EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BORPD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ispF PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.103e-31 Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 +PFRVG G+D+H L G PLIIGG+ +PH G + HSD DVLLH V DA+LGA GL DIG+ FPD+DP ++GA S V +++AV + AG+ N+DAT+ Q PK+ P+ + N++ G D VN Sbjct: 3 VPFRVGQGYDVHALVAGRPLIIGGVTIPHTHGLQGHSDADVLLHAVTDALLGAAGLGDIGRHFPDTDPAYRGADSRVLLRDAVAKVRAAGWAPVNIDATVHAQAPKIGPHAGAMVANIAADAGIDSASVN 132
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_NOVAD (Bifunctional enzyme ispD/ispF OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ispDF PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 5.103e-31 Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R G GFD+HRL G L + G+N+PH +G HSD DV +H +VDA+LGA+ DIG FP SDP+WKGA S F+ A L+ EAGY I N+D T+I + PK+ P+K +R L+ +LG D +V+ Sbjct: 231 RTGMGFDVHRLVEGEELWLCGVNIPHGKGLSGHSDADVAIHALVDALLGAIAAGDIGDHFPPSDPQWKGASSDRFLAHAGTLVTEAGYRIANVDVTIICEAPKIGPHKAAMRETLARILGIDSALVS 357
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SHESH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella sediminis (strain HAW-EB3) GN=ispF PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.664e-31 Identity = 62/127 (48.82%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H+ G PL++GG+++P+E G AHSDGDV+LH + DA+LGA+ L DIG+ FPD+D ++KGA S ++ RL E GY +GNLD T+I Q PK++P+ E IR L+ D +N Sbjct: 4 RIGHGFDVHKFGGGSPLLLGGVHIPYETGLIAHSDGDVVLHAISDAVLGAVALGDIGKHFPDTDEEFKGADSRHLLRHCYRLAKEKGYSMGNLDVTIIAQAPKMAPHIEAIREVLALDFETDTDNIN 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SHEHH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ispF PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.664e-31 Identity = 64/130 (49.23%), Postives = 90/130 (69.23%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 + R+GHGFD+H+ PLI+GG++VP+E G AHSDGDV LH + DAILGA+ L DIG+ FPD+DP++KGA S V ++ +L + G+ + NLD T+I Q PK++P+ E IR L+ L AD +N Sbjct: 1 MKIRIGHGFDVHKFGGEPPLILGGVDVPYEVGLIAHSDGDVALHAISDAILGAMALGDIGKHFPDTDPEFKGADSRVLLRHCYQLATDMGFSLSNLDVTIIAQAPKMAPHIEAIRKVLAADLVADINDIN 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_VIBVY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=ispF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.704e-31 Identity = 62/127 (48.82%), Postives = 87/127 (68.50%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H+ P+IIGG+ VP+E+G AHSDGDV LH + DA+LGA+ DIG+ FPD+D KWKGA S +K+ R + E GY++GN D T+I Q PK++PY + +R ++ L D +N Sbjct: 3 RIGHGFDVHKFGGEGPVIIGGVAVPYEQGLIAHSDGDVALHALSDALLGAIAAGDIGRHFPDTDDKWKGADSRELLKDVYRRVKEQGYKLGNADVTIIAQAPKMAPYIDAMREAIAHDLETDIRNIN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PORGI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Porphyromonas gingivalis GN=ispF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.704e-31 Identity = 58/121 (47.93%), Postives = 85/121 (70.25%), Query Frame = 3 Query: 309 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELL 671 PFR+G GFD+HRL GYPL +GG+ + H +G E HSD DVL+H + DA+LGA L DIG FP SDP++KG S + + + L+ GYE+GN+DAT+ ++PKL+P+ ++ L+E++ Sbjct: 4 PFRIGFGFDVHRLSEGYPLWMGGVRLEHSKGLEGHSDADVLIHAICDALLGAAALRDIGYHFPPSDPQYKGIDSKILLARVMELVRSQGYELGNIDATIAAEQPKLNPHIPDMQRVLAEVI 124
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_CYAP4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.704e-31 Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADP 683 R+G+G+D+HRL PLI+GG+N+PHE G HSD DVL H ++DA+LGAL L DIG FP DP+W GA S + + +L+ E G+++GN+D+ ++ +RPKL P+ +R LS +L P Sbjct: 5 RIGNGYDIHRLVSDRPLILGGVNIPHELGLLGHSDADVLTHAIMDALLGALSLGDIGHYFPPGDPQWAGADSLKLLAQVHQLVQERGWQVGNIDSVIVAERPKLKPHLAAMRDRLSAVLKVKP 127
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BACSK (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus clausii (strain KSM-K16) GN=ispF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.704e-31 Identity = 59/122 (48.36%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 680 R+G GFD+H+L G PL++GG+++PH +G HSD DVLLH + DA LGA+G D+G+ FPD+D +K A S + +A +L+ AGY +GN+D T++ Q+PKL+PY E +R ++ELL D Sbjct: 3 RIGQGFDVHQLTEGRPLLLGGVHIPHPKGLLGHSDADVLLHTITDAALGAIGAGDLGKHFPDTDEAFKDADSKHLLSQAWQLVKNAGYTLGNVDCTVMAQKPKLAPYIEAMRKQIAELLETD 124
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PSEE4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas entomophila (strain L48) GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.137e-30 Identity = 60/127 (47.24%), Postives = 91/127 (71.65%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA L DIG+ FPD+DP++KGA S V ++ V ++D G+++GN+DAT++ Q PK++P+ ET+R ++ L + VN Sbjct: 2 RIGHGYDVHRFCDGDFITLGGVRIPHKYGLLAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPQFKGADSRVLLRHVVGIVDNKGWKVGNVDATIVAQAPKMAPHIETMRQQIAADLQVELDQVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_FUSNN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Fusobacterium nucleatum subsp. nucleatum GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.137e-30 Identity = 59/127 (46.46%), Postives = 91/127 (71.65%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+G+G+D+H+L G L++GG+ VPH +G HSDGDVLLH + DAI+GALGL DIG FPD+D K S++ +K+ +M E Y+I NLD+ +++Q+PKL PY ++IR N++++L + ++N Sbjct: 3 RIGNGYDVHKLVEGRKLMLGGVEVPHTKGVLGHSDGDVLLHAITDAIIGALGLGDIGLHFPDNDENLKDIDSAILLKKINNIMKEKNYKIVNLDSIIVMQKPKLRPYIDSIRDNIAKILEINSELIN 129 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |