EY660479

Overview
NameEY660479
Unique NameEY660479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: PRP4B_RAT (Serine/threonine-protein kinase PRP4 homolog OS=Rattus norvegicus GN=Prpf4b PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14
Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 2
Query:   11 TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW----PEGAVSRESIKAVKKLDRLKNMVS-------LHVDRARST--LTDLLHGLLRYDPSERLTARQALNHPFFR 439
            +R YRAPE+I+G  + Y  DMWSVGC L EL TG+ LF    N   L +     G +P  MIR   +G  K       LN+     +    RE +  +  ++  K++++       L  D+ +    L DLL  +L  DP++R++  QAL H F +
Sbjct:  852 SRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIR---KGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQ 1004          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: PRP4B_MOUSE (Serine/threonine-protein kinase PRP4 homolog OS=Mus musculus GN=Prpf4b PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14
Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 2
Query:   11 TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW----PEGAVSRESIKAVKKLDRLKNMVS-------LHVDRARST--LTDLLHGLLRYDPSERLTARQALNHPFFR 439
            +R YRAPE+I+G  + Y  DMWSVGC L EL TG+ LF    N   L +     G +P  MIR   +G  K       LN+     +    RE +  +  ++  K++++       L  D+ +    L DLL  +L  DP++R++  QAL H F +
Sbjct:  852 SRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIR---KGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQ 1004          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: PRP4B_HUMAN (Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14
Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 2
Query:   11 TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW----PEGAVSRESIKAVKKLDRLKNMVS-------LHVDRARST--LTDLLHGLLRYDPSERLTARQALNHPFFR 439
            +R YRAPE+I+G  + Y  DMWSVGC L EL TG+ LF    N   L +     G +P  MIR   +G  K       LN+     +    RE +  +  ++  K++++       L  D+ +    L DLL  +L  DP++R++  QAL H F +
Sbjct:  852 SRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIR---KGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQ 1004          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: PRP4B_BOVIN (Serine/threonine-protein kinase PRP4 homolog OS=Bos taurus GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.051e-14
Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 2
Query:   11 TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW----PEGAVSRESIKAVKKLDRLKNMVS-------LHVDRARST--LTDLLHGLLRYDPSERLTARQALNHPFFR 439
            +R YRAPE+I+G  + Y  DMWSVGC L EL TG+ LF    N   L +     G +P  MIR   +G  K       LN+     +    RE +  +  ++  K++++       L  D+ +    L DLL  +L  DP++R++  QAL H F +
Sbjct:  853 SRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIR---KGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQ 1005          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: PRP4B_PONAB (Serine/threonine-protein kinase PRP4 homolog OS=Pongo abelii GN=PRPF4B PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14
Identity = 52/156 (33.33%), Postives = 78/156 (50.00%), Query Frame = 2
Query:   11 TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW----PEGAVSRESIKAVKKLDRLKNMVS-------LHVDRARST--LTDLLHGLLRYDPSERLTARQALNHPFFR 439
            +R YRAPE+I+G  + Y  DMWSVGC L EL TG+ LF    N   L +     G +P  MIR   +G  K       LN+     +    RE +  +  ++  K++++       L  D+ +    L DLL  +L  DP++R++  QAL H F +
Sbjct:  852 SRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIR---KGVFKDQHFDPNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQ 1004          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.498e-14
Identity = 48/147 (32.65%), Postives = 75/147 (51.02%), Query Frame = 2
Query:    5 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP----EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 433
            + +R YR+PEVILG+G+  P D+WS+GCI+ E+ TG  LF      E LA +    GP    +I + SR  +K F   S    P    +G   R   K++ ++ + K++          +    +   L++DP ER+T +QA  H F
Sbjct:  860 IQSRFYRSPEVILGMGYGTPIDVWSLGCIIAEMYTGFPLFPGENEQEQLACIMEIFGPPDHSLIDKCSR--KKVFFDSSGKPRPFVSSKGVSRRPFSKSLHQVLQCKDV----------SFLSFISDCLKWDPDERMTPQQAAQHDF 994          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.967e-14
Identity = 49/158 (31.01%), Postives = 75/158 (47.47%), Query Frame = 2
Query:    5 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE------NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLN------WPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 442
            + TR YR+PEV+LG  W    D+WS  C++ EL TG+ LF+  E      + +H+A +   LG LP +++R        +  RG   N      WP   V  E  K  K             D A+  ++D L  +L+ DP +R  A   +NHP+ ++
Sbjct:  565 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK-------------DEAKE-ISDFLSPMLQLDPRKRADAGGLVNHPWLKD 708          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: MBK2_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis elegans GN=mbk-2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 53/161 (32.92%), Postives = 74/161 (45.96%), Query Frame = 2
Query:    5 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRG-----TEKYFRRGSRLNWPEGAVSRESIKAVKKLDR-----------LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 439
            + +R YRAPEVILG  +  P DMWS+GCIL EL TG  L    +  + LA++   LG  P   +  A R      ++ Y R  +  + P+G+V     ++ +   R           LKNM             D L   L +DP  R+T  QAL H + R
Sbjct:  622 IQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFITSKGYPRYCTATSMPDGSVVLAGARSKRGKMRGPPASRSWSTALKNM-------GDELFVDFLKRCLDWDPETRMTPAQALKHKWLR 775          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: MBK2_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 OS=Caenorhabditis briggsae GN=mbk-2 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 49/154 (31.82%), Postives = 74/154 (48.05%), Query Frame = 2
Query:    5 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRG-----TEKYFRRGSRLNWPEGAV----SRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 439
            + +R YRAPEVILG  +  P DMWS+GCIL EL TG  L    +  + LA++   LG  P   +  A R      ++ Y R  +  + P+G+V    +R     ++     ++  +   +       D L   L +DP  R+T  QAL H + R
Sbjct:  621 IQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFITSKGYPRYCTATSMPDGSVVLAGARSKRGKMRGPPESRSWSTALKNMGDELFVDFLKRCLDWDPETRMTPAQALKHKWLR 774          
BLAST of EY660479 vs. ExPASy Swiss-Prot
Match: DYRK1_DICDI (Probable serine/threonine-protein kinase dyrk1 OS=Dictyostelium discoideum GN=dyrk1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.793e-14
Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 2
Query:    5 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR---GSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS--------------TLTDLLHGLLRYDPSERLTARQALNHPFF 436
            + +R YR+PE++L L +S+  DMWS+GCILVE+  GE LF      + L  +   L   P HMI  +S   +K+F +    S     +    + +++  KK  +L  ++ +     +S                 DL+  +L YDP +R+T  +AL H FF
Sbjct:  467 IQSRFYRSPEILLELEYSFSIDMWSLGCILVEMHVGEPLFSGQNEQDQLTKIIEVLDLPPSHMI-DSSPKAKKFFTKDPINSTYQLKKNEKLKTNVEFCKK--KLSEIIGVETGGPQSRRKNEPGHALVDYLKFLDLIEKMLIYDPQKRITPLEALQHSFF 624          
The following BLAST results are available for this feature:
BLAST of EY660479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
PRP4B_RAT2.051e-1433.33Serine/threonine-protein kinase PRP4 homolog OS=Ra... [more]
PRP4B_MOUSE2.051e-1433.33Serine/threonine-protein kinase PRP4 homolog OS=Mu... [more]
PRP4B_HUMAN2.051e-1433.33Serine/threonine-protein kinase PRP4 homolog OS=Ho... [more]
PRP4B_BOVIN2.051e-1433.33Serine/threonine-protein kinase PRP4 homolog OS=Bo... [more]
PRP4B_PONAB2.678e-1433.33Serine/threonine-protein kinase PRP4 homolog OS=Po... [more]
POM1_SCHPO3.498e-1432.65Dual specificity protein kinase pom1 OS=Schizosacc... [more]
SKY1_YEAST5.967e-1431.01Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
MBK2_CAEEL7.793e-1432.92Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK2_CAEBR7.793e-1431.82Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK1_DICDI7.793e-1430.43Probable serine/threonine-protein kinase dyrk1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-022-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660479 ID=EY660479; Name=EY660479; organism=Citrus sinensis; type=EST; length=595bp
CATTGTTTCCACAAGACATTACAGAGCCCCTGAGGTTATTCTAGGGCTTG
GTTGGTCTTACCCATGTGATATGTGGAGTGTTGGTTGTATATTAGTCGAG
CTATGCACGGGTGAAGCGTTATTCCAAACACATGAGAACTTGGAGCATTT
GGCGATGATGGAGAGGGCGTTGGGTCCTCTGCCAGAGCATATGATTCGAA
GGGCCAGCCGAGGAACCGAAAAATATTTCAGGAGAGGATCAAGACTAAAT
TGGCCTGAGGGGGCAGTTTCTAGGGAGAGTATTAAAGCCGTGAAGAAGCT
AGATCGTCTGAAGAATATGGTATCGCTTCATGTAGACAGAGCAAGGTCTA
CTCTCACCGATTTGTTGCATGGTTTGTTGAGATATGATCCATCCGAACGT
CTCACTGCTCGGCAAGCTCTCAATCACCCCTTCTTTAGAAATCTAAATGA
ATAAAAGCTGGTAAGCAATGTTCGGTTAGTTGTAATGGTTGTTTATACGA
AATGTAAGTCTCAGACTGAGTTTCCCATTTACTTGTAATCTGTGCATAAA
TGTTAACTTAATGAAAATGTTTTGTTGTCTTTTAAAAAAAANNNN
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