EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_CHLL2 (Translation initiation factor IF-2 OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=infB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.285e-39 Identity = 79/202 (39.11%), Postives = 132/202 (65.35%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++L++I+K D GSI+A+ L + + V ++ + Q G I+ +DV LA AS AII+GF V+ + K A+ + +++R Y VIY +++D+ A+EG+L + +GS EVR +F G V GC + EGK+ + +R++R+G ++ G LD+LRR K++VKEV+AG ECG+ +YDD + GDI+EA+ +++KR Sbjct: 749 MKELSMIIKADTDGSIQALADGLMKIQNEEVKVQIIHQGVGQITETDVLLAAASDAIIIGFRVRPNVNAKKLAEKEDLDVRFYSVIYHVLEDVEKALEGMLSPELHEESLGSLEVRQVFRVPKVGNVGGCYMLEGKVFRDSKVRLLREGVQIYDGQLDALRRFKDDVKEVDAGYECGISLKNYDDIKVGDIVEAYRIVEKKR 950
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BAUCH (Translation initiation factor IF-2 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=infB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.285e-39 Identity = 88/198 (44.44%), Postives = 123/198 (62.12%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSI 597 + +LN+I+K DVQGS+EA+ AL+ L + +K + G I+ +D LA AS AI++GFNV+A S + D + + I Y VIY LI+++ AM G+L +Q IG AEVR +FS G +AGCMV EG + + IRVIR+ ++ G L SLRR K++V EV G+ECG+G +Y D GDIIE F I Sbjct: 676 ILELNIILKTDVQGSVEAINDALEQLSTEKAKVKIIGSGVGGITETDATLAAASNAILIGFNVRADASARRIIDKENLNIHYYSVIYHLINEVTQAMNGMLTPEYKQDIIGLAEVRNVFSVPKFGLIAGCMVIEGIVKRHNNIRVIRNNIIIYEGELYSLRRFKDDVNEVRNGMECGIGVKNYTDIRTGDIIEVFKLI 873
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_STRMK (Translation initiation factor IF-2 OS=Stenotrophomonas maltophilia (strain K279a) GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 87/200 (43.50%), Postives = 125/200 (62.50%), Query Frame = 1 Query: 16 LNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 LN+++K DVQGS++A+ QAL L +++ + + G I+ SD + A ASKA ++GFNV+A S + ++ GV++R + +IYD+ID ++ GLL + IG AEVR +F SS G VAG MV EG + + IRV+RD + G L+SLRR KENV+EV G ECG+ Y+D + GD IE F I+ RT Sbjct: 681 LNLVIKADVQGSVQALSQALVALSNEDIRINVIHSGVGGITESDANSAAASKATVIGFNVRADASARRIIESNGVDLRYFSIIYDVIDQVKQVASGLLGVEIREEIIGIAEVRDVFRSSKLGAVAGSMVIEGVVRRNKPIRVLRDSVVIFEGELESLRRFKENVEEVRNGTECGIAVKAYNDVKPGDQIECFERIEVPRT 880
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_RHOP5 (Translation initiation factor IF-2 OS=Rhodopseudomonas palustris (strain BisA53) GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 86/201 (42.79%), Postives = 125/201 (62.19%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQR 603 ++ +I+K DVQGS+EA+ +L+ L + V + L G IS SDV LA A+ILGF+V+A A G+EIR Y +IYDL+DD++ AM GLL + +G+A + IF+ S G+VAGC V++G + +G +R+IRD VH G L +L+R K+ VKEV +G ECG+ +Y D GD+IE + +IQR Sbjct: 691 KEFPLIIKADVQGSLEAILGSLEKLGTEEVAARILHAGVGGISESDVTLAEGFNAVILGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDIKKAMSGLLAPTLRETMLGNALILEIFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFENYTDMRAGDVIECYRVETIQR 891
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_NITSB (Translation initiation factor IF-2 OS=Nitratiruptor sp. (strain SB155-2) GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 86/205 (41.95%), Postives = 133/205 (64.88%), Query Frame = 1 Query: 4 RVRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASK-AIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++++L VI+K D QGS+EA++ +L+ L + V + + G IS SDV LA AS+ A+ILGFNV+ G+VK A GV I+ Y +IYDLIDD++ + G+L + ++ IG AEVR F+ G VAGC+V++G + + RVIRDG ++ + SL+R KE+V+EV G ECG+ +++D + GD+IEA+ ++ T Sbjct: 638 QLKKLPVIIKADTQGSLEAIKGSLEKLKNEEVKVDIIHAGVGAISESDVTLADASENAVILGFNVRPTGAVKEKAKQLGVNIKTYSIIYDLIDDVKALLSGMLSPIIKEEVIGQAEVRETFNVPKIGTVAGCLVTDGVIERNAKARVIRDGVVIYDSKISSLKRFKEDVREVTKGYECGLMIENFNDIKVGDVIEAYKEVEEAAT 842
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_CAMC5 (Translation initiation factor IF-2 OS=Campylobacter curvus (strain 525.92) GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 85/202 (42.08%), Postives = 130/202 (64.36%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASK-AIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRK 606 ++ L VI+K DV GS+EA++ +L+ L + + + + G I+ SDV LA ASK +ILGFN++ G +K A GVEI+ Y VIY+LIDD++ + GL+ + + +G A+VR + + G +AGC+V+EG + +G IR+IRDG V+ G++ SL+R K++VKEV G ECGVG +D E D IE+F I+ + Sbjct: 699 LKTLPVIVKADVGGSLEALKASLEKLANNEIKVDIIHSGVGGITQSDVALASASKDCVILGFNIRPTGEIKEKAKESGVEIKTYNVIYNLIDDVKALLGGLMSPIIREEQLGQAQVRQVINVPKIGAIAGCLVTEGTINRGAKIRLIRDGVVVYEGMVSSLKRFKDDVKEVAKGYECGVGIEGCNDIRENDYIESFKEIEEQ 900
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BRAJA (Translation initiation factor IF-2 OS=Bradyrhizobium japonicum GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 86/201 (42.79%), Postives = 124/201 (61.69%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF--NSIQR 603 ++ +I+K DVQGS+EA+ +L+ L D V + L G IS SDV LA A I+GF+V+A A G+EIR Y +IYDL+DD++ AM GLL + +G+A + IF+ S G+VAGC V++G + +G +R+IRD VH G L +L+R K+ VKEV +G ECG+ +Y D GD+IE + +IQR Sbjct: 700 KEFPLIIKADVQGSLEAILGSLEKLGTDEVAARILHAGVGGISESDVTLAEGFNAAIIGFSVRANKEAAAAAKRNGIEIRYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNAAILEIFNISKVGKVAGCRVTDGTVERGANVRLIRDNVVVHEGKLSTLKRFKDEVKEVQSGQECGMAFENYHDMRAGDVIECYRVETIQR 900
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BORBU (Translation initiation factor IF-2 OS=Borrelia burgdorferi GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 86/203 (42.36%), Postives = 132/203 (65.02%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++L +I+K DVQGS+EA++ +L+ L D V ++ + + G I+ +D+ A AS AI++GF+V+ + AD + VEIR Y VIYD I+D+R+ +EG+LE EQ IG AEVRA+ + G +AGC VS G + + V+RDG +H G + SL+R K++VKEV ECG+ +Y + +EGDIIEAF + K++ Sbjct: 677 LKELKIILKADVQGSVEALKNSLEKLTNDEVRVRVVHSSAGVITETDISFASASDAIVIGFHVRPTAKAQVLADQEKVEIRKYNVIYDAINDVRSVLEGMLEPDVEQQFIGFAEVRAVINVPKIGVIAGCYVSRGLIKRDAITNVMRDGLQIHSGKISSLKRFKDDVKEVAEQYECGIMIDNYANIKEGDIIEAFEVKKVKKS 879
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BACFR (Translation initiation factor IF-2 OS=Bacteroides fragilis GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 85/202 (42.08%), Postives = 132/202 (65.35%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++LNVI+K DV GSIEA+ +L L + + + + +A G IS SDV LA AS AII+GF V+ S + +A+ +GV+IRLY VIY I++++ AMEG+L ++V + EVR +F + G VAG +V EGK+ + R+IRDG + G +++L+R K++VKEV ECG+ +Y+D + GD+IE + ++ K+T Sbjct: 813 QELNVIVKGDVDGSIEALSDSLIKLSTEQIQVNVIHKAVGQISESDVTLAAASDAIIIGFQVRPSASARKFAEQEGVDIRLYSVIYAAIEEVKAAMEGMLAPEVKEVVTATIEVREVFHITKVGTVAGAVVKEGKVKRSDKARLIRDGIVIFSGSINALKRFKDDVKEVGTNFECGISLVNYNDLKVGDMIETYEEVEVKQT 1014
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BACFN (Translation initiation factor IF-2 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 85/202 (42.08%), Postives = 132/202 (65.35%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 ++LNVI+K DV GSIEA+ +L L + + + + +A G IS SDV LA AS AII+GF V+ S + +A+ +GV+IRLY VIY I++++ AMEG+L ++V + EVR +F + G VAG +V EGK+ + R+IRDG + G +++L+R K++VKEV ECG+ +Y+D + GD+IE + ++ K+T Sbjct: 813 QELNVIVKGDVDGSIEALSDSLIKLSTEQIQVNVIHKAVGQISESDVTLAAASDAIIIGFQVRPSASARKFAEQEGVDIRLYSVIYAAIEEVKAAMEGMLAPEVKEVVTATIEVREVFHITKVGTVAGAVVKEGKVKRSDKARLIRDGIVIFSGSINALKRFKDDVKEVGTNFECGISLVNYNDLKVGDMIETYEEVEVKQT 1014 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |