EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_LEIXX (Bifunctional enzyme ispD/ispF OS=Leifsonia xyli subsp. xyli GN=ispDF PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22 Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 R+G G D H +P L + G+ E G HSDGDV+ H +VDA+L A L DIG +F DP++ GA VF+ E RL++E G+ IGN+ A ++ RPK +P + T LS +LGA +V Sbjct: 234 RIGFGTDTHAFDPSAELWLAGLRWEGEPGLAGHSDGDVVAHAIVDALLSAARLGDIGGVFGTGDPRFSGAHGEVFLTETRRLVEEEGFRIGNVSAQIVGNRPKFAPRRAEAETLLSRVLGAPVSV 358
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_DESDG (Bifunctional enzyme ispD/ispF OS=Desulfovibrio desulfuricans (strain G20) GN=ispDF PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.488e-22 Identity = 52/127 (40.94%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 318 VGHGFDLHRL-EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 VG G+D+HR G P+ +GG+ + G AHSDGDVLLH + DA+LG +GL DIG +FPD+D + A S+V + E + AG I ++D T+I Q P+++P+++ I N+ + D + VN Sbjct: 241 VGWGYDVHRFGSDGRPMKLGGVPIAGGPGVIAHSDGDVLLHALTDAVLGCMGLGDIGMLFPDTDAAYDNADSAVMLNEVLEKARNAGLLITHVDLTIITQIPRITPWRDQIHKNICRITRLDASSVN 367
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_DESPS (Bifunctional enzyme ispD/ispF OS=Desulfotalea psychrophila GN=ispDF PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.538e-22 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPY 635 R+GHGFD H+L LI+GG+ +P+ G HSD DVL+H + DA+LGA+G DIG+ FPDS +K S ++ ++ + E Y+IGN D ++I Q PKL+PY Sbjct: 232 RIGHGFDAHQLVEKRRLILGGVEIPYHLGLAGHSDADVLVHALCDALLGAIGAGDIGRHFPDSSDAFKDIYSIRLLESVMQKVGELNYKIGNADISVICQAPKLAPY 338
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_MAGSA (Bifunctional enzyme ispD/ispF OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=ispDF PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.330e-22 Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLI-IGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 674 R G+D+HR +P + G+ VPHE G HSD DV LH + DA+LGA+ DIG FP +D +WKGA S F+ A L+ G I N+D T+I +RPK+ P++ + ++E+LG Sbjct: 227 RSASGYDVHRFDPAKDACWLCGVPVPHEAGLLGHSDADVGLHALTDAVLGAISAGDIGHHFPPTDARWKGAASDQFLAHAGSLVTAKGGRIVNVDVTIICERPKVGPHRAAMAARVAEILG 347
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCMM (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ispF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22 Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +EPG P + G+ P GC HSDGDV H + DA+L A GL DIG +F DP+W+G + ++ V L+ + GY +GN ++ RPK+ + + LS LL A +V Sbjct: 6 RVGLGVDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAAHALCDAVLSAAGLGDIGDVFGVGDPRWEGVSGATMLRHVVELITQHGYRVGNASVQVVGNRPKIGWRRYEAQAVLSRLLNAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_LEPBP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=ispF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22 Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 3 Query: 312 FRVGHGFDLHRL--EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSEL 668 FRVG+G D H+L EP PL++ G+ + E HSD DV+LH V DAILGAL L DIG FPD+DP++K S+ I++ + L+ E +++ N+D T + PK+SP + + +L+ + Sbjct: 2 FRVGNGIDFHKLIHEPFRPLVLAGVEIKSEFAFLGHSDADVILHAVADAILGALSLGDIGVHFPDTDPQYKNMKSTRIIEKCLELVAEKKFKLINVDCTYVGDHPKISPIRAELNASLANI 122
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_LEPBA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=ispF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22 Identity = 51/121 (42.15%), Postives = 77/121 (63.64%), Query Frame = 3 Query: 312 FRVGHGFDLHRL--EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSEL 668 FRVG+G D H+L EP PL++ G+ + E HSD DV+LH V DAILGAL L DIG FPD+DP++K S+ I++ + L+ E +++ N+D T + PK+SP + + +L+ + Sbjct: 2 FRVGNGIDFHKLIHEPFRPLVLAGVEIKSEFAFLGHSDADVILHAVADAILGALSLGDIGVHFPDTDPQYKNMKSTRIIEKCLELVAEKKFKLINVDCTYVGDHPKISPIRAELNASLANI 122
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CELJU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=ispF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPY 635 + R+G G+D+H G ++IGG+ +PH G AHSDGDVLLH + DA+LGA+ L DIG+ FPD+D +++ A S ++ + + G+++ N D T++ Q P+++ Y Sbjct: 1 MSMRIGQGYDVHAFGEGEKIVIGGVVIPHHHGLVAHSDGDVLLHALCDALLGAVALGDIGKHFPDTDMQYRNADSRSLLRMVYAKVSQHGWKLANADMTIVAQAPRMASY 110
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BUCAT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=ispF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22 Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I + PK+ PY +R+NLS Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLS 117
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BUCAP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ispF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22 Identity = 47/116 (40.52%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 R+G+GFD+H PLIIGG+ +P+ +G AHS+GD+L+H ++DA+LGA + DIG FP D K+K S + +K + + Y I N+D T+I + PK+ Y +R+N++ Sbjct: 2 RIGYGFDIHAFGSIKPLIIGGVQIPYNKGLIAHSNGDLLIHSLIDALLGATAMGDIGTFFPSEDKKYKNINSRILLKYIWKRIYLKNYRISNIDITIITETPKILSYIFLMRSNIA 117 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |