EY660737
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660737 vs. ExPASy Swiss-Prot
Match: LDH_CLOPE (L-lactate dehydrogenase OS=Clostridium perfringens GN=ldh PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11 Identity = 53/177 (29.94%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 149 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGSH 673 K++I+GA G +G A + + L S + + D+ N A+ + GA + + A T D+VII AGV KPG TR D+ N N I +++ + K PN+I+ ++SNPV+ I + K + ++++G T+LD R ++E +D R+V ++G H Sbjct: 8 KISIIGA-GFVGSTTAFALMQDGLASEIVIVDI-NKDKAHAEAMDLAQGAAFVKSVDIKSGDYADTKDSDIVIITAGVGPKPGETRLDIINKNLKIFQSIVPEVVKYSPNSILLVVSNPVD----ILTYITYKLSGFPKERVIGSGTVLDTSRLKYMLSEHFDIDARNVHTYIIGEH 178
BLAST of EY660737 vs. ExPASy Swiss-Prot
Match: LDH_CLOP1 (L-lactate dehydrogenase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=ldh PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11 Identity = 53/177 (29.94%), Postives = 90/177 (50.85%), Query Frame = 2 Query: 149 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGSH 673 K++I+GA G +G A + + L S + + D+ N A+ + GA + + A T D+VII AGV KPG TR D+ N N I +++ + K PN+I+ ++SNPV+ I + K + ++++G T+LD R ++E +D R+V ++G H Sbjct: 8 KISIIGA-GFVGSTTAFALMQDGLASEIVIVDI-NKDKAHAEAMDLAQGAAFVKSVDIKSGDYADTKDSDIVIITAGVGPKPGETRLDIINKNLKIFQSIVPEVVKYSPNSILLVVSNPVD----ILTYITYKLSGFPKERVIGSGTVLDTSRLKYMLSEHFDIDARNVHTYIIGEH 178
BLAST of EY660737 vs. ExPASy Swiss-Prot
Match: MDH_PROVI (Malate dehydrogenase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=mdh PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11 Identity = 47/178 (26.40%), Postives = 88/178 (49.44%), Query Frame = 2 Query: 149 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPVVGSH 673 K+ ++GA G +G A+ + L + L D++ G D+ A+ + D+V+I AG+ RKPGM+R+DL N I++ + + + N I+ ++SNP++ +A V P++++G+ +LD R +F+AE L + +D++ V+G H Sbjct: 2 KITVIGA-GHVGATAALRIAEKQLAREVVLIDIIEGIPQGKALDMYESGPVALFDTMVKGSNDYADSADSDIVLITAGLARKPGMSREDLLMKNTAIIKDVTTQVMRYSVNPILIMVSNPLDVMTFVAHTV----SGLKPERVIGMAGVLDTARFRSFIAEALNVSMQDINAFVLGGH 174
BLAST of EY660737 vs. ExPASy Swiss-Prot
Match: LDH_SYNJB (L-lactate dehydrogenase OS=Synechococcus sp. GN=ldh PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11 Identity = 53/181 (29.28%), Postives = 86/181 (47.51%), Query Frame = 2 Query: 149 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISH----MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGSH 673 K +I+GA G +G A M I + L L+D+ G D+ H ++ + G L G D+VI+ AG ++PG TR DL N I + L + CP+ ++ ++SNPV+ ++ K +G + + T+LD R +AE LG+DPR + ++G H Sbjct: 2 KGSIIGA-GQVGMACAYSMVIQNTLDELVLHDIDRNKLEGEVMDLVHGIPFVEPTRIRAGELAD------CAGSDVVILTAGAKQRPGETRLDLVQRNVEIFKGLIPALMAHCPDTLLLVVSNPVDIMTYVS---LKLSGLPAGQVIGSGTVLDTARFRYLLAERLGVDPRSLHAYIIGEH 172
BLAST of EY660737 vs. ExPASy Swiss-Prot
Match: MDH_PSEPK (Probable malate dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=mdh PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11 Identity = 39/111 (35.14%), Postives = 57/111 (51.35%), Query Frame = 2 Query: 341 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGSH 673 L G +LV+I AGVPRKPG +R D+ + N I+ ++ I P A V ++SNPV+ + + +G K +LD R F+AE G RD+ V+G H Sbjct: 37 LEGSELVVITAGVPRKPGQSRQDVLSTNLPILDSIMADIKHHAPTATVLVVSNPVD---VLTYRAWSVSGQGRDKVFGQAGVLDTARMKCFIAEQTGFSARDITALVLGGH 144
BLAST of EY660737 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11 Identity = 52/198 (26.26%), Postives = 93/198 (46.97%), Query Frame = 2 Query: 149 KVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVNTPGVTADISHMDTGAV------VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI-AKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV-GSHAGVQFCHFYH 703 +V + GAAG IG L ++ ++ +LH+ D+ P T ++ + V ++G + + A TG+++ ++ G PRK GM R D+ + N I ++ + A PN V +++NP N+ I E A + K + +T LD RA ++E L + DV ++ G+H+ Q+ H Sbjct: 7 RVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDI---PPATESLNGLKMELVDAAFPLLKGIVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPNCKVLVVANPANTNALILKEF---APSIPEKNITCLTRLDHNRALGQISEKLNVQVTDVKNAIIWGNHSSTQYPDVNH 198 The following BLAST results are available for this feature:
BLAST of EY660737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 386
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660737 ID=EY660737; Name=EY660737; organism=Citrus sinensis; type=EST; length=895bpback to top |