EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_MACCJ (Translation initiation factor IF-2 OS=Macrococcus caseolyticus (strain JCSC5402) GN=infB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40 Identity = 88/202 (43.56%), Postives = 137/202 (67.82%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVR-AIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 ++ LNVI+K DVQGS+EA+ +L + + V ++ + A G I+ SDV LA AS II+GFNV+ + K A+ +GV++RL+R+IY +I+++ +AM+G+L+ E+ IG AEVR I S G VAG V++GK+ + +R+IRDG V+ G +D+L+R K++V+EV G ECG+ +++D +EGDI EAF + KR Sbjct: 524 MKDLNVIIKGDVQGSVEALAASLMKIDVEGVNVRIIHTAVGAINESDVTLASASNGIIIGFNVRPDVNAKRAAEAEGVDMRLHRIIYKVIEEIESAMKGMLDPEFEEKVIGQAEVRQTINISKVGTVAGSYVTDGKITRDSQVRIIRDGIVVYEGQVDALKRFKDDVREVAQGYECGITIENFNDIKEGDIFEAFVMEEIKR 725
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_LEPBL (Translation initiation factor IF-2 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=infB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40 Identity = 88/202 (43.56%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++L VI+K DV+GS EA++++L+ L V L + G I DV LA AS A+I+GF+V+A A+ + V+I+ Y +IY ++D+++ AMEGLLE + + IG+AE+R IF S G +AGCMV+ GK+ K +RVI DG T G L SL+RVK++V +V +G ECG+ Y+D++ GD IEA+N KR Sbjct: 660 LKELKVIIKADVRGSAEAIKESLEKLSTPEVKLNVIQSGAGAIVDMDVMLASASNALIIGFHVRANPKTIALAEKEQVQIKYYNIIYQVVDEIKLAMEGLLEPEKIEEVIGTAEIREIFKVSKIGNIAGCMVTSGKIQKSANVRVISDGVTKFDGKLKSLKRVKDDVNDVVSGFECGIQVDGYNDFKVGDTIEAYNVTVIKR 861
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_LEPBJ (Translation initiation factor IF-2 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=infB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40 Identity = 88/202 (43.56%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++L VI+K DV+GS EA++++L+ L V L + G I DV LA AS A+I+GF+V+A A+ + V+I+ Y +IY ++D+++ AMEGLLE + + IG+AE+R IF S G +AGCMV+ GK+ K +RVI DG T G L SL+RVK++V +V +G ECG+ Y+D++ GD IEA+N KR Sbjct: 648 LKELKVIIKADVRGSAEAIKESLEKLSTPEVKLNVIQSGAGAIVDMDVMLASASNALIIGFHVRANPKTIALAEKEQVQIKYYNIIYQVVDEIKLAMEGLLEPEKIEEVIGTAEIREIFKVSKIGNIAGCMVTSGKIQKSANVRVISDGVTKFDGKLKSLKRVKDDVNDVVSGFECGIQVDGYNDFKVGDTIEAYNVTVIKR 849
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_DEHSC (Translation initiation factor IF-2 OS=Dehalococcoides sp. (strain CBDB1) GN=infB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40 Identity = 83/196 (42.35%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSG-RVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFN 591 +++LN+I+K DVQGS+E ++ +L+ L D + + G+++ SDV LA+AS +I+GF+ + + AD + ++IR Y +IY LI+D+ A++GLLE ++V G AEVRA+F S +AGCMV EGKLVK +R++R G+ + +SLRR KE+VKEV AG ECGVG D++++++ DI+E ++ Sbjct: 393 IKELNIILKTDVQGSLEPIKDSLEKLSTDKIKININRSGAGNVTESDVMLAMASGGLIIGFSTGIETNAQRLADAEDIDIRHYDIIYKLIEDVDKALQGLLEPTIKEVIDGRAEVRAVFESTKKLSIAGCMVLEGKLVKNSQVRLLRGGEVIVDAPSNSLRRFKEDVKEVVAGYECGVGLKDFNEFQKSDILEFYH 588
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_DEHSB (Translation initiation factor IF-2 OS=Dehalococcoides sp. (strain BAV1) GN=infB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40 Identity = 83/196 (42.35%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSG-RVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFN 591 +++LN+I+K DVQGS+E ++ +L+ L D + + G+++ SDV LA+AS +I+GF+ + + AD + ++IR Y +IY LI+D+ A++GLLE ++V G AEVRA+F S +AGCMV EGKLVK +R++R G+ + +SLRR KE+VKEV AG ECGVG D++++++ DI+E ++ Sbjct: 393 IKELNIILKTDVQGSLEPIKDSLEKLSTDKIKININRSGAGNVTESDVMLAMASGGLIIGFSTGIETNAQRLADAEDIDIRHYDIIYKLIEDVDKALQGLLEPTIKEVIDGRAEVRAVFESTKKLSIAGCMVLEGKLVKNSQVRLLRGGEVIVDAPSNSLRRFKEDVKEVVAGYECGVGLKDFNEFQKSDILEFYH 588
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_CHLCH (Translation initiation factor IF-2 OS=Chlorobium chlorochromatii (strain CaD3) GN=infB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40 Identity = 81/202 (40.10%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++LNVI+K D GSI+A+ L + D V ++ + Q G I+ +DV LA AS AII+GF V+ + K A+ + ++IR Y VIY +++D+ A+EG+L + +GS E+R IF G V GC V EGK+ + +R++RDG ++ G L +L+R K++VKEV++G ECG+ +YDD + GD++EA+ +++KR Sbjct: 819 MKELNVIIKADTDGSIQALADGLMKIQNDEVKVQLIHQGVGQITETDVLLAAASDAIIIGFRVRPNVNAKKLAEKEDLDIRFYSVIYHVLEDVETALEGMLSPELHEESLGSIEIRQIFRVPKVGNVGGCYVLEGKVPRDAKVRLLRDGVQIYEGQLAALKRFKDDVKEVDSGYECGLSLKNYDDIKVGDVVEAYRIVEKKR 1020
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BURVG (Translation initiation factor IF-2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=infB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40 Identity = 85/203 (41.87%), Postives = 128/203 (63.05%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L D V ++ + A G IS +DV+LA ASKA+I+GFN +A + A+ G++IR Y +IYD +D+++ AM G+L + +V G EVR +F G VAGCMV++G + + +RV+R+ + G L+SL+R K++VKEV G ECG+ +++D EGD E F + RT Sbjct: 771 VQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAVIIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQVFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFECGMSVKNFNDIVEGDQFEVFEVTEVART 973
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_AGRVS (Translation initiation factor IF-2 OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=infB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.854e-40 Identity = 83/202 (41.09%), Postives = 125/202 (61.88%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++ +++K DVQGS+EA+ AL L D V + + G I+ SD+ LA AS A I+GFNV+A + ++ G EIR Y +IYDL+DD++ AM GLL + +G+AE+ +F+ + +G+VAGC V EGK+ +G G+R++RD +H G L +L+R K+ V +V G ECG+ +Y+D GD IE F RT Sbjct: 724 KEFPLVIKADVQGSVEAIVAALDKLGTDEVRARIVHSGAGAITESDISLAEASNAAIIGFNVRANVQARAASERTGTEIRYYNIIYDLVDDVKAAMSGLLSPERRETFLGNAEILEVFNITKTGKVAGCRVVEGKVERGAGVRLVRDNVVIHEGKLKTLKRFKDEVADVPMGQECGMAFENYEDIRAGDTIECFRVEHITRT 925
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSEU2 (Translation initiation factor IF-2 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=infB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39 Identity = 83/202 (41.09%), Postives = 130/202 (64.36%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA+ AL L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV EG + + IRV+R+ + G L+SLRR K++ EV AG+ECG+G Y+D + GD IE F +Q R+ Sbjct: 639 KTLNIVLKSDVRGSLEALNGALNGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVKKALTGMLGSDVRENILGIAEVRDVFRSPKFGAIAGCMVLEGTVYRNRPIRVLREDIVIFEGELESLRRFKDDAAEVRAGMECGIGVKSYNDVKVGDKIEVFEKVQVARS 840
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSEPF (Translation initiation factor IF-2 OS=Pseudomonas fluorescens (strain Pf0-1) GN=infB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39 Identity = 83/202 (41.09%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA++ AL L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV EG + + IRV+R+ + G L+SLRR K++ EV AG+ECG+G Y+D + GD IE F +Q R+ Sbjct: 635 KTLNIVLKSDVRGSLEALQGALNGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVKKALTGMLGSDVRENILGVAEVRDVFRSPKFGAIAGCMVIEGTVHRNRPIRVLREDIVIFEGELESLRRFKDDASEVRAGMECGIGVKSYNDVKVGDKIEVFEKVQVARS 836 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |