EY660921

Overview
NameEY660921
Unique NameEY660921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7606 contig Csv1_Contig7606:1..896. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALHS (L-lactate dehydrogenase [cytochrome] OS=Salmonella heidelberg (strain SL476) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIQRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALG2 (L-lactate dehydrogenase [cytochrome] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALEP (L-lactate dehydrogenase [cytochrome] OS=Salmonella enteritidis PT4 (strain P125109) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALDC (L-lactate dehydrogenase [cytochrome] OS=Salmonella dublin (strain CT_02021853) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALAR (L-lactate dehydrogenase [cytochrome] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTLKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_SALA4 (L-lactate dehydrogenase [cytochrome] OS=Salmonella agona (strain SL483) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 54/184 (29.35%), Postives = 82/184 (44.57%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S++  R R+L ++S + + TT     +SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA T     +FQLYV +D              G   +  TVD P  G    D  +  + P     + +QA+
Sbjct:    3 ISAASDYRAAAQRTLPPFLFHYIDGGAYAEYTLRRNVEDLSQVALRQRVLKNMSDLSLETTLFNETLSMPVALAPVGLCGMYARRGEVQAAAAADAKGIPFTLSTVSVCPIEEVAPTIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSM (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLU (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186
[Close]
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLI (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12) GN=lldD PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 55/184 (29.89%), Postives = 80/184 (43.48%), Query Frame = 3 
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186
The following BLAST results are available for this feature:
BLAST of EY660921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
LLDD_SALHS4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALG24.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALEP4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALDC4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALAR4.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_SALA44.963e-1529.35L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_ECOSM4.963e-1529.89L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOSE4.963e-1529.89L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLU4.963e-1529.89L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLI4.963e-1529.89L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-027-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660921 ID=EY660921; Name=EY660921; organism=Citrus sinensis; type=EST; length=896bp
TGCCTCGACCCACGCGTCCGATTTTTTTTTTCGTCTTATAATTCAATCAG
CCCCCTTGTTTTGTCTCCATGAAAACTTATATCTATTTTATTTTCTCTTT
GCTTTCTATTTCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCTACTGGTTTCTCTGAATGCACTTTGCTGCACTGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAATACCACTGACTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAAT
GTGGTTGCTCAGCTTGTGAGAAGGGCTGTAAGAGCCGGATTCAAGGCCGT
TGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCATAGAAACTGACATCA
AGAACAGATTCACTCTACCACCATTATTGACATTAAAGAATTTTCAGGCT
TTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGGCTGCTT
GTTGCTGGTCAAATGATCGTTCTCTGACTTGAAAGACTTGAAGTGC
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