EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_RHOE4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ispF PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.912e-20 Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +E G P + G+ GC HSDGDV +H + DA+L A GL D+G +F P+W G + + E RL++E + +GN +I RPK+ P + + LS++LGA +V Sbjct: 2 RVGLGTDVHPIEVGRPCWMAGLLFEEADGCSGHSDGDVAVHALCDALLSAAGLGDLGSVFGTGRPEWDGVSGARMLAEVRRLLEENQFTVGNAAVQVIGNRPKIGPRRGEAQKVLSDILGAPVSV 126
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCPA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium paratuberculosis GN=ispF PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.912e-20 Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 R+G G D+H ++PG P + G+ GC HSDGDV H + DA+L A GL D+G +F DP+W G + ++ L G+ +GN +I RPK+ P + + LSELLGA +V Sbjct: 6 RIGLGVDVHPIQPGRPCRLLGLLFDDADGCAGHSDGDVGAHALCDAVLSAAGLGDVGAVFGVDDPRWAGVSGADMLRHVADLTARHGFRVGNAAVQVIGNRPKVGPRRAEAQRVLSELLGAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCA9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ispF PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.912e-20 Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG G D+H +E G P + G+ E GCE HSDGDV H + DA+L A GL D+G +F P+W G + + L+ + G++IGN +I RPK+ P + + LS L+GA +V Sbjct: 6 RVGIGTDVHPIEEGKPCWLLGLLFSDENGCEGHSDGDVAAHALCDALLSAAGLGDVGAVFGTGRPEWTGVSGAKMLSHVRDLLHDNGFQIGNAAVQVIGNRPKVGPRRAEAQELLSGLIGAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_MYCA1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Mycobacterium avium (strain 104) GN=ispF PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.912e-20 Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 R+G G D+H ++PG P + G+ GC HSDGDV H + DA+L A GL D+G +F DP+W G + ++ L G+ +GN +I RPK+ P + + LSELLGA +V Sbjct: 6 RIGLGVDVHPIQPGRPCRLLGLLFDDADGCAGHSDGDVGAHALCDAVLSAAGLGDVGAVFGVDDPRWAGVSGADMLRHVADLTARHGFRVGNAAVQVIGNRPKVGPRRAEAQRVLSELLGAPVSV 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ACIC1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=ispF PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.912e-20 Identity = 48/121 (39.67%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 677 RVG G D+H P PL + G++ P E G HSD DV++H + +A+L A GL D+G F ++P+W+ A + + E VRL+ +AGY +GN L+ +RPKL + L+E +GA Sbjct: 8 RVGIGVDVHPFSPDRPLWLAGLHWPGEPGLAGHSDADVVIHALCNALLSAAGLGDLGTQFGTAEPEWRDAAGTRLLTETVRLVRDAGYAVGNAAVQLLGERPKLRERRTEAEQLLTETVGA 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PLAFX (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Plasmodium falciparum (isolate HB3) GN=ISPF PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.079e-20 Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 315 RVGHGFDLHR---LEPGY----------------PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G G+D+H+ L+ Y L +GG+ + + +HSDGD++ H +VD+ILGALG DIG +FPD D K K S++F++ A L+ + Y+IGN+D +I Q PK+S ++ I N+S +L D + ++ Sbjct: 65 RIGQGYDIHKIKVLDEEYNTYANNDFNKNEQSFKTLTLGGVKINNVLVL-SHSDGDIIYHSIVDSILGALGSLDIGTLFPDKDEKNKNKNSAIFLRYARLLIYKKNYDIGNVDINVIAQVPKISNIRKNIIKNISTVLNIDESQIS 209 HSP 2 Score: 25.7942 bits (55), Expect = 8.079e-20 Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 2 Query: 698 ESETHEKVDSLGENRSIAAHTVILLMKK 781 + +THEK+ +GE ++I ILL+ K Sbjct: 211 KGKTHEKLGVIGEKKAIECFANILLIPK 238
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PLAF7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Plasmodium falciparum (isolate 3D7) GN=ISPF PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.079e-20 Identity = 52/146 (35.62%), Postives = 84/146 (57.53%), Query Frame = 3 Query: 315 RVGHGFDLHR---LEPGY----------------PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G G+D+H+ L+ Y L +GG+ + + +HSDGD++ H +VD+ILGALG DIG +FPD D K K S++F++ A L+ + Y+IGN+D +I Q PK+S ++ I N+S +L D + ++ Sbjct: 65 RIGQGYDIHKIKVLDEEYNTYANNDFNKNEQSFKTLTLGGVKINNVLVL-SHSDGDIIYHSIVDSILGALGSLDIGTLFPDKDEKNKNKNSAIFLRYARLLIYKKNYDIGNVDINVIAQVPKISNIRKNIIKNISTVLNIDESQIS 209 HSP 2 Score: 25.7942 bits (55), Expect = 8.079e-20 Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 2 Query: 698 ESETHEKVDSLGENRSIAAHTVILLMKK 781 + +THEK+ +GE ++I ILL+ K Sbjct: 211 KGKTHEKLGVIGEKKAIECFANILLIPK 238
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CORU7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=ispF PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.028e-20 Identity = 51/125 (40.80%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTV 689 RVG D H++EPG P + G+ GCE HSDGDV+ H +VDA+L A GL D+G ++ G I E +L+ E G+ IGN+ A +I RPK+ P +E L+EL+GA +V Sbjct: 8 RVGIASDAHQVEPGKPCWMAGLLFEDADGCEGHSDGDVVSHVIVDALLSASGLGDLGSFVGVGRKEYDGVSGERLITECRQLLAENGFTIGNVAAQMIGNRPKMGPRREEAERRLTELVGAPVSV 132
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PSYCK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Psychrobacter cryohalolentis (strain K5) GN=ispF PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.179e-19 Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 3 Query: 315 RVGHGFDLHRL----EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 680 ++G G D+H + +++ G+ + H AHSDGDV+LH + DA+LGAL L DIGQ FPD+D G S V ++ + AGY +GN D T++ +RPKL+P+ +R N++ L D Sbjct: 5 KIGQGIDVHAFHNNGQQQQYVVLAGVPIDHTHSLLAHSDGDVVLHALADALLGALALGDIGQHFPDTDAANAGLDSRVLLRYVYGKVLAAGYILGNADITVMCERPKLAPHNLAMRANIASDLQTD 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_CLAM3 (Bifunctional enzyme ispD/ispF OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=ispDF PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.540e-19 Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGA 677 R G G D+H ++ PL + G++ P E G HSDGD + H + DA+L A GL DIG IF DP+ GA VF++ L+ +AGY I N+ ++ RPKLSP + LS +GA Sbjct: 258 RSGIGTDVHAVDASQPLWLAGLHWPGEAGLAGHSDGDAVSHAMCDALLSAAGLGDIGGIFGTDDPELDGAHGEVFLRRTAELVRDAGYRIVNVAVQVMAVRPKLSPRRAEAERILSAAVGA 378 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |