EY660988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURP6 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia pseudomallei (strain 668) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURP1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia pseudomallei (strain 1710b) GN=ispF PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURP0 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia pseudomallei (strain 1106a) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURMS (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain SAVP1) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURMA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURM9 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain NCTC 10229) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_BURM7 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Burkholderia mallei (strain NCTC 10247) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 306 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLS 662 + FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG+ F D+DP++KGA S ++E + +AG+ I N+D+T+I Q PKL+P+ + +R N++ Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIA 119
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_ANATD (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=ispF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 59/128 (46.09%), Postives = 89/128 (69.53%), Query Frame = 3 Query: 312 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGADPTVVN 695 F+VG G+D+HR G LI+GG+ +P E+G HSD DVL+H ++DAILGA+G DIG++FPDS P +K S V +KE +L++E +I N+D+T++ QRPK+SPY ++ +++ L + T VN Sbjct: 2 FKVGIGYDVHRFVEGRKLILGGVEIPFEKGLLGHSDADVLVHAIIDAILGAMGENDIGRLFPDSSPNYKDISSLVLLKEVAKLLEEKNMKIVNIDSTVVSQRPKISPYTNEMKNKIADCLKIESTQVN 129
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPDF_SILST (Bifunctional enzyme ispD/ispF OS=Silicibacter sp. (strain TM1040) GN=ispDF PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.485e-30 Identity = 57/122 (46.72%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 315 RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSELLGAD 680 R+G+G+D+HR PG +++ G+ VPHERG + HSD DV +H V DA+ GA+ DIG+ FP SDP+WKGA S +F++ AV L G+ I N+D TL+ + PK+ P+ E +R ++E++G D Sbjct: 227 RLGNGYDVHRFGPGDHVMLCGVQVPHERGLQGHSDADVGMHAVTDALYGAMAEGDIGRHFPPSDPQWKGAASDIFLRHAVELARSKGFTINNVDCTLVCEYPKVGPHAEAMRARMAEIMGMD 348
BLAST of EY660988 vs. ExPASy Swiss-Prot
Match: ISPF_YERPB (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ispF PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.939e-30 Identity = 64/119 (53.78%), Postives = 87/119 (73.11%), Query Frame = 3 Query: 315 RVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMDEAGYEIGNLDATLILQRPKLSPYKETIRTNLSE 665 R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++FPD+DP +KGA S ++EA R + GY++GNLD T+I Q PK++P+ +R NL+E Sbjct: 2 RIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKLFPDTDPAFKGADSRGLLREAYRCILAKGYKLGNLDITIIAQAPKMAPHIPQMRVNLAE 120 The following BLAST results are available for this feature:
BLAST of EY660988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660988 ID=EY660988; Name=EY660988; organism=Citrus sinensis; type=EST; length=916bpback to top |