EY660921

Overview
NameEY660921
Unique NameEY660921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SHIBS (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 4 (strain Sb227) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADTHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SHIB3 (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALTY (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALTI (L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISATSDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALSV (L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund (strain CVM19633) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALPK (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A (strain AKU_12601) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALPC (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi C (strain RKS4594) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALPB (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALPA (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
The following BLAST results are available for this feature:
BLAST of EY660921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
LLDD_SHIDS4.963e-1529.89L-lactate dehydrogenase [cytochrome] OS=Shigella d... [more]
LLDD_SHIBS4.963e-1529.89L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_SHIB34.963e-1529.89L-lactate dehydrogenase [cytochrome] OS=Shigella b... [more]
LLDD_SALTY4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALTI4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALSV4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPK4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPC4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPB4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALPA4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-027-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660921 ID=EY660921; Name=EY660921; organism=Citrus sinensis; type=EST; length=896bp
TGCCTCGACCCACGCGTCCGATTTTTTTTTTCGTCTTATAATTCAATCAG
CCCCCTTGTTTTGTCTCCATGAAAACTTATATCTATTTTATTTTCTCTTT
GCTTTCTATTTCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCTACTGGTTTCTCTGAATGCACTTTGCTGCACTGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAATACCACTGACTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAAT
GTGGTTGCTCAGCTTGTGAGAAGGGCTGTAAGAGCCGGATTCAAGGCCGT
TGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCATAGAAACTGACATCA
AGAACAGATTCACTCTACCACCATTATTGACATTAAAGAATTTTCAGGCT
TTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGGCTGCTT
GTTGCTGGTCAAATGATCGTTCTCTGACTTGAAAGACTTGAAGTGC
back to top