EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BUCAI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ispF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22 Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I + PK+ PY +R+NLS Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLS 117
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BUCA5 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=ispF PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.655e-22 Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 R+G+GFDLH PLIIGG+ +P E+G AHS+GD+L+H ++DA+LGA + DIG FP ++ +K S + +K+ + Y+I N+D T+I + PK+ PY +R+NLS Sbjct: 2 RIGYGFDLHAFGSTKPLIIGGVLIPCEKGLIAHSNGDLLIHSLIDALLGATAMGDIGSFFPSNNYIYKNIDSRILLKKIWNKIILLNYDICNIDITIIAEYPKMLPYIFFMRSNLS 117
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_SPHWW (Bifunctional enzyme ispD/ispF OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=ispDF PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22 Identity = 49/120 (40.83%), Postives = 72/120 (60.00%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLG 674 R GFD+H G + +GG+ + H+R HSD DV LH + DA+LG + DIG FP SD +WKGA S++F+ A L+ AG + +D T+I + PK+ P++ IR ++ LLG Sbjct: 225 RTAMGFDVHGFTAGDGVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDQRWKGADSAMFLAHARDLVAAAGGIVDFVDLTIICEAPKVGPHRAAIRDRIAALLG 344
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_DESMR (Bifunctional enzyme ispD/ispF OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=ispDF PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.645e-22 Identity = 55/133 (41.35%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 321 GHGFDLHRL--------EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 G+G+D+HR +P P+ +GG + AHSDGDVLLH + DA+LG + DIG++FPDS+P + S VF+ EA+ G I ++D T+I Q PK+SP+ E IR N++ LLG + VN Sbjct: 238 GYGYDVHRYADPRNPGKQPPRPMKLGGFPILGAPEVLAHSDGDVLLHALTDAVLGCVAGGDIGRLFPDSNPDFDNMASGVFLSEALLAAKAKGLTITHVDLTIIAQIPKISPHAEAIRLNVAALLGLNKEQVN 370
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCTU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium tuberculosis GN=ispF PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +EPG P + G+ P GC HSDGDV +H + DA+L A GL DIG++F DP+W+G + ++ V L+ + GY +GN +I RPK+ + + LS LL A +V Sbjct: 6 RVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCTA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ispF PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +EPG P + G+ P GC HSDGDV +H + DA+L A GL DIG++F DP+W+G + ++ V L+ + GY +GN +I RPK+ + + LS LL A +V Sbjct: 6 RVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCBT (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ispF PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +EPG P + G+ P GC HSDGDV +H + DA+L A GL DIG++F DP+W+G + ++ V L+ + GY +GN +I RPK+ + + LS LL A +V Sbjct: 6 RVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCBP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ispF PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +EPG P + G+ P GC HSDGDV +H + DA+L A GL DIG++F DP+W+G + ++ V L+ + GY +GN +I RPK+ + + LS LL A +V Sbjct: 6 RVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCBO (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium bovis GN=ispF PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.806e-21 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +EPG P + G+ P GC HSDGDV +H + DA+L A GL DIG++F DP+W+G + ++ V L+ + GY +GN +I RPK+ + + LS LL A +V Sbjct: 6 RVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_RHOSR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Rhodococcus sp. (strain RHA1) GN=ispF PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.665e-21 Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +E G P + G+ E GC HSDGDV +H + DA+L A GL D+G +F P+W G + + E RL++E +++ N +I RPK+ P + + LS++LGA +V Sbjct: 2 RVGIGTDVHPIEQGRPCWMAGLLFEDENGCAGHSDGDVAVHALCDALLSAAGLGDLGSVFGTGRPEWSGVSGAAMLAEVRRLLEEDDFDVANAAVQVIGNRPKIGPRRNEAQKVLSDILGAPVSV 126 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |