EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSEAB (Translation initiation factor IF-2 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 83/202 (41.09%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA++ +L L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV+EG + + IRV+RD + G L+SLRR K++V EV AG+ECG+G Y+D + GD IE F ++ R+ Sbjct: 638 KTLNIVLKADVRGSLEALQGSLSGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEAEGLDMRYYNVIYDIIEDVKKALTGMLGSDLRENILGIAEVRDVFRSPKFGAIAGCMVTEGMVHRNRPIRVLRDDVVIFEGELESLRRFKDDVAEVRAGMECGIGVKSYNDVKVGDKIEVFEKVEVARS 839
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSEA8 (Translation initiation factor IF-2 OS=Pseudomonas aeruginosa (strain LESB58) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 83/202 (41.09%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA++ +L L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV+EG + + IRV+RD + G L+SLRR K++V EV AG+ECG+G Y+D + GD IE F ++ R+ Sbjct: 638 KTLNIVLKADVRGSLEALQGSLSGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEAEGLDMRYYNVIYDIIEDVKKALTGMLGSDLRENILGIAEVRDVFRSPKFGAIAGCMVTEGMVHRNRPIRVLRDDVVIFEGELESLRRFKDDVAEVRAGMECGIGVKSYNDVKVGDKIEVFEKVEVARS 839
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSEA7 (Translation initiation factor IF-2 OS=Pseudomonas aeruginosa (strain PA7) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 83/202 (41.09%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA++ +L L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV+EG + + IRV+RD + G L+SLRR K++V EV AG+ECG+G Y+D + GD IE F ++ R+ Sbjct: 635 KTLNIVLKADVRGSLEALQGSLSGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEAEGLDMRYYNVIYDIIEDVKKALTGMLGSDLRENILGIAEVRDVFRSPKFGAIAGCMVTEGMVHRNRPIRVLRDDVVIFEGELESLRRFKDDVAEVRAGMECGIGVKSYNDVKVGDKIEVFEKVEVARS 836
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BURTA (Translation initiation factor IF-2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 86/203 (42.36%), Postives = 128/203 (63.05%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L + V ++ + A G IS SDV+LA ASKA+I+GFN +A + A+ G++IR Y +IYD +D+++ AM G+L + +V G EVR +F G VAGCMV++G + + +RV+R+ + G LDSL+R K++VKEV G ECG+ +++D EGD E F + RT Sbjct: 773 VQNLPLIIKADVQGSQEALVQSLLKLSTNEVRVQIVHSAVGGISESDVNLATASKAVIIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQVFKVPKVGAVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFECGMSIKNFNDIVEGDQFEVFEVTEVART 975
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BURS3 (Translation initiation factor IF-2 OS=Burkholderia sp. (strain 383) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 85/203 (41.87%), Postives = 129/203 (63.55%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L D V ++ + A G IS +DV+LA ASKA+I+GFN +A + A++ G++IR Y +IYD +D+++ AM G+L + +V G EVR +F G VAGCMV++G + + +RV+R+ + G L+SL+R K++VKEV G ECG+ +++D EGD E F + RT Sbjct: 769 VQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAVIIGFNTRADAQARKLAESNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQVFKVPKIGAVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFECGMSVKNFNDIVEGDQFEVFEVTEVART 971
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BURM1 (Translation initiation factor IF-2 OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=infB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.526e-40 Identity = 86/203 (42.36%), Postives = 128/203 (63.05%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L D V ++ + A G IS SDV+LA ASKA+I+GFN +A + A+ G++IR Y +IYD +D+++ AM G+L + +V G EVR +F G VAGCMV++G + + +RV+R+ + G L+SL+R K++VKEV G ECG+ +++D EGD E F + RT Sbjct: 766 VQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAVIIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQVFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFECGMSVKNFNDILEGDQFEVFEVTEVART 968
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_RHOPS (Translation initiation factor IF-2 OS=Rhodopseudomonas palustris (strain BisB5) GN=infB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.604e-40 Identity = 87/197 (44.16%), Postives = 124/197 (62.94%), Query Frame = 1 Query: 22 VIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQR 603 +I+K DVQGS+EA+ +L+ L D V + L G IS SDV LA A+ILGF+V+A A G+EIR Y +IYDL+DD++ AM GLL + +G+A++ IF+ S G+VAGC V++G + +G +R+IRD VH G L +L+R K+ VKEV +G ECG+ +Y D GD+IE + +IQR Sbjct: 685 LIVKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFSAVILGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAQILEIFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFENYTDMRAGDVIECYRVETIQR 881
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_RHOP2 (Translation initiation factor IF-2 OS=Rhodopseudomonas palustris (strain HaA2) GN=infB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.604e-40 Identity = 87/197 (44.16%), Postives = 124/197 (62.94%), Query Frame = 1 Query: 22 VIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQR 603 +I+K DVQGS+EA+ +L+ L D V + L G IS SDV LA A+ILGF+V+A A G+EIR Y +IYDL+DD++ AM GLL + +G+A++ IF+ S G+VAGC V++G + +G +R+IRD VH G L +L+R K+ VKEV +G ECG+ +Y D GD+IE + +IQR Sbjct: 688 LIVKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFSAVILGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPTLRETMLGNAQILEIFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFENYTDMRAGDVIECYRVETIQR 884
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_RHILO (Translation initiation factor IF-2 OS=Rhizobium loti GN=infB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.604e-40 Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++ +++K DVQGSIEA+ AL L D V + + G I+ SDV LA S A I+GFNV+A + A G+EIR Y +IY+L+DD++ A+ GLL + IG+AE+ IF + G++AGC V+EGK+ +G G+R+IRD +H G L +L+R K+ V EV G ECG+ +Y+D GDIIE F RT Sbjct: 657 LKEFPLVIKGDVQGSIEAINAALDKLGTDEVRARIVHAGAGAITESDVSLAETSGAAIIGFNVRANVQARAAAAAAGIEIRYYSIIYNLVDDVKAALSGLLSPERRETFIGNAEILEIFDITKVGKIAGCRVTEGKVERGAGVRLIRDNVVIHEGTLKTLKRFKDEVSEVPGGQECGMAFQNYEDMRVGDIIECFRVEMVTRT 859
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_METSB (Translation initiation factor IF-2 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=infB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.604e-40 Identity = 84/202 (41.58%), Postives = 129/202 (63.86%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++ +++K DVQGS+EA+ L+ L D V + + G I+ SDV LA AS A+++GFNV+A + A+ +G+EIR Y +IY+L+DD++ AM GLL + +G+AE+ +F S G+VAGC V++G++ +G +R+IRD VH G L +L+R K+ VKEV AG ECG+ Y D GD+IE + + +RT Sbjct: 684 KEFPLVIKADVQGSLEAIVATLEKLNTDEVAARIIHAGVGGITESDVTLAEASGAVLIGFNVRAHKEGRQLAEQQGLEIRYYNIIYNLVDDVKAAMSGLLAPTLREDMLGNAEILEVFHISKVGKVAGCRVTDGRVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVVAGQECGMAFEHYQDMRVGDVIECYRVEEIQRT 885 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |