EY660964

Overview
NameEY660964
Unique NameEY660964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.461e-17
Identity = 68/265 (25.66%), Postives = 117/265 (44.15%), Query Frame = 3
Query:  171 PLEIPIIDFGLLTSPSSSAQELEKLRSALCSWGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGNDKMQTL----LWSHLLYLTVHPEDKRQ--LKFWPE---NPEYFRETLDEISKKLEVINQILLKAFARSLNMEENCFLDMFGEQAL-----MLARFNWYPPCPRPDLVLGVFPHSDGSGLTVLLPDKEVGGLQFLK--DNQWYSVPVISRSFXGNIGDQLEIISMGYSRAPYTSVDKSEREDFLAM 917
            P  +P++D   +  P ++    E +  A   WG F  + HGV    L +V  A    FALP +EK +  +  G   GYG+  + +     +WS     T  P + R    K WP+   +  +F   ++E  +++  +   LL+ F  +L +       +  EQ +          NWYP CP P   LG+  H+D SG    +    V GLQ  +   ++W +VP +  +   N+GD  +I++ G   + Y     +   D +++
Sbjct:   46 PDAVPVVD---MRDPFAA----EAVGLAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSE--GYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTD-SGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISL 300          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17
Identity = 67/251 (26.69%), Postives = 111/251 (44.22%), Query Frame = 3
Query:  171 PLEIPIIDFGLLTSPSSSAQELEKLRSALCSWGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGNDKMQTL----LWSHLLYLTVHPEDKRQ--LKFWPE---NPEYFRETLDEISKKLEVINQILLKAFARSLNMEENCFLDMFGEQAL-----MLARFNWYPPCPRPDLVLGVFPHSDGSGLTVLLPDKEVGGLQFLK--DNQWYSVPVISRSFXGNIGDQLEIISMGYSRAPY 875
            P  +P++D   +  P ++    E +  A   WG F    HGV    L +V  A    FALP +EK +  +  G   GYG+  + +     +WS     T  P + R    K WP+   +  +F   ++E  +++  +   LL+ F  +L +       +  EQ +          NWYP CP P   LG+  H+D SG    +    V GLQ  +   ++W +VP +  +   N+GD  +I++ G   + Y
Sbjct:   46 PDAVPVVD---MRDPCAA----EAVALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSE--GYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTD-SGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVY 286          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17
Identity = 68/236 (28.81%), Postives = 107/236 (45.34%), Query Frame = 3
Query:  180 IPIIDFG-LLTSPSSSAQELEKLRSALCSWGCFQAINHGVE----PAFLNKVR-------EATKQFFALPLAEKKKYYQEDGSFEGYGNDKMQTLLWSHLLYLTVHPEDKRQLKFWPENPEYFRETLDEISKKLEVINQILLKAFARSLNMEENCFLDMFGEQALMLARFNWYPPCPRPDLVLGVFPHSDGSGLTVLLPDKEVGGLQFLKDNQWYSVPVISRSFXGNIGDQLEIIS 851
            IP ID G +  S       + K++ A+  +G FQAINHGV        +N +R       E  K F+     +K KY+     +E           W   L   + P+  +      + PE   E + E SK++  + +++ +  + +L +  N   +M   + L +   + +PPCP P+   G   H+D S LT+LL D   GGLQ L D  W  VP    +   N+GD L++IS
Sbjct:   55 IPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYES------PAASWRDTLSCVMAPDVPKA----QDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWML-CHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVLYDGYWIDVPPNPEALIFNVGDFLQLIS 278          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.062e-16
Identity = 68/251 (27.09%), Postives = 110/251 (43.82%), Query Frame = 3
Query:  171 PLEIPIIDFGLLTSPSSSAQELEKLRSALCSWGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGNDKMQTL----LWSHLLYLTVHPEDKRQ--LKFWPE---NPEYFRETLDEISKKLEVINQILLKAF--ARSLNMEENCFLD---MFGEQALMLARFNWYPPCPRPDLVLGVFPHSDGSGLTVLLPDKEVGGLQFLK--DNQWYSVPVISRSFXGNIGDQLEIISMGYSRAPY 875
            P  +P++D   +  P ++    E +  A   WG F    HGV    L  V  A    FALP +EK +  +  G   GYG+  + +     +WS     T  P + R    K WP+   +  +F   ++E  +++  +   LL+ F  A  L  E+   ++      E        NWYP CP P   LG+  H+D SG    +    V GLQ  +   ++W +VP +  +   N+GD  +I++ G   + Y
Sbjct:   46 PDAVPVVD---MRDPCAA----EAVALAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSE--GYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTD-SGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVY 286          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.143e-14
Identity = 71/266 (26.69%), Postives = 112/266 (42.11%), Query Frame = 3
Query:   93 SLAAKKALENYIQKGSDAGTFDASLPPLEIPIIDFGLLTSPSSSAQELEKLRSALCSWGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGNDKMQTL----LWSHLLYLTVHPEDKRQLKFWPENPEYFRETLDEISKKLEVINQILLKAFARSL-----NMEENCFLDMFGEQALMLA-RFNWYPPCPRPDLVLGVFPHSDGSGLTVLLPDKEVGGLQ-FLKDNQWYSVPVISRSFXGNIGDQLEIISMG 857
            S   K    + + + S A +FDA      IP+ID   L++P  +      +  A  +WG FQ  NHG+    L+ +   +K  F +P   K +    D    GYG  ++       +WS    +            WP +   +   + E   ++E +   LL     SL     ++E    L+  G +    A R N YP CP P+  +G+  H+D + LT+ L     GGLQ F +++ W +V         NIGD   I+S G
Sbjct:   22 SFTWKLTAADSLLRPSSAVSFDAVEE--SIPVID---LSNPDVTTL----IGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTI-LHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNG 277          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 66/232 (28.45%), Postives = 104/232 (44.83%), Query Frame = 3
Query:  219 SSAQELEKLRSALCSWGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGNDKM----QTLLWSHLLYLTVHPEDKRQLKFWPENPEYFRETLDEISKKLEVINQILLKAFARSLNM--EENCFL--DMFGEQALMLARF---NWYPPCPRPDLVLGVFPHSDGSGLTVL----LPDKEVGGLQFLKDNQWYSVPVISRSFXGNIGDQLEIISMGYSRA 869
            S+ +E   LR A   WG F   +HGV  + L+ V    K+ F+LP+  K    +      GYG  ++      L+WS    +      +     WP++   F   ++E  K ++ ++  L+     SL +  E+  +L  D  G     +  F   N YP CP P L +G+ PH+D S LT+L    +P  E+   Q  + ++W  V  I  S    +GD   IIS G  R+
Sbjct:   53 SNPEEHGLLRQACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQ-EEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRS 283          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.950e-14
Identity = 67/252 (26.59%), Postives = 106/252 (42.06%), Query Frame = 3
Query:  174 LEIPIIDFGLLTSPSSSAQELEKLRSALCSWGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGND----KMQTLLWSHLL---YLTVHPEDKRQ-------LKFWPENPEYFRETLDEISKKLEVINQILLKAFARSLNM--EENCFLDMFGEQALMLARFNWYPPCPRPDLVLGVFPHSDGSGLTVLLPDKEVGGLQFLKDNQWYSVPVISRSFXGNIGDQLEIISMGYSRAPYTS 881
            LE+ +ID G     SS  +++ +   A    G F  +NHG+E A L +       FF LPL EK++  +  G   GY +         L W   L   Y +   E+  +        K   E+     E       ++  ++  L++    SL +  +   +   F ++   + R N+YP C RP   LG  PH D + LT+L  D  VGGL+   + +W ++     +   N+GD      M  S A Y S
Sbjct:   44 LEVALIDVGAGAERSSVVRQVGE---ACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVWAEGRWRAIRPRPGALVVNVGDTF----MALSNARYRS 287          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.950e-14
Identity = 69/245 (28.16%), Postives = 108/245 (44.08%), Query Frame = 3
Query:  171 PLEIPIIDFGLLTSPSSSAQELEKLRSALCS-WGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGNDKMQT---LLWSHLLYLTVHPEDKRQLKFWP---ENPEYFRETLDEISKKLEVINQILLKAFARSLNME-ENCFLDMFGEQAL-MLARFNWYPPCPRPDL-------VLGVFPHSDGSGLTVLLPDKEVGGLQFLKDNQWYSVPVISRSFXGNIGDQLEIISMG 857
            P+ IP   F L+     S  E +      C  +G F+ INHGV    ++ +   T  FF+LP +EK    Q  G   GYGN K+     + W   L +  +  D      +P   ++P  FR  L+E +  +  +   +L+     L ++  N    +  +Q    + R N YPPCP  +        V+G   H+D   ++VL  +   G    L D  W SVP    SF  N+GD L++++ G
Sbjct:    7 PVAIPKSGFSLIPVIDMSDPESKHALVKACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKT---QVAGYPFGYGNSKIGRNGDVGWVEYLLMNAN-HDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNG 247          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.678e-14
Identity = 59/236 (25.00%), Postives = 110/236 (46.61%), Query Frame = 3
Query:  180 IPIIDFGLLTSPSSSAQELEKLRSALCSWGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGNDKMQT---LLWSHLLYLTVHPE--DKRQLKFWPENPEYFRETLDEISKKLEVINQILLKAFARSLNMEENCFLDMF--GEQALMLARFNWYPPCPRPD---LVLGVFPHSDGSGLTVLLPDKEVGGLQFLKDNQWYSVPVISRSFXGNIGDQLEIISMG 857
            IP+++   L  P +      ++  A   +G F+ +NHGV P  + ++ +    FF LP + K +    +    GYGN ++     + W   L L  +P+    +    + + P+ FRE+++E  K+++ ++  +L+  A  L +E    L      E++    R N YP         + +G   H+D   ++VL  +   G    +KD  W +VP    SF  N+GD L++++ G
Sbjct:   31 IPVVN---LADPEAKT----RIVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNRAGPPEPY--GYGNKRIGPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNG 257          
BLAST of EY660964 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 62/237 (26.16%), Postives = 106/237 (44.73%), Query Frame = 3
Query:  180 IPIIDFGLLTSPSSSAQELEKLRSALCSWGCFQAINHGVEPAFLNKVREATKQFFALPLAEKKKYYQEDGSFEGYGNDKMQT---LLWSHLLYLTVHPE--DKRQLKFWPENPEYFRETLDEISKKLEVINQILLKAFARSLNMEENCFLDMF--GEQALMLARFNWYPPCPRPDLV----LGVFPHSDGSGLTVLLPDKEVGGLQFLKDNQWYSVPVISRSFXGNIGDQLEIISMG 857
            IP++D   LT P +       + +A   +G F+ +NHGV    +  +     +FF    +EK +    D    GYG+ ++     + W   L L  +P+    + L  + ENP +FR  ++     ++ +   +L+  A  L + +   L      E++    R N YPPCP    +    +G   H+D   ++VL  +   G    L D  W SVP    SF  N+GD L++++ G
Sbjct:   27 IPVVD---LTHPDAK----NLIVNACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDRAGPPDPF--GYGSKRIGPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNG 254          
The following BLAST results are available for this feature:
BLAST of EY660964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
G3O23_WHEAT2.461e-1725.66Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G3O22_WHEAT5.483e-1726.69Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
GSL_ARATH7.161e-1728.81Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G3O21_WHEAT6.062e-1627.09Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
G3OX4_ARATH1.143e-1426.69Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
G3OX3_ARATH1.493e-1428.45Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
GAOX1_ORYSJ1.950e-1426.59Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
G2OX1_ARATH1.950e-1428.16Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G2OX2_ARATH9.678e-1425.00Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G2OX_PHACN3.678e-1326.16Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-027-H11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660964 ID=EY660964; Name=EY660964; organism=Citrus sinensis; type=EST; length=922bp
CCACGCGTCCGAACTGCTCTCGGCAAACACCATGGCTGAAACCACATCTC
CTGCTAAATTGGAAGCACCAACGGAAACACCACAAGAACTCATCATTAGC
GGCAAAGAAAGCATTAGAAAATTACATCCAAAAAGGCAGTGATGCTGGAA
CTTTTGATGCATCTCTGCCACCTCTGGAAATTCCAATAATTGATTTTGGC
CTCTTGACATCTCCTTCATCCAGCGCACAGGAACTTGAGAAACTGCGCTC
AGCTCTCTGCTCCTGGGGCTGCTTCCAGGCAATCAATCATGGAGTAGAAC
CTGCATTCTTGAACAAGGTGCGTGAAGCTACCAAGCAGTTCTTTGCTCTC
CCTCTGGCGGAGAAGAAGAAATATTACCAAGAAGATGGTAGCTTTGAAGG
CTATGGGAATGACAAGATGCAGACACTCCTTTGGAGTCATCTATTGTACC
TTACGGTGCATCCAGAAGATAAAAGACAACTGAAATTCTGGCCTGAAAAC
CCCGAATATTTTAGGGAAACTTTAGATGAAATTTCCAAGAAATTAGAAGT
GATAAATCAAATCCTCCTCAAGGCCTTCGCGAGGTCGTTAAACATGGAAG
AGAATTGCTTTTTGGACATGTTTGGAGAACAAGCATTAATGCTTGCTCGA
TTCAACTGGTACCCTCCATGTCCGAGGCCTGATCTGGTTCTTGGTGTCTT
CCCTCACTCCGATGGATCAGGACTGACAGTGCTCTTGCCAGACAAAGAAG
TTGGAGGTCTTCAATTCCTCAAGGACAATCAATGGTACAGCGTACCAGTC
ATTTCCCGAAGCTTTGNTGGTAACATTGGTGATCAGCTAGAGATAATAAG
TATGGGATATTCACGAGCCCCGTACACGAGTGTTGACAAATCAGAAAGGG
AAGATTTCTTGGCTATGTTCTA
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