EY660921

Overview
NameEY660921
Unique NameEY660921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAB (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 57/198 (28.79%), Postives = 86/198 (43.43%), Query Frame = 3
Query:  267 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL-------DLGKMDEANDSG 839
            +Y A A+ KLP  +F Y   GA  ++TL+ N    S I  R R+L ++S++ + T      ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KD              G   +  TVD P  G    D  +  + P     +  QA+       D+G + + +D G
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA8 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain LESB58) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 57/198 (28.79%), Postives = 86/198 (43.43%), Query Frame = 3
Query:  267 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL-------DLGKMDEANDSG 839
            +Y A A+ KLP  +F Y   GA  ++TL+ N    S I  R R+L ++S++ + T      ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KD              G   +  TVD P  G    D  +  + P     +  QA+       D+G + + +D G
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA7 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain PA7) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.106e-14
Identity = 57/198 (28.79%), Postives = 86/198 (43.43%), Query Frame = 3
Query:  267 EYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL-------DLGKMDEANDSG 839
            +Y A A+ KLP  +F Y   GA  ++TL+ N    S I  R R+L ++S++ + T      ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KD              G   +  TVD P  G    D  +  + P     +  QA+       D+G + + +D G
Sbjct:    8 DYRAAAQRKLPPFLFHYIDGGAYAEYTLRRNVEDLSAIALRQRVLKNMSELSLETRLFDETLAMPVALAPVGLTGMYARRGEVQAARAAAAKGVPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKAAGVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_XANCP (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 57/203 (28.08%), Postives = 89/203 (43.84%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL-------DLGKMDEANDSG 839
            I+   +Y A A+ +LP  +F Y   GA  + TL+ N +  + I  R R+L ++S + ++T   G  ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KD              G   +  TVD P  G    D  +  + P     +  QA+       D+G + + +D G
Sbjct:    3 ISAASDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKTAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAMTHPRWAWDVGLLGKPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_XANC8 (L-lactate dehydrogenase [cytochrome] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 57/203 (28.08%), Postives = 89/203 (43.84%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL-------DLGKMDEANDSG 839
            I+   +Y A A+ +LP  +F Y   GA  + TL+ N +  + I  R R+L ++S + ++T   G  ++MP+ +AP  +  M    GE          G   TLS+ S   +EEVA       +FQLYV KD              G   +  TVD P  G    D  +  + P     +  QA+       D+G + + +D G
Sbjct:    3 ISAASDYRAAAEARLPPFLFHYIDGGAYAEHTLRRNVSDLADIALRQRVLRNMSDLSLSTELFGETLAMPVALAPVGLTGMYARRGEVQAARAAAARGIPFTLSTVSVCPIEEVAPAIDRPMWFQLYVLKDRGFMRNALERAKTAGVTTLVFTVDMPTPGARYRDAHSGMSGPNASLRRMLQAMTHPRWAWDVGLLGKPHDLG 205          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECOUT (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain UTI89 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 54/184 (29.35%), Postives = 79/184 (42.93%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL6 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6 GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 54/184 (29.35%), Postives = 79/184 (42.93%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECOL5 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 54/184 (29.35%), Postives = 79/184 (42.93%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECOK1 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O1:K1 / APEC GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 54/184 (29.35%), Postives = 79/184 (42.93%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186          
BLAST of EY660921 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.444e-14
Identity = 54/184 (29.35%), Postives = 79/184 (42.93%), Query Frame = 3
Query:  252 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTDLGFKISMPIMIAPTAMQKMAHPEGEYXXXXXXXXXGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDXXXXXXXXXXXXXXGFKAVALTVDTPRLGRIETDIKNRFTLPPLLTLKNFQAL 803
            I+   +Y A A+  LP  +F Y   GA  ++TL+ N    S +  R RIL ++S + + TT    K+SMP+ + P  +  M    GE          G   TLS+ S   +EEVA       +FQLYV +D              G   +  TVD P  G    D  +  + P     +  QA+
Sbjct:    3 ISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALGPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAV 186          
The following BLAST results are available for this feature:
BLAST of EY660921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
LLDD_PSEAB1.106e-1428.79L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA81.106e-1428.79L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA71.106e-1428.79L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_XANCP1.444e-1428.08L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_XANC81.444e-1428.08L-lactate dehydrogenase [cytochrome] OS=Xanthomona... [more]
LLDD_ECOUT1.444e-1429.35L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL61.444e-1429.35L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOL51.444e-1429.35L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOK11.444e-1429.35L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO811.444e-1429.35L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-027-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660921 ID=EY660921; Name=EY660921; organism=Citrus sinensis; type=EST; length=896bp
TGCCTCGACCCACGCGTCCGATTTTTTTTTTCGTCTTATAATTCAATCAG
CCCCCTTGTTTTGTCTCCATGAAAACTTATATCTATTTTATTTTCTCTTT
GCTTTCTATTTCTTAAATCTCCCTCTATAACTCAGTCTTTGTTCATCATC
GTCTTCTCTCTACTGGTTTCTCTGAATGCACTTTGCTGCACTGTCTTTGT
AAACCTTAGATTAATTTAAGTAGAAAACAGTCAACTGACAAGATGGGAGA
GATCACAAATGTGATGGAGTATGAGGCCATTGCCAAGGAAAAGTTGCCAA
AGATGGTGTTTGATTACTATGCTTCAGGTGCAGAGGACCAGTGGACTTTG
CAAGAGAACAGGAATGCTTTCTCAAGAATCCTGTTTCGACCTCGCATTCT
GATTGATGTAAGCAAAATAGACATGAATACCACTGACTTGGGCTTCAAGA
TATCGATGCCAATCATGATTGCCCCAACAGCCATGCAGAAGATGGCTCAT
CCTGAAGGGGAGTATGCTACAGCTAGAGCTGCATCGGCTGCTGGAACGAT
TATGACATTGTCTTCGTGGTCTACTTCTAGCGTTGAAGAGGTTGCTTCAA
CAGGACCTGGCATCCGCTTTTTCCAGCTCTATGTGTACAAGGACAGGAAT
GTGGTTGCTCAGCTTGTGAGAAGGGCTGTAAGAGCCGGATTCAAGGCCGT
TGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCATAGAAACTGACATCA
AGAACAGATTCACTCTACCACCATTATTGACATTAAAGAATTTTCAGGCT
TTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGGCTGCTT
GTTGCTGGTCAAATGATCGTTCTCTGACTTGAAAGACTTGAAGTGC
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