EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_AZOSB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azoarcus sp. (strain BH72) GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.137e-30 Identity = 63/129 (48.84%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 309 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 PFRVG GFD+H L PG LI+GG+++P G HSD DVLLH + DA+LGA GL DIG++FPD+DP GA S V ++EA + AG+E N+DATLI + P++ P+ + N++ LG D +N Sbjct: 4 PFRVGQGFDVHALVPGRALIVGGVDIPFSAGLLGHSDADVLLHALTDALLGAAGLGDIGRLFPDTDPAHAGADSRVLLREAYARVKAAGWEAVNVDATLICRAPRILPHAPAMVVNIAADLGMDAAAIN 132
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ALHEH (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.137e-30 Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 3 Query: 315 RVGHGFDLHRL-EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 RVG GFD HR EPG PLI+GG+ VPHERG AHSDGDVL+H V D +LGA G D+G FPDSD +KG S + +++A++ + G+ + N+DATLI Q P+++P+ +R +L+ L P+ VN Sbjct: 3 RVGQGFDAHRFGEPGTPLILGGVQVPHERGLAAHSDGDVLMHAVTDGLLGAAGEGDLGTHFPDSDDAYKGIDSRILLRDALQRVRAGGWRVVNVDATLIAQAPRMNPHVGAMRDHLAADLEVAPSAVN 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ACAM1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Acaryochloris marina (strain MBIC 11017) GN=ispF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.137e-30 Identity = 56/126 (44.44%), Postives = 89/126 (70.63%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVV 692 R+G+G+D+H+L G PLI+GG+ + H G + HSD DVL H ++DA+LGAL L DIG FP +DPKW GA S +++ +L+ + G++IGN+D+ ++ +RPKL P+ E +R +S++L P ++ Sbjct: 5 RIGNGYDIHQLVEGRPLILGGVQIEHSLGLKGHSDADVLTHAIMDALLGALSLGDIGHYFPPTDPKWAGADSLKLLEQVHQLILDRGWQIGNIDSVVVAERPKLKPHIEAMRDRISQVLNLSPELI 130
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_SERP5 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Serratia proteamaculans (strain 568) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H+ PL+IGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S V ++EA + + GY +GNLD T+I Q PK++P+ +R L+E L VN Sbjct: 2 RIGHGFDVHKFGGEGPLVIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRVLLREAWKRIRAKGYRLGNLDITIIAQAPKMAPHIPQMRVFLAEDLQCHMDDVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PSEMY (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pseudomonas mendocina (strain ymp) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 60/127 (47.24%), Postives = 90/127 (70.87%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHG+D+HR G + +GG+ +PH+ G AHSDGDVLLH + DA+LGA+ L DIG+ FPD+DP +KGA S ++ + L+ GY +GN+DAT+I Q PK++P+ +++R ++E LG + VN Sbjct: 2 RIGHGYDVHRFGEGDFITLGGVRIPHKFGLVAHSDGDVLLHALSDALLGAVALGDIGKHFPDTDPTFKGADSRALLRHVMSLVRGKGYAVGNVDATIIAQAPKMAPHIQSMRERIAEDLGVELDQVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PHOLL (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Photorhabdus luminescens subsp. laumondii GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 61/117 (52.14%), Postives = 82/117 (70.09%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSE 665 R+GHGFD+H+ P+IIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KG S ++EA + E GY IGNLD T+I Q PK+ P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGGEGPIIIGGVRIPYEQGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGVDSRKLLREAYSRIREKGYRIGNLDITIIAQAPKMLPHIPQMRVNLAE 118
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_PELPD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Pelobacter propionicus (strain DSM 2379) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 63/127 (49.61%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHG+D+H+L G LI+GG+++P E+G HSD DVLLH + DAILGALG DIG+ FPD+DP +KGA S ++ L GY +GNLDAT+I QRPK++P+ +R N++ +L + VN Sbjct: 2 RIGHGYDVHKLVEGRKLIMGGVDIPWEKGLLGHSDADVLLHAIADAILGALGEGDIGKHFPDTDPAYKGADSLKLLEHVANLAIAKGYCLGNLDATIIAQRPKMAPHIPAMRENIARVLRSTVDRVN 128
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_HAEIN (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae GN=ispF PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H PLIIGG+ VP+ G AHSDGDV LH + DAILGA L DIG++FPD+D ++K A S ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R ++E L D VN Sbjct: 3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_HAEIE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Haemophilus influenzae (strain PittEE) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 R+GHGFD+H PLIIGG+ VP+ G AHSDGDV LH + DAILGA L DIG++FPD+D ++K A S ++EA R + E GY+IGN+D T+I Q PK+ P+ + +R ++E L D VN Sbjct: 3 RIGHGFDVHAFGEDRPLIIGGVEVPYHTGFIAHSDGDVALHALTDAILGAAALGDIGKLFPDTDMQYKNADSRGLLREAFRQVQEKGYKIGNVDITIIAQAPKMRPHIDAMRAKIAEDLQCDIEQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURPS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia pseudomallei GN=ispF PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |