EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PORG3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=ispF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.991e-31 Identity = 59/121 (48.76%), Postives = 86/121 (71.07%), Query Frame = 3 Query: 309 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 671 PFR+G GFD+HRL GYPL +GG+ + H +G E HSD DVL+H + DA+LGA L DIG FP SDP++KG S + + A+ L+ GYE+GN+DAT+ ++PKL+P+ ++ L+E++ Sbjct: 4 PFRIGFGFDVHRLSEGYPLWMGGVRLEHSKGLEGHSDADVLIHAICDALLGAAALRDIGYHFPPSDPQYKGIDSKILLARAMELVRSQGYELGNIDATIAAEQPKLNPHIPDMQRVLAEVI 124
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_GEOLS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=ispF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.991e-31 Identity = 61/127 (48.03%), Postives = 89/127 (70.08%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHG+D+HRL LI+GG+++P E+G HSD DVLLH + DA+LGAL + DIG+ FPD+DP +KGA S ++ V L+ GY +GNLDAT+I QRPK++P+ + +R N++ G + +N Sbjct: 2 RIGHGYDVHRLVEDRKLIMGGVDIPWEKGLLGHSDADVLLHAIADALLGALAMGDIGKHFPDTDPAFKGADSMKLLEHVVGLIRTQGYAVGNLDATIIAQRPKMAPHIQAMRENVARACGVEVDRIN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_DECAR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Dechloromonas aromatica (strain RCB) GN=ispF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.991e-31 Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 312 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 FRVG G+D+H+L G LI+GG+ +PH G HSD D LLH + DA+LGA+ L DIG+ FPD+DP++KGA S V ++ AV L+ E G+ N+DATLI Q+PKL+P+ + N++ LG P VN Sbjct: 3 FRVGQGYDVHKLVDGRKLILGGVEIPHPTGLLGHSDADALLHAITDALLGAVALGDIGRHFPDTDPRYKGADSRVLLRAAVALLAERGWRPVNVDATLIAQQPKLAPHAVAMVANVAADLGISPDCVN 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CALS8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=ispF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.991e-31 Identity = 60/128 (46.88%), Postives = 89/128 (69.53%), Query Frame = 3 Query: 312 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 F+VG GFD+HR LI+GG+ +P E+G HSD DVL+H ++DAILGA+G DIG++FPD+D K+K S V +KE +L+ G I N+D T++ Q+PK+SPY + ++TN+++ L + T VN Sbjct: 2 FKVGFGFDVHRFSEDRKLILGGVEIPFEKGLLGHSDADVLIHAIIDAILGAMGENDIGRLFPDTDMKYKDISSIVLLKEVSKLLKNKGMSIINIDTTIVAQKPKISPYTDEMKTNIAKALNIEKTQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_GEOKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacillus kaustophilus GN=ispF PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.907e-31 Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 312 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 FR+G GFD+H+L G PLIIGG+ +P+E+G HSD DVLLH V DA LGA+G DIG+ FPD+DP++K A S+ + L + GY + N D T+I Q+PKL+PY E +R ++ LL A+ + VN Sbjct: 2 FRIGQGFDVHQLVEGRPLIIGGVTIPYEKGLLGHSDADVLLHAVADACLGAIGAGDIGRHFPDTDPRFKDADSAELLAHVWALARQEGYRLVNADCTIIAQKPKLAPYIEEMRAVIARLLEAERSQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CUPTR (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ispF PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.907e-31 Identity = 65/122 (53.28%), Postives = 86/122 (70.49%), Query Frame = 3 Query: 306 LPF--RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSE 665 +PF RVG G+D+H L PG LI+GG+ +PH+RG HSD D LLH V DA+ GA L DIG+ FPD+D ++ GA S ++EA R + EAGYEIGN+DAT+I Q PKL+P+ + NL+E Sbjct: 2 MPFDIRVGQGYDVHALVPGRKLILGGVEIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHFPDTDAQFAGADSRALLREAARRVREAGYEIGNVDATVIAQAPKLAPHIGAMVANLAE 123
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_AZOSE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azoarcus sp. (strain EbN1) GN=ispF PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 4.960e-31 Identity = 62/129 (48.06%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 309 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 PFR+G GFD+H L PG LI+GG+++P ERG HSD DVLLH + DA+LGA GL DIG++FPD+D GA S V ++EA + AG+ + N+DAT+I + P++ P+ + N++ LG D VN Sbjct: 4 PFRIGQGFDVHALVPGRALIVGGVHIPFERGLLGHSDADVLLHALTDALLGAAGLGDIGRLFPDTDAAHAGADSRVLLREAFAAVRAAGFGVVNVDATVICRAPRILPHAPAMVANIAADLGIDAAAVN 132 HSP 2 Score: 23.0978 bits (48), Expect = 4.960e-31 Identity = 11/27 (40.74%), Postives = 15/27 (55.56%), Query Frame = 2 Query: 698 ESETHEKVDSLGENRSIAAHTVILLMK 778 + +T EK+ G IAA V LLM+ Sbjct: 134 KGKTTEKLGFTGRGEGIAAQVVALLMR 160
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SYMTH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Symbiobacterium thermophilum GN=ispF PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 4.971e-31 Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 318 VGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 +G G+D+HRL PG PL++GG+ +P +RG E HSD DV LH ++DA+LGA GL DIG FP +DP W GA S ++ V L+ E GY N D T++ +RPK+ PY +R + +LG +P V+ Sbjct: 3 IGFGYDVHRLVPGRPLVLGGVEIPSKRGLEGHSDADVALHALMDALLGAAGLGDIGTHFPPTDPAWAGANSLDLLRRVVGLLAEEGYRPVNCDITVVAERPKIGPYVPAMRERIGAVLGVEPRRVS 128 HSP 2 Score: 23.8682 bits (50), Expect = 4.971e-31 Identity = 10/31 (32.26%), Postives = 18/31 (58.06%), Query Frame = 2 Query: 680 PHRCKSESETHEKVDSLGENRSIAAHTVILL 772 P R ++ T+E++ +G IAA+ V L+ Sbjct: 124 PRRVSIKATTNEQMGFVGREEGIAAYAVALI 154
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_XYLFA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Xylella fastidiosa GN=ispF PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.103e-31 Identity = 63/130 (48.46%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 L R+G G+D+H PG +++GG+ VPH G AHSDGDV+LH + DA+LGALGL DIGQ FP SD +WKGA S VF++ L+ E + +GN+DAT I + PK++PY +R ++ LL P V+ Sbjct: 13 LNVRIGQGYDVHAFGPGDHVMLGGVRVPHRCGVLAHSDGDVILHALCDAMLGALGLGDIGQHFPPSDVRWKGADSGVFVRHCHLLLRERDWCVGNVDATAICESPKIAPYVNAMREGIARLLEVQPECVS 142
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_DESAA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=ispF PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.103e-31 Identity = 61/127 (48.03%), Postives = 90/127 (70.87%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 RVG+G+D+HRL G PL++GG+ +P ++G + HSD DVLLH V DA+LGA GL DIG FPD DPK+K S+ ++E R + + GY+I NLDATL+ + PK+ PY++ + + +++ LG + VN Sbjct: 2 RVGYGYDVHRLVDGRPLVLGGVTIPFDKGLKGHSDADVLLHAVCDALLGAAGLGDIGMHFPDKDPKYKNIASTRLLEETGRKIAQEGYKIVNLDATLVAEAPKIGPYRQEMVSVIAKCLGLENRQVN 128 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |