EY660921

Overview
NameEY660921
Unique NameEY660921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7606 contig Csv1_Contig7606:1..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24
Identity = 67/179 (37.43%), Postives = 97/179 (54.19%), Query Frame = 3
Query:  267 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQA 800
            +++A A+E+L K   D+   GA+D  T  +N  AF RI  RPR L DVS++D  TT  G +IS PI IAPT    +  P+GE          G     S++++ S+E++    P G+R+FQLYV+ D              GFKA+ +T+DTP  G    DI+N+  L   LTL + Q+
Sbjct:    8 DFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDTRTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAAPEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQ--LRRNLTLTDLQS 184          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.150e-22
Identity = 62/199 (31.16%), Postives = 97/199 (48.74%), Query Frame = 3
Query:  204 P*INLSRKQ---STDKMGEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLK 788
            P +  +R Q   S  ++G    + +   IAK + P+  FDY   GAED+ ++   R  F  I F P IL DV+ +      LG    +P  IAPT   ++ H EGE          G   +LS+ +T ++E++    P G ++FQLY+++D              GF  + +TVD P  G    D++N  ++PP LTL+
Sbjct:   15 PLLQFNRPQFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLR 213          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21
Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 3
Query:  258 NVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLP 770
            NV +Y  + +++LPKMV+DY   GAED++ ++ NR+ F +  F+P+ L+DVS+  +    LG + SMP++I PT +     P+G+          G    LS+ S  S+E++A    G  +FQLYV                 G+  + LT D    G  E D+ NRF +P
Sbjct:    7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVI-HREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIP 176          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.905e-21
Identity = 61/179 (34.08%), Postives = 95/179 (53.07%), Query Frame = 3
Query:  267 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQA 800
            +++A A+++L K  +D+    A+D  T  +N  AF RI  RPR L DVSKID  TT  G +I+ PI I+PTA   +A  +GE               +SS+++ +VE++ +  P G+ +FQLYV  D              GFKA+ +TVD P LG    + ++   L   + LK+ ++
Sbjct:    8 DFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRS 186          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.180e-18
Identity = 60/203 (29.56%), Postives = 91/203 (44.83%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL-------DLGKMDEANDSG 839
            I++  +Y A A+ KLP+ +FDY   GA  + T++ N +  + I  R RIL +V  + + TT  G ++ MP++++P  +  M    GE          G    LS+ S   +EEVAS      +FQLYV KD              G   +  TVD P  G    D  +  + P     +  QA+       D+G M   +D G
Sbjct:    3 ISSASDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVGLMGRPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.380e-17
Identity = 60/198 (30.30%), Postives = 89/198 (44.95%), Query Frame = 3
Query:  267 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQ-------ALDLGKMDEANDSG 839
            +Y A AK KLP  +F Y   G+ D+ TL+ N +    +  R R+L D++ + + T   G K++MPI +AP  +  M    GE          G   T+S+ S   +EEVA       +FQLYV KD              G   +  TVD P  G    D+ +  + P     + FQ       ALD+G + + +D G
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYDERTLKRNTDDLGDVALRQRVLRDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRGEVQAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAKAAGVTTLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVFQAMRHPSWALDVGLLGKPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.543e-16
Identity = 61/197 (30.96%), Postives = 89/197 (45.18%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQALDLGKMDEANDSGL 842
            I++  +Y A AK KLP+ +FDY   GA  + TL+ N +  + I  R R+L +V  + + T   G  ++MPI+++P  +  M    GE               LS+ S  S+EEVAS      +FQLYV KD              G   +  TVD P  G    D  +  + P     +  QA+   K D A + GL
Sbjct:    3 ISSASDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPGARYRDAHSGMSGPYAAPRRILQAMT--KPDWALNVGL 197          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.631e-16
Identity = 62/203 (30.54%), Postives = 90/203 (44.33%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPL-------LTLKNFQALDLGKMDEANDSG 839
            I++  +Y   A+ +LP  +F Y   GA  + TL+ N    S +  R R+L  V ++D++TT L  ++SMP+ +AP  +  M    GE          G   TLS+ S  S+EEV S      +FQLYV KD              G + +  TVD P  G    D  +  + P           L  F A D+G M   +D G
Sbjct:    3 ISSSSDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEVQSQVGKPIWFQLYVLKDRGFMKNALERAWAAGIRTLVFTVDMPVPGARYRDAHSGMSGPNAAFRRMVQAVLHPFWAYDVGLMGTPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16
Identity = 59/198 (29.80%), Postives = 91/198 (45.96%), Query Frame = 3
Query:  267 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL-------DLGKMDEANDSG 839
            +Y A AK KLP  +F Y   G+  + TL+ N +  + I  R R+L D+S++ + T   G K+++PI ++P  +  M    GE          G   TLS+ S   +EEVA +     +FQLYV KD              G K +  TVD P  G    D+ +  + P     +  QA+       D+G + + +D G
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16
Identity = 59/198 (29.80%), Postives = 91/198 (45.96%), Query Frame = 3
Query:  267 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL-------DLGKMDEANDSG 839
            +Y A AK KLP  +F Y   G+  + TL+ N +  + I  R R+L D+S++ + T   G K+++PI ++P  +  M    GE          G   TLS+ S   +EEVA +     +FQLYV KD              G K +  TVD P  G    D+ +  + P     +  QA+       D+G + + +D G
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLG 205          
The following BLAST results are available for this feature:
BLAST of EY660921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
HAOX2_HUMAN5.849e-2437.43Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
LLDD2_MYCTU7.150e-2231.16Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]
MDLB_PSEPU4.634e-2133.33(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
HAOX2_MOUSE7.905e-2134.08Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
LLDD_PSEFS8.180e-1829.56L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_VIBPA2.380e-1730.30L-lactate dehydrogenase [cytochrome] OS=Vibrio par... [more]
LLDD_PSEU21.543e-1630.96L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_XANP22.631e-1630.54L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_VIBCM3.437e-1629.80L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_VIBCH3.437e-1629.80L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-027-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660921 ID=EY660921; Name=EY660921; organism=Citrus sinensis; type=EST; length=896bp
TGCCTCGACCCACGCGTCCGATTTTTTTTTTCGTCTTATAATTCAATCAG
CCCCCTTGTTTTGTCTCCATGAAAACTTATATCTATTTTATTTTCTCTTT
GCTTTCTATTTCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCTACTGGTTTCTCTGAATGCACTTTGCTGCACTGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAATACCACTGACTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAAT
GTGGTTGCTCAGCTTGTGAGAAGGGCTGTAAGAGCCGGATTCAAGGCCGT
TGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCATAGAAACTGACATCA
AGAACAGATTCACTCTACCACCATTATTGACATTAAAGAATTTTCAGGCT
TTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGGCTGCTT
GTTGCTGGTCAAATGATCGTTCTCTGACTTGAAAGACTTGAAGTGC
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