EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSYCK (Translation initiation factor IF-2 OS=Psychrobacter cryohalolentis (strain K5) GN=infB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.750e-39 Identity = 90/203 (44.33%), Postives = 127/203 (62.56%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V LN+++K DV+GS+EA+ AL L D V ++ + G IS SDV LA +S+A++LGFNV+A + + +D+ ++IR Y VIY LIDD++ AM G+L + +G A+VR +F SS G AGCMV EG + + IRV+R+ + + G L SLRR KE+V EV G+ECG+ Y D E GD IE F + RT Sbjct: 706 VSYLNIVLKTDVRGSLEALLAALNELSTDEVKVRVISSGVGPISESDVTLAESSEAVLLGFNVRADATARRKSDSANMDIRYYSVIYGLIDDVKAAMSGMLAPEHREKILGVADVREVFRSSKFGAAAGCMVVEGTIYRNKPIRVLRNDQVIFTGQLQSLRRYKEDVNEVRTGMECGLAVRGY-DVEAGDKIEVFEIQEFART 907
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSYA2 (Translation initiation factor IF-2 OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=infB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.750e-39 Identity = 90/203 (44.33%), Postives = 126/203 (62.07%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V LN+++K DV+GS+EA+ AL L D V ++ + G IS SDV LA +S+A++LGFNV+A + + +D ++IR Y VIY LIDD++ AM G+L + +G A+VR +F SS G AGCMV EG + + IRV+R+ + + G L SLRR KE+V EV G+ECG+ Y D E GD IE F + RT Sbjct: 706 VSYLNIVLKTDVRGSLEALLSALNELSTDEVKVRVISSGVGPISESDVTLAESSEAVLLGFNVRADATARRKSDTANMDIRYYSVIYGLIDDVKAAMSGMLAPEHREKILGVADVREVFRSSKFGAAAGCMVVEGTIYRNKPIRVLRNDQVIFTGQLQSLRRYKEDVNEVRTGMECGLAVRGY-DVEAGDKIEVFEIQEFART 907
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_NITWN (Translation initiation factor IF-2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=infB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.750e-39 Identity = 86/197 (43.65%), Postives = 122/197 (61.93%), Query Frame = 1 Query: 22 VIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQR 603 +I+K DVQGS+EA+ +L+ L D V + L G IS SDV LA A I+GF+V+A A G+EIR Y +IYDL+DD++ AM GLL + +G+AE+ +F+ S G+VAGC V++G + +G +R+IRD VH G L +L+R K+ VKEV +G ECG+ Y D GD+IE + +IQR Sbjct: 673 LIIKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAAIIGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAEILEVFNISKVGKVAGCRVTDGSVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFESYGDMRVGDVIECYRVETIQR 869
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_NITOC (Translation initiation factor IF-2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=infB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.750e-39 Identity = 84/201 (41.79%), Postives = 128/201 (63.68%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRK 606 +R LN+++K DVQGS EA+ +L L D +K + G I+ +DV+LAVAS A+I+GFNV+A + + KG+++ Y VIY+ ID+++ A+ G+L+ + IG A V +F S G +AGC+V EG + + IRV+RD V G L+SLRR K++V+EV AG ECG+G DY D + GD IE + ++++ Sbjct: 642 IRALNLVIKADVQGSAEALSDSLTKLSTDKARVKVVAAGVGGINETDVNLAVASNAVIIGFNVRADAAARRLIAEKGIDLHYYSVIYNAIDEIKGALIGILDPEYREEIIGLARVDDVFRSPKLGAIAGCLVIEGSVRRNNPIRVLRDNIVVFEGQLESLRRFKDDVQEVRAGTECGIGVKDYKDVKVGDQIEVYERVRKE 842
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_HELHP (Translation initiation factor IF-2 OS=Helicobacter hepaticus GN=infB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.750e-39 Identity = 82/203 (40.39%), Postives = 129/203 (63.55%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDL-AVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 ++ L +I+K D QGS+EA++ +L+ L D V + + G IS SD+ L A ++ ++ILGFNV+ GSVK A GVEI+ Y +IY L+DD++ + GL+ + E+ G AEVR F+ G +AGCMV +G + +G +R+IRDG VH G + SL+R K++ KEV+ G ECG+ +++D + GD+ E + I + + Sbjct: 678 LKTLPLIIKADTQGSLEAIKASLEKLSNDEVRINIIGFGVGGISESDITLCATSTNSLILGFNVRPTGSVKAKAKELGVEIKTYSIIYALLDDIKALLSGLMSPIVEEENTGQAEVRETFNIPKVGTIAGCMVVDGSIQRGIKVRLIRDGVVVHTGAISSLKRFKDDAKEVSKGYECGIMLENHNDIKVGDVFETYKEITKTK 880
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_STRM5 (Translation initiation factor IF-2 OS=Stenotrophomonas maltophilia (strain R551-3) GN=infB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.285e-39 Identity = 87/200 (43.50%), Postives = 125/200 (62.50%), Query Frame = 1 Query: 16 LNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 LN+++K DVQGS++A+ QAL L +++ + + G I+ SD + A ASKA ++GFNV+A S + ++ GV++R + +IYD+ID ++ GLL + IG AEVR +F SS G VAG MV EG + + IRV+RD + G L+SLRR KENV+EV G ECG+ Y+D + GD IE F I+ RT Sbjct: 683 LNLVIKADVQGSVQALSQALVALSNEDIRINVIHSGVGGITESDANSAAASKATVIGFNVRADASARRIIESNGVDLRYFSIIYDVIDQVKQVASGLLGVEIREEIIGIAEVRDVFRSSKLGAVAGSMVIEGVVKRNKPIRVLRDSVVIFEGELESLRRFKENVEEVRNGTECGIAVKAYNDVKPGDQIECFERIEVPRT 882
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_RHOPB (Translation initiation factor IF-2 OS=Rhodopseudomonas palustris (strain BisB18) GN=infB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.285e-39 Identity = 87/197 (44.16%), Postives = 122/197 (61.93%), Query Frame = 1 Query: 22 VIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQR 603 +I+K DV GS+EA+ +L+ L D VT + L G IS SDV LA A I+GFNV+A A G+EIR Y +IYDL+DD++ AM GLL + +G+A + +F+ S G+VAGC V++G + +G +R+IRD VH G L +L+R K+ VKEV +G ECG+ +Y D GDIIE + +IQR Sbjct: 682 LIIKADVAGSLEAILGSLEKLGTDEVTARILHAGVGGISESDVTLAEGFNAAIIGFNVRAHKEAAAAAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNALILEVFNISKVGKVAGCRVTDGSVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFENYGDMRAGDIIECYRVETIQR 878
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PSESM (Translation initiation factor IF-2 OS=Pseudomonas syringae pv. tomato GN=infB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.285e-39 Identity = 82/202 (40.59%), Postives = 130/202 (64.36%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 + LN+++K DV+GS+EA+ AL L D V ++ + G I+ SD +LA+AS A++ GFNV+A + + +G+++R Y VIYD+I+D++ A+ G+L + + +G AEVR +F S G +AGCMV EG + + IRV+R+ + G L+SLRR K++ +V AG+ECG+G Y+D + GD IE F +Q R+ Sbjct: 639 KTLNIVLKSDVRGSLEALNGALNGLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMRYYNVIYDIIEDVKKALTGMLGSDVRENILGIAEVRDVFRSPKFGAIAGCMVLEGTVYRNRPIRVLREDIVIFEGELESLRRFKDDAADVRAGMECGIGVKSYNDVKVGDKIEVFEKVQVARS 840
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_GLUOX (Translation initiation factor IF-2 OS=Gluconobacter oxydans GN=infB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.285e-39 Identity = 79/194 (40.72%), Postives = 126/194 (64.95%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF 588 +++ +++K DVQGS EA+ +Q L + V ++ L + G I+ SD+ LA AS AII+ FNV+A + A +GV+IR Y +IY + DD+ ++G + + +G AEVR +F+ + +G+VAGC V+EG + +GCG+R++RD +H G L L+R K++VKEV G ECG+ A Y+D EGD++E + Sbjct: 717 KEVALLIKADVQGSAEAISTTVQKLAHEEVAVRVLNASVGQITESDIQLAKASDAIIVAFNVRATTQARELAQREGVDIRYYSIIYQVADDVEQLVKGKVAPKHREKFLGYAEVRQVFNITKTGKVAGCYVTEGLVKRGCGVRLLRDNVVIHEGELSQLKRFKDDVKEVARGYECGLSFAGYNDLREGDMVECY 910
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_DEHE1 (Translation initiation factor IF-2 OS=Dehalococcoides ethenogenes (strain 195) GN=infB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.285e-39 Identity = 81/196 (41.33%), Postives = 132/196 (67.35%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSG-RVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFN 591 +++LN+I+K DVQGS+E ++ +L+ L D + + G+I+ SDV LA+AS +I+GF+ + + AD + ++IR Y +IY L++D+ A++GLLE ++V G AEVRA+F S +AGCMV EGK++K +R++R G+ + +SLRR K++VKEV AG ECGVG D++D+++ DI+E ++ Sbjct: 393 IKELNIILKTDVQGSLEPIKDSLEKLSTDKIKININRSGVGNITESDVMLAMASGGLIIGFSTGIETNAQRLADAEDIDIRHYDIIYKLVEDVEKAVQGLLEPTIKEVIDGRAEVRAVFESTKKLSIAGCMVLEGKVLKNSQVRLLRGGEVIVDAPSNSLRRFKDDVKEVVAGYECGVGLKDFNDFQKSDILEFYH 588 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |