EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_CAMJD (Bifunctional enzyme ispD/ispF OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=ispDF PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23 Identity = 51/125 (40.80%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 321 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 G+GFD+H PL++ G+ + G +AHSDGDVL H + DAILGA L DIG+++PD+D K+K A S +K+A + E G+E+ N+D ++ Q PKL +K+ +++N++ L D +N Sbjct: 213 GNGFDVHEFGENRPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAVLGDIGELYPDTDMKFKNANSMELLKQAYDKVREVGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRIN 337
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CHLCH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Chlorobium chlorochromatii (strain CaD3) GN=ispF PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23 Identity = 51/120 (42.50%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 674 R+G G D+H G L+IGG+ +P G + HSD DVLLH + DA+LGA L DIG FP++ ++K S + +K +L+ E GY N+DA L+L+ PK++PY + +R N+++ LG Sbjct: 2 RIGIGIDVHPFAAGRKLVIGGVYIPGHDGLDGHSDADVLLHAISDALLGAAALGDIGLHFPNTSAEFKDIDSMILLKHVGKLLAEHGYAPVNVDAMLLLEAPKIAPYIQQMRQNIADALG 121
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_SULDN (Bifunctional enzyme ispD/ispF OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=ispDF PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23 Identity = 52/125 (41.60%), Postives = 77/125 (61.60%), Query Frame = 3 Query: 321 GHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 G GFD+H + + +GGI + E G AHSDGDV +H ++DA+LGA G+ DIG +FPD+D K+KGA S + V + G+ I N+D T+ ++P++ YK +R +S +LG D VN Sbjct: 228 GVGFDVHAFDDKGEMFLGGIKIDSEYGFLAHSDGDVAIHALIDALLGAAGMGDIGMMFPDNDVKYKGADSKELLGTLVTKLRHFGFVIVNVDITIAAEKPRIGNYKMAMRKKISSILGIDAQRVN 352
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SYNAS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Syntrophus aciditrophicus (strain SB) GN=ispF PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.998e-23 Identity = 50/119 (42.02%), Postives = 76/119 (63.87%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 671 RVG G+D HR LI+GG+ +PHE G HSD D L H + DA+LGA+ DIG FPDSDP + G S + + + ++D+ G+ I +D+T+I++RPKL PY +++ ++ +L Sbjct: 2 RVGCGYDSHRWAAKRKLILGGVEIPHEFGLTGHSDADALTHAICDALLGAISEGDIGFQFPDSDPAYSGISSLKLLSKILEMVDKKGFAIDYIDSTVIMERPKLMPYIPDMKSKIAGVL 120
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_HELHP (Bifunctional enzyme ispD/ispF OS=Helicobacter hepaticus GN=ispDF PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.916e-23 Identity = 50/126 (39.68%), Postives = 77/126 (61.11%), Query Frame = 3 Query: 318 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 +G+G D+H+ E + +GG+ + G +AHSDGDV+LH + DAILGA+G DIG+ FPD+D +K A S + + E GYE+ N D ++I Q PK++PYK +R ++ +L +N Sbjct: 225 IGNGIDVHQFEKNKQMWLGGVEIESPFGFKAHSDGDVVLHALSDAILGAIGGGDIGEWFPDTDETYKNADSKMMLSEIYTFAQSVGYELYNADISIIAQTPKIAPYKSAMRECIARILRVPNAHIN 350
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ANAMM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Anaplasma marginale (strain St. Maries) GN=ispF PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 6.701e-23 Identity = 50/134 (37.31%), Postives = 81/134 (60.45%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYP----LIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 +PFRVG G+D+H P +++ G+ + R +AHSDGDV H +VDA+LG +G IG+ FP++DP+W+ S+ F+ EA GY + N D T++ + PK+ P+ ++ +S+LLG D + +N Sbjct: 8 VPFRVGIGYDVHGFADSPPENGHIVLCGVEIAFHRKIKAHSDGDVGTHALVDALLGCVGEGSIGEHFPNTDPRWENMSSTHFLLEAQSKALAKGYAVLNFDLTIVCELPKIIPHVPKMKLFMSKLLGMDASAIN 141 HSP 2 Score: 25.0238 bits (53), Expect = 6.701e-23 Identity = 11/24 (45.83%), Postives = 14/24 (58.33%), Query Frame = 2 Query: 707 THEKVDSLGENRSIAAHTVILLMK 778 T EK+ +G IAAH V+L K Sbjct: 146 TTEKLGFIGRGEGIAAHAVVLCRK 169
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_AZOPC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=ispF PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23 Identity = 46/125 (36.80%), Postives = 81/125 (64.80%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 680 + R+G G+D+H L Y L +GGI +P+E+G + HSD DVL+H + DA+LGA + +IG FP+++ K + S + +K+ + + YE+ N D T+ +++PKL+P+ ++T L+E++ D Sbjct: 1 MKIRIGFGYDVHPLVMNYNLWLGGIKIPYEKGLKGHSDADVLIHALCDALLGAADIGNIGTNFPNTNKKLRNIDSKILLKQTMSFIYSKNYELNNADITVCIEQPKLNPFIPQMKTCLAEIMQTD 125
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_GRABC (Bifunctional enzyme ispD/ispF OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ispDF PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23 Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 674 R+G G+D+H E G LI+ GI VPH +G HSD DV +H + DAI GAL DIG+ FP ++ WK A S+ F++ A + G + N D TLI ++PK++P+ + L+ELLG Sbjct: 220 RIGTGYDVHAFETGRKLILCGIEVPHHQGLAGHSDADVGIHALCDAIYGALAEGDIGRHFPPTEASWKDADSARFLRHAAERIAARGGFLANADLTLICEKPKITPHAPAMIARLAELLG 339
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BLOPB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Blochmannia pennsylvanicus (strain BPEN) GN=ispF PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22 Identity = 51/127 (40.16%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G+GFD+H+ PL IGG+++P +G +AHSDGDV++H ++DA+LGA DIG +FPD+D K+ S ++ A + G+ + N+D T+ILQ PK++ Y ++ +LS+ L T +N Sbjct: 3 RIGYGFDVHQFGGCRPLTIGGVSIPCMKGIKAHSDGDVMMHSLIDALLGAACCGDIGSMFPDTDAKYNNIDSRKLLRIAWEKITMQGFLLENIDITVILQIPKINTYIYQMKHHLSQDLNCSVTSIN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BACV8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=ispF PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 680 + RVG GFD+H+L G L +GGI HE G HSD DVL+H + DA+LGA + DIG FPD+ ++K S + + E V L+ GY++GN+DAT+ +RPKL ++ L+ L+ D Sbjct: 1 MKIRVGFGFDVHQLVTGRELWLGGIKFEHELGLLGHSDADVLIHAICDALLGAANMRDIGYHFPDTAGEFKNIDSKILLAETVDLIAAKGYKVGNVDATICAERPKLKARIPEMQLVLAHLMRID 125 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |