EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_EHRCR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ehrlichia chaffeensis (strain Arkansas) GN=ispF PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.665e-21 Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 312 FRVGHGFDLHRLE------PGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 F+VG G+D+H+ + + I GI + + + AHSDGDV LH + DAILGA+G IGQ FP++D WK S F+ EA + E GY I N D T+I ++PK+ P+ ++ ++ L+ DP+ +N Sbjct: 10 FKVGIGYDVHKFDNTCYNDANTFITICGIKINYHKKIIAHSDGDVGLHALTDAILGAVGCGSIGQHFPNTDNTWKNIKSDYFLIEAQKKAQEKGYSISNADITIICEQPKIMPHALEMQEYIANLICIDPSCIN 143
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_EHRCJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ehrlichia canis (strain Jake) GN=ispF PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.665e-21 Identity = 53/134 (39.55%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 312 FRVGHGFDLHRLE------PGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 F+VG G+D+H+ + + I GI + H + AHSDGDV LH + DAILGA+G IGQ FP++D KWK A S F+ EA E GY I N D +I ++PK+ P+ ++ ++ L+ D + +N Sbjct: 10 FKVGIGYDVHKFDNIEYDATNTFITICGIKINHHKKIVAHSDGDVGLHALTDAILGAVGCGSIGQHFPNTDNKWKDAKSDYFLIEAKNKAQEKGYYISNADIIIICEQPKIMPHALKMQEYIANLIKIDTSCIN 143
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_THEFY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermobifida fusca (strain YX) GN=ispF PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20 Identity = 50/120 (41.67%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 318 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 677 VG G D+H + G PL + G+ P E G HSDGDV H DA+ A L D+G F SDP+W+GA + EA + + AGYEIGN+ +I RPK +P + LS +GA Sbjct: 2 VGVGTDVHPFQTGRPLFLAGLEWPDEVGLSGHSDGDVAAHAACDALFSACALGDLGSQFGTSDPRWRGASGVALLTEAAQRVRAAGYEIGNIAIQIIGNRPKFAPRRHEAEKVLSAAVGA 121
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_NOCFA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Nocardia farcinica GN=ispF PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20 Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +EPG P + G+ E GC HSDGDV H + DA+L A GL D+G +F P+W + + E RL+ EAG+E+ N +I RPK+ P + + L +LL A +V Sbjct: 2 RVGIGSDVHPIEPGRPCWMAGLLFEGEDGCSGHSDGDVAAHALCDALLSAAGLGDVGAVFGTGRPEWADVSGAAMLTEVRRLLGEAGFEVVNAAVQVIGNRPKIGPRRAEAQRVLGDLLDAPVSV 126
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCLE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium leprae GN=ispF PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20 Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG GFD+H EPG P + G+ P GC HSDGDV +H + DA+L A G DIG +F DP+W+ + ++ V L+ GYE+ N +I RPK+ P + + LS LL A +V Sbjct: 6 RVGLGFDVHVFEPGRPCWLVGLLFPDNDGCAGHSDGDVAVHALCDAVLSAAGQGDIGGLFAVGDPRWERVSGADMLRHVVELLLRHGYEVVNASVQVIGNRPKIGPRRTEAQRLLSALLRAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCLB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium leprae (strain Br4923) GN=ispF PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20 Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG GFD+H EPG P + G+ P GC HSDGDV +H + DA+L A G DIG +F DP+W+ + ++ V L+ GYE+ N +I RPK+ P + + LS LL A +V Sbjct: 6 RVGLGFDVHVFEPGRPCWLVGLLFPDNDGCAGHSDGDVAVHALCDAVLSAAGQGDIGGLFAVGDPRWERVSGADMLRHVVELLLRHGYEVVNASVQVIGNRPKIGPRRTEAQRLLSALLRAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_THEMA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermotoga maritima GN=ispF PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20 Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 309 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 671 P +G G+D H L G L++ G+ + G HSDGDVL H ++DA+LGA L DIG FP++ ++K A S +KE V++++E G+ + N+DAT++ KLSPY+E I NL L Sbjct: 5 PMFIGFGYDRHPLVEGRRLVLAGVEIDAPLGSLGHSDGDVLSHAIIDALLGAGCLGDIGTWFPET-KEYKDANSLDLLKETVKILEERGFSVVNVDATVVASIVKLSPYREKIVENLKSAL 124
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_NOCSJ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=ispF PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20 Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHE-RGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+HRL G PL + G++ P E +G E HSD DV H DA+ A GL D+G F +DP W GA + ++E R + AG+EIGN+ +I RP+L + T LS +GA +V Sbjct: 6 RVGIGTDVHRLVDGVPLHLAGLHWPDEPQGLEGHSDADVAAHAACDALFSAAGLGDLGSNFGTADPAWAGASGAALLEETARRVRAAGFEIGNVAVQVIGNRPRLGGRRAEAETALSAAVGAPVSV 131
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_RHOOB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Rhodococcus opacus (strain B4) GN=ispF PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.376e-20 Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +E G P + G+ E GC HSDGDV +H + DA+L A GL D+G +F P+W G + + E RL+++ + + N +I RPK+ P + + LS++LGA +V Sbjct: 2 RVGIGTDVHPIEQGRPCWMAGLLFEDENGCAGHSDGDVAVHALCDALLSAAGLGDLGSVFGTGRPEWSGVSGAAMLAEVRRLLEQDDFGVANAAVQVIGNRPKIGPRRNEAQKVLSDILGAPVSV 126
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_THENN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=ispF PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.052e-20 Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 318 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 671 +G G+D H L G L++ G+ + G HSDGDVL H ++DA+LGA L DIG FP++ ++K A S +KE V++++E G+ + N+DAT++ KLSPY+E I NL L Sbjct: 8 IGFGYDRHPLVEGRRLVLAGVEIDAPLGSLGHSDGDVLSHAIIDALLGAGCLGDIGTWFPET-KEYKDANSLDLLKETVKILEERGFSVVNVDATVVASIVKLSPYREKILENLKSAL 124 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |