EY660742

Overview
NameEY660742
Unique NameEY660742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 67.3958 bits (163), Expect = 4.749e-19
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  265 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGA-VTGVKDQGACGSCWSFS 606
            HF  + SK  KTY+T+E H +R + F +N R+       + T    + +FSD++ +E + ++L    +      A K+  L  T   P   DWR  G  V+ VK+QGACGSCW+FS
Sbjct:   34 HFKSWMSKHRKTYSTEEYH-HRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQ---NCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFS 145          

HSP 2 Score: 48.521 bits (114), Expect = 4.749e-19
Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 3
Query:  609 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 764
            TGALE A  ++TG+++SL+EQQLVDC  + +       + GC GGL + AFE
Sbjct:  147 TGALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFE 191          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.643e-19
Identity = 57/126 (45.24%), Postives = 74/126 (58.73%), Query Frame = 1
Query:  235 SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFS 606
            S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR  +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGSCW+FS
Sbjct:  176 SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYL--NTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFS 299          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.763e-18
Identity = 41/119 (34.45%), Postives = 58/119 (48.74%), Query Frame = 1
Query:  268 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR------LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 606
            F  +  K  K Y +  E + R  +F+ NLR    R   + +   G+T F+DL+  E++    G + R          +D  K      + LP   DWR+ GAVT VKDQG C SCW+FS
Sbjct:   49 FESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSA--DDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFS 165          

HSP 2 Score: 48.521 bits (114), Expect = 1.763e-18
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 3
Query:  612 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFESYSKLVG-*TRKDYP 806
            GA+EG + + TGELV+LSEQ L++C+ E         ++GC GG + +A+E   K  G  T  DYP
Sbjct:  168 GAVEGLNKIVTGELVTLSEQDLINCNKE---------NNGCGGGKLETAYEFIMKNGGLGTDNDYP 224          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.763e-18
Identity = 36/113 (31.86%), Postives = 55/113 (48.67%), Query Frame = 1
Query:  268 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 606
            F+ F  ++ K+Y +  E   RFR+F  +L   +           G+ +FSD++  EF+   LG  +       A    +     LP   DWR+ G V+ VK+Q  CGSCW+FS
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATL-AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFS 172          

HSP 2 Score: 52.373 bits (124), Expect = 1.763e-18
Identity = 34/68 (50.00%), Postives = 41/68 (60.29%), Query Frame = 3
Query:  609 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFESYSKLVG--*TRKDYP 806
            TGALE A+  +TG+ +SLSEQQLVDC         G  + GCNGGL + AFE Y K  G   T + YP
Sbjct:  174 TGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFE-YIKYNGGIDTEESYP 233          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.878e-18
Identity = 46/133 (34.59%), Postives = 67/133 (50.38%), Query Frame = 1
Query:  235 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPA---DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAPA 615
            S+D L + E    LF S   K +K Y + +E  YRF +F+ NL         + +   G+  F+DL+  EF+++++G            D +        + P   DWR  GAVT VK+QGACGSCW+FS  A
Sbjct:   34 SQDDLTSIERLIQLFDSWMLKHNKIYESIDEKIYRFEIFRDNLMYIDETNKKNNSYWLGLNGFADLSNDEFKKKYVGFVAEDFTGLEHFDNEDFTYKHVTNYPQSIDWRAKGAVTPVKNQGACGSCWAFSTIA 166          

HSP 2 Score: 37.7354 bits (86), Expect = 3.878e-18
Identity = 22/63 (34.92%), Postives = 31/63 (49.21%), Query Frame = 3
Query:  618 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFESYSKLVG*TRKDYP 806
            +EG + + TG L+ LSEQ+LVDCD             GC GG   ++ +  +     T K YP
Sbjct:  168 VEGINKIVTGNLLELSEQELVDCDKH---------SYGCKGGYQTTSLQYVANNGVHTSKVYP 221          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.883e-18
Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  265 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHG-AVTGVKDQGACGSCWSFS 606
            HF+ +  +  KTY+++E + +R +VF  N R+ +     + T   G+ +FSD++ +E + ++L    +      A K+  L  T   P+  DWR  G  V+ VK+QGACGSCW+FS
Sbjct:   32 HFTSWMKQHQKTYSSRE-YSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQ---NCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFS 143          

HSP 2 Score: 45.0542 bits (105), Expect = 3.883e-18
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 3
Query:  609 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 764
            TGALE A  +++G++++L+EQQLVDC    +       + GC GGL + AFE
Sbjct:  145 TGALESAVAIASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFE 189          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.045e-18
Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 1
Query:  235 SEDHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSA 609
            S++ L + E    LF+S   K +K Y   +E  YRF +FK NL+        + +   G+  F+D++  EF+ ++ G         +     +L   D  +P   DWR  GAVT VK+QG+CGSCW+FSA
Sbjct:   34 SQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSA 163          

HSP 2 Score: 34.2686 bits (77), Expect = 5.045e-18
Identity = 22/63 (34.92%), Postives = 29/63 (46.03%), Query Frame = 3
Query:  618 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFESYSKLVG*TRKDYP 806
            +EG   + TG L   SEQ+L+DCD             GCNGG   SA +  ++     R  YP
Sbjct:  167 IEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQYGIHYRNTYP 220          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 5.048e-18
Identity = 38/109 (34.86%), Postives = 55/109 (50.46%), Query Frame = 1
Query:  292 SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN----DLPTDFDWRDHGAVTGVKDQGACGSCWSFS 606
            +K Y T +E   R+  FK N+             V G+ + +DL+  E+R  +LG    ++L    ++   L  N      P + DWR+  AVT VKDQG CGSC+SFS
Sbjct:   42 NKAY-THKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFS 149          

HSP 2 Score: 51.6026 bits (122), Expect = 5.048e-18
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 3
Query:  609 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 764
            TG++EG   + TG+LVSLSEQ ++DC        S   + GCNGGLM +AFE
Sbjct:  151 TGSVEGVTAIKTGKLVSLSEQNILDC-------SSSFGNEGCNGGLMTNAFE 195          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.110e-17
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  265 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGA-VTGVKDQGACGSCWSFS 606
            HF  +  +  K Y++ EE+ +R + F +NLR        + T   G+ +FSD++  E +R++L    +      A K+  L  T   P   DWR  G  VT VK+QG+CGSCW+FS
Sbjct:   34 HFQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSEPQ---NCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFS 145          

HSP 2 Score: 45.0542 bits (105), Expect = 1.110e-17
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 3
Query:  609 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 764
            TGALE A  ++TG+L  L+EQQLVDC    +       + GC GGL + AFE
Sbjct:  147 TGALESAVAIATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFE 191          
BLAST of EY660742 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 1.440e-17
Identity = 42/116 (36.21%), Postives = 58/116 (50.00%), Query Frame = 1
Query:  268 FSLFKSKFSKTYATQEEHDYRFRVFKANL---RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 606
            F+ F  +  K Y    E   RFR+F  +L   R   RR L  P  + G+ +F+D++  EF+   LG  +       A    +     LP   DWR+ G V+ VKDQG CGSCW+FS
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGL--PYRL-GINRFADMSWEEFQASRLGAAQNCSATL-AGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFS 173          

HSP 2 Score: 47.3654 bits (111), Expect = 1.440e-17
Identity = 33/71 (46.48%), Postives = 42/71 (59.15%), Query Frame = 3
Query:  609 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFESYSKLVG--*TRKDYP*LG 815
            TG+LE A+  +TG+ VSLSEQQLVDC        +   + GC+GGL + AFE Y K  G   T + YP  G
Sbjct:  175 TGSLEAAYTQATGKPVSLSEQQLVDC-------ATAYNNFGCSGGLPSQAFE-YIKYNGGLDTEEAYPYTG 237          
The following BLAST results are available for this feature:
BLAST of EY660742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
CATH_HUMAN4.749e-1936.21Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATF_HUMAN7.643e-1945.24Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CPR3_ARATH1.763e-1834.45Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ALEU_HORVU1.763e-1831.86Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
PAPA2_CARPA3.878e-1834.59Chymopapain OS=Carica papaya PE=1 SV=2[more]
CATH_RAT3.883e-1834.48Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
PAPA1_CARPA5.045e-1834.62Papain OS=Carica papaya PE=1 SV=1[more]
CYSP3_DICDI5.048e-1834.86Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CATH_BOVIN1.110e-1735.34Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
ORYC_ORYSJ1.440e-1736.21Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-025-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660742 ID=EY660742; Name=EY660742; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGAAATCTCATAAGCGGACCCAACCACAAGTTTCTTCTGTC
TTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTGAA
ACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCCTC
CTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCTAT
GATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCTCC
TGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACT
TACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAA
CCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACG
GTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTC
CTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCTCC
TATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACG
GCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCG
TTTAGTGCACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAG
CTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGA
TCCAGAAGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGA
ACTCTGCCTTTGAGTCATACTCAAAGCTGGTGGGGTGAACCAGAAAAGAC
TACCCTTAACTGGGACCGACAGTGGTTCTGCAAATTGACAAAACAAAATG
CTGCACTGNATCTAATTCAGGGTTATTCCTCTGATGAGATCAATGGCTGC
AAATTGGTGAAAC
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