EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_NITMU (Translation initiation factor IF-2 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=infB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39 Identity = 80/195 (41.03%), Postives = 130/195 (66.67%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF 588 V+ L++I+K DVQGS EA+ ALQ L D V + + G I+ SD++LA+ASKA+++GFN +A + ++ GV++R Y +IY+ +D+++ A+ G++ ++ G E+R +F S G VAGC+V EG + +G +RVIR+G+ +H G LDSL+R K++VKEV AG ECG+ +++D + GD +E + Sbjct: 673 VKVLSLIIKADVQGSYEALTHALQQLSTDEVKVNIIHSGVGAITESDINLALASKAVVIGFNSRADAVARKLINSAGVDVRYYSIIYEAVDEIKAALSGMMAPERKENITGLLEIREVFRISKVGAVAGCLVQEGFVRRGSLVRVIRNGQVIHTGELDSLKRFKDDVKEVRAGFECGLSLKNFNDIQVGDQLETY 867
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_CHLPD (Translation initiation factor IF-2 OS=Chlorobium phaeobacteroides (strain DSM 266) GN=infB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39 Identity = 81/202 (40.10%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++L+VI+K D GSI+A+ L + + V ++ + Q G I+ +DV LA AS AII+GF V+ + K A+ + +++R Y VIY +++D+ A+EG+L + +GS E+R +F G V GC EGK+ + +R++RDG V+ G LD+LRR K++VKEV+AG ECG+ +YDD + GDI+EA+ +++KR Sbjct: 788 MKELSVIIKADTDGSIQALADGLMKIHNEEVKVQIIHQGVGQITETDVLLAAASDAIIIGFRVRPNVNAKKLAEKEDLDVRFYSVIYHVLEDVEKALEGMLSPELHEESLGSLEIRQVFRVPKVGNVGGCYALEGKVFRDSKVRLLRDGVQVYDGQLDTLRRFKDDVKEVDAGYECGLSLKNYDDIKVGDIVEAYKIVEKKR 989
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BURCJ (Translation initiation factor IF-2 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=infB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39 Identity = 85/203 (41.87%), Postives = 128/203 (63.05%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L D V ++ + A G IS +DV+LA ASKA+I+GFN +A + A+ G++IR Y +IYD +D+++ AM G+L + +V G EVR +F G VAGCMV++G + + +RV+R+ + G L+SL+R K++VKEV G ECG+ +++D EGD E F + RT Sbjct: 768 VQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAVIIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQVFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFECGMSVKNFNDIIEGDQFEVFEVTEVART 970
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BLOPB (Translation initiation factor IF-2 OS=Blochmannia pennsylvanicus (strain BPEN) GN=infB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39 Identity = 89/200 (44.50%), Postives = 133/200 (66.50%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQD-NVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQ 600 V +LN+I+K D +GS EA+R++L+ L +VT+K L + G I+ +DV LA AS A+I+GFNV+A + + + +++R Y VIYDLID+++ A+ G+L + IG A+VR +F S G VAGCMV EG + + IRVIRD VH G L+SLRR K++V EV +G+ECG+G +Y + GD+IE F+ ++ Sbjct: 688 VSELNLIVKSDTKGSSEAIRESLENLSTGGDVTIKILSSSIGGITETDVALAAASNAVIVGFNVRADPTARRIIEADQLDVRYYSVIYDLIDEVKQAVHGMLAPRYKHEIIGLAKVRNVFRSPKYGNVAGCMVVEGMIKRYKKIRVIRDNIVVHEGELESLRRFKDDVNEVRSGIECGIGIKNYKNIHSGDMIEVFDMVK 887
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BACSK (Translation initiation factor IF-2 OS=Bacillus clausii (strain KSM-K16) GN=infB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.026e-39 Identity = 86/202 (42.57%), Postives = 133/202 (65.84%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 V+ +NVI+K DVQGS+EA++ +L+ + V + + G I+ SD+ LA AS AI++GFNV+ + K A+ + V+IRL+RVIY+ ID++ AM+G L+ E+ IG EVR F S G +AG V+EGK+ + +R+IRDG ++ G L++L+R K++ KEV AG ECG+ ++D +EGD+IEA+ + KR Sbjct: 559 VKDINVIIKADVQGSVEAMKGSLEKIDVAGVKVNIIHTGAGAITESDIILASASNAIVIGFNVRPDVNAKRVAEAENVDIRLHRVIYNAIDEIEQAMKGALDPEFEEKVIGQVEVRTTFKVSKVGTIAGSYVTEGKITRNSSVRLIRDGIVIYEGELNALKRYKDDAKEVQAGYECGITLDKFNDIKEGDMIEAYVMEEVKR 760
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSEFS (Translation initiation factor IF-2 OS=Pseudomonas fluorescens (strain SBW25) GN=infB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.340e-39 Identity = 82/202 (40.59%), Postives = 130/202 (64.36%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA+ AL L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV EG + + IRV+R+ + G L+SLRR K++ EV AG+ECG+G Y+D + GD IE + +Q R+ Sbjct: 639 KTLNIVLKSDVRGSLEALNGALNGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVKKALTGMLGSDVRENILGVAEVRDVFRSPKFGAIAGCMVIEGTVYRNRPIRVLREDIVIFEGELESLRRFKDDASEVRAGMECGIGVKSYNDVKAGDKIEVYEKVQVARS 840
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSEF5 (Translation initiation factor IF-2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=infB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.340e-39 Identity = 83/202 (41.09%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA++ AL L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV EG + + IRV+R+ + G L+SLRR K++ EV AG+ECG+G Y+D + GD IE F +Q R+ Sbjct: 636 KTLNIVLKSDVRGSLEALQGALNGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVKKALTGMLGSDVRENILGVAEVRDVFRSPKFGAIAGCMVIEGVVHRNRPIRVLREDIVIFEGELESLRRFKDDASEVRAGMECGIGVKSYNDVKVGDKIEVFEKVQVARS 837
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSE14 (Translation initiation factor IF-2 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=infB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.340e-39 Identity = 83/202 (41.09%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA++ AL L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV EG + + IRV+R+ + G L+SLRR K++ EV AG+ECG+G Y+D + GD IE F +Q R+ Sbjct: 641 KTLNIVLKSDVRGSLEALQGALGGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVKKALTGMLGSDVRENILGIAEVRDVFRSPKFGAIAGCMVLEGTVYRNRPIRVLREDIVIFEGELESLRRFKDDAAEVRAGMECGIGVKSYNDVKVGDKIEVFEKVQVARS 842
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BRASB (Translation initiation factor IF-2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=infB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.340e-39 Identity = 85/201 (42.29%), Postives = 124/201 (61.69%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQR 603 ++ +++K DVQGS+EA+ +L+ L D V + L G IS SDV LA A I+GF+V+A A G+EIR Y +IYDL+DD++ AM GLL + +G+A++ +F+ S G+VAGC V++G + +G +R+IRD VH G L +L+R K+ VKEV AG ECG+ Y D GD+IE + +IQR Sbjct: 719 KEFPLVIKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAAIIGFSVRANKEAAALAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAQILEVFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQAGQECGMAFESYGDMRVGDVIECYRVETIQR 919
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_ROSCS (Translation initiation factor IF-2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=infB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.750e-39 Identity = 85/204 (41.67%), Postives = 131/204 (64.22%), Query Frame = 1 Query: 4 RVRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGR-VAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++++LN+I+K DVQGSI A+ AL L D V ++ + + TG I+ SDV+LA+AS AII+GFN + + + A+ GV+IR Y +IY L +D++ AM G+LE +V G AEVR F + VAG V+EGK+ + +RV+R+G +H G + SL+R K++V+EV AG ECG+ ++D GD +E + + +RT Sbjct: 534 KIKELNIILKADVQGSIGAIEHALSQLNTDEVQIRIIHRGTGTITESDVNLAIASHAIIIGFNARPDPAARRQAEQYGVDIRFYNIIYQLTEDIKKAMIGMLEPEYREVTEGFAEVRTTFRLPTREIVAGLYVTEGKITRQYNVRVLRNGVVIHDGKIASLKRFKDDVREVQAGYECGLIVEGFNDITPGDTMEFYRRERVERT 737 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |