EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_LISIN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Listeria innocua GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 61/127 (48.03%), Postives = 92/127 (72.44%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G G+D+H+L+ LIIGGI +P+E+G HSD DVLLH + DAI+GA+G DIG FPD+D +K A S+ + E R ++ G+++GNLDAT+I ++PK++PY E ++ ++ELL A+P+ VN Sbjct: 3 RIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ERWT9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 63/127 (49.61%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H PLIIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++FPD+D +KGA S ++EA+R + + GY +GN+D T+I Q PK+ P+ +R N++E LG VN Sbjct: 2 RIGHGFDVHAFGGEGPLIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDEAYKGADSRELLREALRQIAQKGYRVGNVDVTIIAQAPKMLPHAPQMRINIAEDLGIHMDEVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CLOD6 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Clostridium difficile (strain 630) GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 60/127 (47.24%), Postives = 92/127 (72.44%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G G+D+H+L LIIGG+ +PH++G HSD DVL+H ++D+ILGAL L DIG+ FPD+D ++KGA S ++ L+ GY+IGN+D+T+I Q PK++PY E++R+N+S++L D +N Sbjct: 2 RIGLGYDVHKLTEDRKLIIGGVEIPHDKGLLGHSDADVLIHAIMDSILGALALGDIGKHFPDTDEEYKGADSMKLLEHVYNLITSKGYKIGNIDSTIIAQSPKMAPYIESMRSNISKVLNTDIDNIN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BACSU (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus subtilis GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 65/128 (50.78%), Postives = 90/128 (70.31%), Query Frame = 3 Query: 312 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S ++ ++ + GY +GN+D T+I Q+PK+ PY E +R ++E L AD + VN Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BACA2 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 64/128 (50.00%), Postives = 90/128 (70.31%), Query Frame = 3 Query: 312 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 FR+G GFD+H+L G PLIIGGI +P+E+G HSD DVLLH V DA LGA G DIG+ FPD+DP++K A S ++ ++ E GY +GN+D T+I Q+PK++P+ + +R ++E L AD + VN Sbjct: 2 FRIGQGFDVHQLTEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAAGEGDIGKHFPDTDPEFKDADSFKLLQHVWNIVKEKGYVLGNIDCTIIAQKPKMAPHIDAMRKRIAEGLEADVSQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ALKMQ (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=ispF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.754e-31 Identity = 64/127 (50.39%), Postives = 87/127 (68.50%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 RVG G+D+HRL G LI+GG+ +PHE+G HSD DVLLH + DA+LGA+ L DIG+ FPD+D K+KG S + E R++ E Y N+DAT+I Q PK++PY E +R N++E+LG VN Sbjct: 2 RVGIGYDVHRLVEGRKLIVGGVEIPHEKGLLGHSDADVLLHAIKDALLGAVALGDIGKHFPDTDEKYKGESSLYLLNEVGRMLAEKAYVANNIDATIIAQEPKMAPYIELMRRNIAEVLGIKVEQVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_THEEB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.290e-31 Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 680 + R+G+G+D+HRL P PLI+GGI + H G HSD DVL H ++DA+LGAL L DIG FP SDP+W GA S V + + L+ E G+ +GN+DA ++ +RPKL PY + +R L+ LG D Sbjct: 2 MKIRIGNGYDIHRLVPERPLILGGIRLEHACGLLGHSDADVLTHAIMDALLGALSLGDIGHYFPPSDPQWAGADSQVLLAKVAALIAERGWRVGNIDAVVVAERPKLKPYLDPMRDRLATTLGID 126
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SHEPA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ispF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.290e-31 Identity = 65/130 (50.00%), Postives = 90/130 (69.23%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 + R+GHGFD+H+ PLI+GGI VP+E G AHSDGDV+LH + DAILGA+ L DIG+ FPD+DP +KGA S V ++ +L + GY + NLD T+I Q PK++P+ E IR L+E L ++ +N Sbjct: 1 MKIRIGHGFDVHKFGGEPPLILGGITVPYEVGLIAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDPDFKGADSRVLLRHCYKLAMDMGYSLSNLDVTVIAQAPKMAPHIEAIRAVLAEDLASEICDIN 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SHELP (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ispF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.290e-31 Identity = 64/127 (50.39%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H+ PLI+GG+ VP++ G AHSDGDV+LH + DAILGA+ L DIG+ FPD+DP +KGA S V ++ +L + GY +GNLD T+I Q PK+ P+ + IR LS L +D +N Sbjct: 4 RIGHGFDVHKFGGELPLILGGVEVPYDTGLVAHSDGDVVLHAISDAILGAMALGDIGKHFPDTDPDFKGADSRVLLRHCYQLALDKGYRLGNLDVTIIAQAPKMLPHIQAIRECLSADLESDIEAIN 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURTA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ispF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.290e-31 Identity = 62/130 (47.69%), Postives = 90/130 (69.23%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ LG VN Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECAARVAQAGFSIRNVDSTIIAQAPKLAPHIDAMRANIAADLGLPLDRVN 130 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |