EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PROMP (Translation initiation factor IF-2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=infB PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 8.945e-52 Identity = 98/202 (48.51%), Postives = 139/202 (68.81%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ +L+ LP++ V ++ LL A G+I+ +D+DLA AS ++I+GFN K AD V+IR Y VIY L++D+++AMEGLLE + +G AEVRA F+ G G +AGC + GKL + C +RV+R K + G LDSL+R K++VKEVN G ECGVG + W EGDII AF + +KRT Sbjct: 965 LKELNLILKADVQGSVEAILGSLEQLPKNEVQVRVLLSAPGEITETDIDLAAASGSVIIGFNTSLASGAKRAADANDVDIREYEVIYKLLEDIQSAMEGLLEPDLVEESLGQAEVRATFAVGKGAIAGCYIQSGKLQRNCSLRVLRSDKVIFEGNLDSLKRSKDDVKEVNTGFECGVGCDKFSTWSEGDIISAFKFVTKKRT 1166
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PROM0 (Translation initiation factor IF-2 OS=Prochlorococcus marinus (strain MIT 9301) GN=infB PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.168e-51 Identity = 99/202 (49.01%), Postives = 138/202 (68.32%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ +L+ LP++ V ++ L A G+I+ +D+DLA AS ++I+GFN K AD V+IR Y VIY L++D++ AMEGLLE + +G AEVRA FS G G +AGC + GKL + C +RVIR K + G LDSL+R K++VKEVN G ECGVG + W EGD+IEAF + +KRT Sbjct: 910 LKELNLILKADVQGSVEAILGSLEQLPKNEVQVRVLFSAPGEITETDIDLAAASGSVIIGFNTSLASGAKRAADANDVDIREYEVIYKLLEDIQLAMEGLLEPDLVEESLGQAEVRATFSVGKGAIAGCYIQTGKLQRNCSLRVIRSEKVIFEGNLDSLKRAKDDVKEVNTGFECGVGCDKFSSWIEGDVIEAFKFVTKKRT 1111
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_SYNS9 (Translation initiation factor IF-2 OS=Synechococcus sp. (strain CC9902) GN=infB PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 7.572e-51 Identity = 102/201 (50.75%), Postives = 141/201 (70.15%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+I+ +DVDLA AS A+I+GFN K AD GV++R Y VIY L++D++ AMEGLLE + +G AEVRA+F+ G VAGC V+ GKL + C +RV R + V+ G LDSLRR K++VKEV G ECGVGA + +WEEGD IEAF + ++R Sbjct: 972 LKELNLILKADVQGSVEAILGSLEQLPKDEVQVRVLLSAPGEITETDVDLAAASGAVIIGFNTSMASGAKKAADATGVDVRDYDVIYKLLEDIQLAMEGLLEPELIEEALGEAEVRAVFTIGKSAVAGCYVNTGKLHRNCRVRVHRGKQVVYTGDLDSLRRNKDDVKEVATGFECGVGADRFANWEEGDRIEAFKMVTQRR 1172
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_SYNSC (Translation initiation factor IF-2 OS=Synechococcus sp. (strain CC9605) GN=infB PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.877e-50 Identity = 101/201 (50.25%), Postives = 140/201 (69.65%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+I+ +DVDLA AS A+I+GFN K AD GV++R Y VIY L++D++ AMEGLLE + +G AEVRA+F+ G VAGC V+ GKL + C +RV R + V+ G LDSLRR K++VKEV G ECGVG + +WEEGD IEAF + ++R Sbjct: 900 LKELNLILKADVQGSVEAILGSLEQLPKDEVQVRVLLSAPGEITETDVDLAAASGAVIVGFNTSMASGAKKAADATGVDVRDYDVIYKLLEDIQMAMEGLLEPELVEEALGEAEVRAVFTIGKSAVAGCYVTTGKLHRNCRVRVHRGKQVVYEGDLDSLRRNKDDVKEVATGFECGVGTDRFANWEEGDRIEAFKMVTQRR 1100
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_SYNPX (Translation initiation factor IF-2 OS=Synechococcus sp. (strain WH8102) GN=infB PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 6.410e-50 Identity = 99/201 (49.25%), Postives = 140/201 (69.65%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+++ +DVDLA AS A+I+GFN K AD GV++R Y VIY L++D++ AMEGLLE + +G AEVRA+F+ G VAGC V+ GKL + C +RV R + V+ G LDSLRR K++VKEV G ECGVG + +WE+GD IEAF + ++R Sbjct: 446 LKELNLILKADVQGSVEAILGSLEQLPKDEVQVRVLLSAPGEVTETDVDLAAASGAVIVGFNTSMASGAKKAADATGVDVRDYDVIYKLLEDIQLAMEGLLEPELVEEALGEAEVRAVFTIGKSAVAGCYVTTGKLQRNCKVRVHRGSQVVYDGDLDSLRRNKDDVKEVATGFECGVGTDRFANWEDGDRIEAFKMVTQRR 646
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_SYNR3 (Translation initiation factor IF-2 OS=Synechococcus sp. (strain RCC307) GN=infB PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 8.372e-50 Identity = 98/202 (48.51%), Postives = 138/202 (68.32%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ L+ LPQ V ++ LL A G+++ +DVDLA AS A+I+GFN + A+ GV++R Y VIY L++D++ AMEGLLE + P+G AEVRA+FS G VAGC V+ G + + C IRV R + V G LDSL+R+K +VKEVN G ECG G + DW+EGD +EAF + ++RT Sbjct: 902 LKELNLILKADVQGSVEAILGMLEQLPQGEVQVRVLLSAPGEVTETDVDLAAASGAVIVGFNTTLASGARRAAELAGVDVRDYNVIYKLLEDIQAAMEGLLEPELVESPLGEAEVRAVFSIGKSAVAGCYVTSGSIQRNCKIRVHRGKQLVFSGDLDSLKRMKNDVKEVNTGFECGFGCDRFADWQEGDRVEAFAMVTQRRT 1103
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PROM4 (Translation initiation factor IF-2 OS=Prochlorococcus marinus (strain MIT 9211) GN=infB PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.093e-49 Identity = 98/202 (48.51%), Postives = 139/202 (68.81%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGSIEA+ +L+ LP+D V ++ LL A G+++ +DVDLA AS A+I+GFN K AD V++R Y VIY L++D++ AMEGLLE + +G AEVRAIFS G VAGC ++ GKL + C +RV R + V G LDSLRR K+ VK+V +G ECGVG + +W+EGDII+ + + ++RT Sbjct: 909 LKELNIILKADVQGSIEAILGSLEQLPKDEVQVRVLLSAPGEVTETDVDLAAASGAVIVGFNTSMASGAKKAADANSVDVRDYEVIYKLLEDIQLAMEGLLEPDMVEESLGEAEVRAIFSIGKSAVAGCYITNGKLQRNCKVRVKRGSQIVFEGDLDSLRRNKDVVKDVGSGFECGVGCDRFANWKEGDIIQGYKLVTKRRT 1110
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_SYNPW (Translation initiation factor IF-2 OS=Synechococcus sp. (strain WH7803) GN=infB PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.865e-49 Identity = 98/201 (48.76%), Postives = 140/201 (69.65%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+I+ +DVDLA AS A+I+GFN + AD GV++R Y VIY L++D++ AMEGLLE + +G AEVRA+F+ G VAGC V+ GKL + C +RV R + V+ G LDSLRR K++VKEV G ECGVG + +W++GD IEAF + ++R Sbjct: 919 LKELNLILKADVQGSVEAILGSLEQLPKDEVQVRVLLSAPGEITETDVDLAAASGAVIVGFNTSMASGARKAADANGVDVRDYDVIYKLLEDIQLAMEGLLEPELVEEALGEAEVRAVFTIGKSAVAGCYVTTGKLQRNCKVRVHRGKEIVYAGDLDSLRRNKDDVKEVATGFECGVGTDRFANWQDGDRIEAFKMVTQRR 1119
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PROMT (Translation initiation factor IF-2 OS=Prochlorococcus marinus (strain NATL2A) GN=infB PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.436e-49 Identity = 98/201 (48.76%), Postives = 139/201 (69.15%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+I+ +D+DLA AS A+I+GFN K AD GV++R Y VIY L++D++ AMEGLLE + +G AEVRAIFS G VAGC V+ GK+ + C RV R + V G LDSL+R K++VK+V+ G ECG+G + +WEEGD IEAF + ++R Sbjct: 979 LKELNIILKADVQGSLEAILGSLEQLPKDEVQVRVLLSAPGEITETDIDLAAASGAVIVGFNTSMASGAKRAADANGVDVREYEVIYKLLEDIQLAMEGLLEPEMIEEALGVAEVRAIFSIGKSAVAGCYVTNGKIQRNCRARVKRGKQIVFEGDLDSLKRNKDDVKDVSTGFECGIGCDRFANWEEGDQIEAFKLVTQRR 1179
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PROMM (Translation initiation factor IF-2 OS=Prochlorococcus marinus (strain MIT 9313) GN=infB PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.436e-49 Identity = 99/202 (49.01%), Postives = 139/202 (68.81%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+I+ +DVDLA AS A+I+GFN K AD GV++R Y VIY L++D++ AMEGLLE + +G AEVRA+F+ G VAGC ++ GKL + C +RV R + V G LDSLRR K++VKEV G ECG+G + +WEE DIIEA + ++RT Sbjct: 920 LKELNLILKADVQGSVEAILGSLEQLPKDEVQVRVLLSAPGEITETDVDLAAASGAVIVGFNTSMASGAKRAADATGVDVRDYDVIYKLLEDIQMAMEGLLEPELVEESLGEAEVRAVFTIGKSAVAGCYITAGKLQRNCRVRVRRAKQVVFEGDLDSLRRNKDDVKEVATGFECGIGCDRFANWEERDIIEAHKLVTKRRT 1121 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |