDVHRFDNINNDDSNTSITICGIEINYHKKIIAHSDGDVGLHALADAILGAVGCGSIGQHFPNTDQKWKNAKSSHFVIEAQKKAQERGYIISNADIIIICEQPKIMPYALEMQHYIAQFTSIDPSFIN 143 HSP 2 Score: 24.2534 bits (51), Expect = 4.821e-24 Identity = 9/24 (37.50%), Postives = 16/24 (66.67%), Query Frame = 2 Query: 698 ESETHEKVDSLGENRSIAAHTVIL 769 ++ T EK+ ++G N IAA ++L Sbjct: 145 KATTTEKLGAIGRNEGIAAQAIVL 168
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PELPB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ispF PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24 Identity = 51/127 (40.16%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G G D+H G L+IGG+++P G + HSD DVLLH V DA+LGA L DIG FP++ ++K S + +K+ +L+++ GY+ N+DA L+L+ PK++PY +R N++ L + +V+ Sbjct: 2 RIGIGIDVHPFAEGRKLVIGGVHIPGHNGLDGHSDADVLLHAVSDALLGAAALGDIGLHFPNTSQEFKDIDSMILLKQVRKLLEKHGYQTVNIDAMLLLEEPKIAPYITGMRKNIARCLDIEIGMVS 128 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |