EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PROM3 (Translation initiation factor IF-2 OS=Prochlorococcus marinus (strain MIT 9303) GN=infB PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.436e-49 Identity = 99/202 (49.01%), Postives = 139/202 (68.81%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+I+ +DVDLA AS A+I+GFN K AD GV++R Y VIY L++D++ AMEGLLE + +G AEVRA+F+ G VAGC ++ GKL + C +RV R + V G LDSLRR K++VKEV G ECG+G + +WEE DIIEA + ++RT Sbjct: 919 LKELNLILKADVQGSVEAILGSLEQLPKDEVQVRVLLSAPGEITETDVDLAAASGAVIVGFNTSMASGAKRAADATGVDVRDYDVIYKLLEDIQMAMEGLLEPELVEESLGEAEVRAVFTIGKSAVAGCYITTGKLQRNCRVRVRRAKQVVFEGDLDSLRRNKDDVKEVATGFECGIGCDRFANWEERDIIEAHKLVTKRRT 1120
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PROM1 (Translation initiation factor IF-2 OS=Prochlorococcus marinus (strain NATL1A) GN=infB PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 9.256e-49 Identity = 97/201 (48.26%), Postives = 138/201 (68.66%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K D QGS+EA+ +L+ LP+D V ++ LL A G+I+ +D+DLA AS A+I+GFN K AD GV++R Y VIY L++D++ AMEGLLE + +G AEVRAIFS G VAGC V+ GK+ + C RV R + V G LDSL+R K++VK+V+ G ECG+G + +WEEGD IEAF + ++R Sbjct: 979 LKELNIILKADAQGSLEAILGSLEQLPKDEVQVRVLLSAPGEITETDIDLAAASGAVIVGFNTSMASGAKRAADANGVDVRDYEVIYKLLEDIQLAMEGLLEPEMIEEALGVAEVRAIFSIGKSAVAGCYVTNGKIQRNCRARVKRGKQIVFEGDLDSLKRNKDDVKDVSTGFECGIGCDRFANWEEGDQIEAFKLVTQRR 1179
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PROMA (Translation initiation factor IF-2 OS=Prochlorococcus marinus GN=infB PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.594e-48 Identity = 96/201 (47.76%), Postives = 138/201 (68.66%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+I+ +DVDLA AS A+I+GFN K AD V++R Y VIY L++D++ AMEGLLE + IG AEVRAIF+ G VAGC ++ GKL + C +RV R + V G LDSLRR K+ VK+V++G ECG+G + +W+EGD IE + + ++R Sbjct: 930 LKELNLILKADVQGSVEAILGSLEQLPKDEVQVRVLLSAPGEITETDVDLAAASGAVIIGFNTSMASGAKKAADANSVDVRDYEVIYKLLEDIQLAMEGLLEPDLVEEKIGEAEVRAIFTIGKSAVAGCYITNGKLQRNCKVRVKRADQIVFNGDLDSLRRNKDVVKDVSSGFECGIGCDRFANWKEGDTIEGYKLVTQRR 1130
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_SYNS3 (Translation initiation factor IF-2 OS=Synechococcus sp. (strain CC9311) GN=infB PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 7.836e-48 Identity = 93/201 (46.27%), Postives = 138/201 (68.66%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGS+EA+ +L+ LP+D V ++ LL A G+++ +DVDLA AS A+I+GFN K AD V++R Y VIY L++D++ AMEGLLE + +G AEVRA+F+ G VAGC V+ GKL + C +RV R + V G LDSLRR K++VK+V G ECG+G + +W++GDI+E + + ++R Sbjct: 925 LKELNLILKADVQGSVEAILGSLEQLPKDEVQVRVLLSAPGEVTETDVDLAAASGAVIVGFNTSMASGAKRAADANSVDVRDYDVIYKLLEDIQLAMEGLLEPELVEESLGEAEVRAVFTIGKSAVAGCYVTTGKLQRNCKVRVRRGKEIVFAGDLDSLRRNKDDVKDVATGFECGIGCDRFANWKDGDIVEGYKLVTQRR 1125
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PELTS (Translation initiation factor IF-2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=infB PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.280e-47 Identity = 100/206 (48.54%), Postives = 144/206 (69.90%), Query Frame = 1 Query: 4 RVRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQRKRT 612 ++++L +I+K DVQGS+EA+RQAL+ L D V + + G I+ +DV LA AS AII+GFNV+ + + A+N+ V++RLYRVIYD I+D++ AM GLLE +V +G AE+R IF SS G +AGC V EGK+ + +RVIRDG VH G L+SL+R K++V+EV G ECG+ +++ +EGDIIEAF +I+R+ T Sbjct: 768 QIKELGIIIKADVQGSVEALRQALERLSTDEVRVNIIHGGVGAITETDVMLASASNAIIIGFNVRPDVNARKAAENEKVDVRLYRVIYDAIEDVKAAMSGLLEPEYREVTLGRAEIRKIFRSSKIGNIAGCYVLEGKIERDASVRVIRDGIVVHEGKLESLKRFKDDVREVVQGYECGIALEKFNEIQEGDIIEAFTVEAIKRQLT 973
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_GLOVI (Translation initiation factor IF-2 OS=Gloeobacter violaceus GN=infB PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.280e-47 Identity = 93/202 (46.04%), Postives = 136/202 (67.33%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++L +I++ DVQGS+EA+R +L+ LPQD V L+ L A G++S +D+DLA AS A+IL F+ + A+ GV++R Y VIY L++D++ AMEGLL+ + +G AEVR +F G G+VAGC V EGKL++ +RV R + V G +DSL+R KE+ KEV G ECGVG+ + W+ GD+IE F + +KRT Sbjct: 722 LKELALIIRADVQGSVEAIRASLEKLPQDKVQLRVLQAAAGEVSETDIDLAAASNAVILSFSTTLASGARQAAEQAGVDVREYDVIYKLLEDIQLAMEGLLDPELVEEALGGAEVRQVFPVGKGQVAGCYVKEGKLLRNAQMRVRRGKEVVFEGHVDSLKRFKEDAKEVATGFECGVGSDKFASWQPGDLIECFRMVTQKRT 923
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_THETN (Translation initiation factor IF-2 OS=Thermoanaerobacter tengcongensis GN=infB PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.978e-47 Identity = 93/195 (47.69%), Postives = 140/195 (71.79%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF 588 V++LNVI+K DVQGS+EA+R++L+ L + V ++ + A G I+ +DV LA AS AII+GFNV+ + K A+ + VEI+LYR+IYD I+D++ AM+G+LE ++V +G AEVRA+F G G VAGC V GK+ + +R++RDG ++ G + SL+R K++V+EV G ECG+G ++D +EGDIIEA+ Sbjct: 506 VKELNVIIKADVQGSVEALRKSLEELSNEEVRIRVIHGAVGAITETDVMLASASNAIIIGFNVRPETNAKALAEKEKVEIKLYRIIYDAIEDVKAAMKGMLEPKYKEVELGRAEVRAVFKIPGVGNVAGCYVLNGKIARNADVRIVRDGIVIYEGKIASLKRFKDDVREVQQGFECGIGIEKFNDIKEGDIIEAY 700
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_MOOTA (Translation initiation factor IF-2 OS=Moorella thermoacetica (strain ATCC 39073) GN=infB PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.978e-47 Identity = 104/203 (51.23%), Postives = 141/203 (69.46%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQRK 606 V++LN+++K DVQGS+EA+R AL+ L V + L G I+ +DV LA ASKAII+GFNV+ +V+ A+ GVEIRLYRVIY++IDD++ AM GLLE E +V +G AEVRA F +G VAGC V+EGK+ RVIRDG V G ++SL+R K++V+EV G ECGVG ++D +EGD+IEA+ IQR+ Sbjct: 700 VKELNLVIKGDVQGSVEALRGALEQLSTSEVKVNLLHGGVGAITETDVMLAAASKAIIIGFNVRPEANVRKAAEEAGVEIRLYRVIYEVIDDVKAAMSGLLEPEEREVILGRAEVRATFKVPKAGTVAGCFVTEGKIQNRALARVIRDGVVVFEGRIESLKRFKDDVREVAQGYECGVGLEKFNDIKEGDVIEAYTIEEIQRE 902
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_CALS8 (Translation initiation factor IF-2 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=infB PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 5.079e-47 Identity = 98/196 (50.00%), Postives = 141/196 (71.94%), Query Frame = 1 Query: 4 RVRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF 588 ++++L VI+K DVQGS+EA++ A++ L D VT+K + A G I+ SDV LA AS AII+GFNV+ + A+ + V+IR+YR+IYD+I+D++ AM+GLLE V ++V IG AEVR IF S S G +AGC V +GK+ + R+IRDG V+ G L SL+R K++V+EV AG ECG+ ++D +EGDI+EAF Sbjct: 656 QLKELRVIIKADVQGSVEALKSAIERLSNDKVTVKVIHAAVGAITESDVTLASASDAIIIGFNVRPEVGAMSLAEKEKVDIRMYRIIYDVINDIKAAMKGLLEPVYKEVIIGHAEVRQIFKSSSVGTIAGCYVLDGKITRTSNARIIRDGVVVYEGKLASLKRFKDDVREVAAGYECGMTFEKFNDIKEGDIVEAF 851
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_ALKMQ (Translation initiation factor IF-2 OS=Alkaliphilus metalliredigens (strain QYMF) GN=infB PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.663e-47 Identity = 95/202 (47.03%), Postives = 140/202 (69.31%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LN+I+K DVQGS++AV+Q+L+ L D V+L+ + G I+ SDV LA AS AII GFNV+ + + + V+IR YR+IY+ I+D+ AM G+L+ ++V +G AEVRA F G+G VAG ++EGK+++ IR++RDG VH G + SLRR K++VKEVN G ECG+G ++D +EGDIIEA+ + KR Sbjct: 505 IKELNIIVKADVQGSVQAVKQSLEKLSNDKVSLRTIHGGVGAITESDVMLAAASNAIITGFNVRPTSTATAISKKEKVDIRTYRIIYNAIEDIEAAMVGMLDPEFKEVDLGKAEVRAAFKVPGAGVVAGSYITEGKILRSASIRLVRDGIVVHEGAIGSLRRFKDDVKEVNTGYECGIGIDKFNDVKEGDIIEAYTMEEIKR 706 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |