EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PARD8 (Translation initiation factor IF-2 OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=infB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.699e-40 Identity = 88/202 (43.56%), Postives = 134/202 (66.34%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++LNVI+K DV GS+EA+ +L L + + + + +A G IS SDV LA AS AII+GF V+ + A+ +GVEIRLY +IYD I+++++AMEG+L ++ EV+ +F + G VAGCMV EGK+ + IR+IRDG ++ G L SL+R K++ KEV AGL+CG+ +++D + GD+IEA+ + K+T Sbjct: 771 QELNVIVKGDVDGSVEALSDSLIRLSTEEIQVNVIHKAVGQISESDVVLAAASNAIIIGFQVRPSLQARRNAEKEGVEIRLYSIIYDAIEEVKSAMEGMLSPEIKEEITAYVEVQQVFKITKVGTVAGCMVKEGKIKRTNKIRLIRDGIVIYAGELGSLKRFKDDAKEVVAGLDCGLNITNFNDIQVGDMIEAYEETEIKKT 972
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_LEPCP (Translation initiation factor IF-2 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=infB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.699e-40 Identity = 85/200 (42.50%), Postives = 131/200 (65.50%), Query Frame = 1 Query: 16 LNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 L +I+K DVQGS EA+ +L L D V ++ + A G IS SDV+LA+ASKA+I+GFNV+A + AD V++R Y VIYD +D++++AM G+L + + IG+AE+R +F ++ G +AG MV+ G + + C R++R+ ++ G +DS+RR+K++VKEV G ECG+ +Y D EGD +E F + RT Sbjct: 791 LALIIKADVQGSQEALAASLLKLSTDEVKVQIVHAAVGGISESDVNLALASKAVIIGFNVRADAGARKLADGNDVDLRYYNVIYDAVDEIKSAMSGMLAPEQREEAIGTAEIRTVFVATKIGTIAGSMVTSGLVRRNCRFRLLRNNIVIYTGEVDSVRRLKDDVKEVKEGFECGIKLKNYTDIAEGDQLEFFEIKEVART 990
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BURCM (Translation initiation factor IF-2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=infB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.699e-40 Identity = 85/203 (41.87%), Postives = 129/203 (63.55%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L D V ++ + A G IS +DV+LA ASKA+I+GFN +A + A++ G++IR Y +IYD +D+++ AM G+L + +V G EVR +F G VAGCMV++G + + +RV+R+ + G L+SL+R K++VKEV G ECG+ +++D EGD E F + RT Sbjct: 768 VQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAVIIGFNTRADAQARKLAESNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQVFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFECGMSVKNFNDVTEGDQFEVFEVTEVART 970
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_AQUAE (Translation initiation factor IF-2 OS=Aquifex aeolicus GN=infB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.699e-40 Identity = 85/202 (42.08%), Postives = 132/202 (65.35%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++L +++K D GS+EA++++L+ L + V +K + A G I+ +D+ LA AS AI++GFN + + + + V++RLY VIY+ I+D++ A+ GLLE ++++ IG AEVRA F G VAGC V GKLV+G R+IR+G ++ G ++SL+R KE+V+EV AG ECGV DY+D + GD IE + K T Sbjct: 603 KELRIVLKTDTMGSLEALKKSLEELSNEKVQVKIIHGAVGGITENDIMLAKASGAIVIGFNTRPDPKARELMEKEKVDVRLYGVIYEAIEDVKKALVGLLEPIKKEEVIGMAEVRATFKIKKVGTVAGCYVLNGKLVRGAKARLIREGVVIYDGEIESLKRFKEDVQEVTAGYECGVKLKDYNDVKVGDQIECYEIRYEKPT 804
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_ACISJ (Translation initiation factor IF-2 OS=Acidovorax sp. (strain JS42) GN=infB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.699e-40 Identity = 82/203 (40.39%), Postives = 133/203 (65.52%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ +L L + + ++ + G IS SDV+LA+ASKAI++GFNV+A + A+ V+IR Y +IYD +D+++ AM G+L + + IG+AE+R +F +S G VAG ++ G++ + C R++RD ++ G ++S+RR+K++VKEV G ECG+ +Y+D +EGD +E F + RT Sbjct: 740 VQTLPLIIKADVQGSQEALAASLLKLSTEEIRVQIVYSGVGGISESDVNLAIASKAIVIGFNVRADAQARKTAEGNDVDIRYYNIIYDAVDEVKAAMSGMLAPEQREEAIGTAEIRTVFVASKIGTVAGSYITSGQVTRNCKFRLLRDNIVIYTGDVESVRRMKDDVKEVKEGFECGIKLKNYNDIKEGDQLEFFEIKEIART 942
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_ACIAD (Translation initiation factor IF-2 OS=Acinetobacter sp. (strain ADP1) GN=infB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.699e-40 Identity = 91/203 (44.83%), Postives = 129/203 (63.55%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V +NV++K DV+G++EA+ AL L D V ++ + G I+ SDV LA +S+A++LGFNV+A + + +D G++IR Y +IY+LIDD++NAM G L + +G AEVR +F SS G AGCMV EG L + IRV+RD V G L+SLRR KE V+EV AG+ECG+ Y D + D IE ++ KR+ Sbjct: 696 VPTVNVVLKADVRGTLEALTAALNELSMDEVRVRVISSGVGAITESDVTLAESSEAVLLGFNVRADTTARQKSDQDGIDIRYYSIIYELIDDVKNAMSGKLAPEHRETILGVAEVREVFHSSKFGAAAGCMVLEGMLHRNKPIRVLRDDVVVFQGELESLRRYKEVVEEVRAGMECGLAVKGYKDIKAKDKIEVYDVQLIKRS 898
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_VESOH (Translation initiation factor IF-2 OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 86/202 (42.57%), Postives = 127/202 (62.87%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 + +NV++K DV+GS +A+ +AL+ L D V +K + G I+ +D+ LA S A++LGFNV+A + ADN+GV + Y +IY+LI+D++ M GLL + IG A V+ IF S G +AGCMV EG + + IRV+RD + G L+SLRR K++V EV +G ECG+G +Y D + GD IE F ++R R Sbjct: 612 ISTVNVLLKADVRGSAQALIEALEELSTDEVRVKVVSSGVGGINNTDITLAATSSALVLGFNVRADAVARKTADNEGVRVEYYSIIYNLINDVKAIMSGLLSPELSENIIGIASVKNIFKSQKMGDIAGCMVDEGMVKRDSLIRVLRDSVVIFDGKLESLRRFKDDVNEVKSGTECGIGVLNYTDVQPGDQIEIFERVERAR 813
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_VEREI (Translation initiation factor IF-2 OS=Verminephrobacter eiseniae (strain EF01-2) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 83/203 (40.89%), Postives = 130/203 (64.04%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L D V ++ + A G IS SD++LA+ASKA+++GFNV+A + A+ GV + Y +IYD +D++R AM G+L + + IG+AE+R +F++ G VAG ++ G + + R++R VH G +DS++R+K++V+EV G ECG+ +Y D EGD +E F+ Q RT Sbjct: 787 VKMLPIIVKADVQGSQEALAQSLLKLSTDEVKVQLVYAAVGAISESDINLAIASKAVVIGFNVRADAGARKLAEGNGVALHYYSIIYDAVDELRVAMSGMLAPEQREEIIGTAEIRTVFTASKIGTVAGSYITSGMVHRNARFRLLRANVVVHTGEVDSIKRLKDDVREVKEGFECGIKLKNYSDILEGDQLEFFDIKQIART 989
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_VARPS (Translation initiation factor IF-2 OS=Variovorax paradoxus (strain S110) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 82/203 (40.39%), Postives = 131/203 (64.53%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L D V ++ + G IS SD++LA+ASKAI++GFNV+A + A+ GV++ Y +IYD +D+++ AM G+L + IGSAE+R +F +S G VAG ++ G + + R++RD ++ G +DS++R+K++V+EV G ECG+ +Y+D +EGD +E F + RT Sbjct: 781 VQTLRIIIKADVQGSQEALAQSLLKLATDEVKVQIVYAGVGGISESDINLAIASKAIVIGFNVRADAGARKLAEGNGVQLNYYSIIYDAVDEIKVAMSGMLAPERREEIIGSAEIRTVFVASKIGTVAGSYITSGSVNRSAHFRLLRDNVVIYTGEVDSIKRMKDDVREVREGFECGIKLKNYNDIKEGDQLEFFEIKEIART 983
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSEAE (Translation initiation factor IF-2 OS=Pseudomonas aeruginosa GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 83/202 (41.09%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA++ +L L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV+EG + + IRV+RD + G L+SLRR K++V EV AG+ECG+G Y+D + GD IE F ++ R+ Sbjct: 638 KTLNIVLKADVRGSLEALQGSLSGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEAEGLDMRYYNVIYDIIEDVKKALTGMLGSDLRENILGIAEVRDVFRSPKFGAIAGCMVTEGMVHRNRPIRVLRDDVVIFEGELESLRRFKDDVAEVRAGMECGIGVKSYNDVKVGDKIEVFEKVEVARS 839 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |