EY660402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_AZOSE (Translation initiation factor IF-2 OS=Azoarcus sp. (strain EbN1) GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 88/203 (43.35%), Postives = 127/203 (62.56%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ QAL L D V + + A G IS SDV+LA AS A+I+GFN +A + A+ GV+IR Y +IYD +D+++ A+ G+L + IG EVR +F G VAGC V EG + +G +RV+R+ +H G L+SL+R K++VKEV G ECG+ +++D +EGD +E F + RT Sbjct: 742 VKTLPLIIKADVQGSQEALVQALNKLSTDEVRVNAIHSAVGAISESDVNLAQASGAVIIGFNTRADAGARKLAETFGVDIRYYNIIYDAVDEVKAALSGMLAPERRENVIGLVEVRQVFKVPKVGTVAGCYVLEGVVKRGSQVRVLRNHVVIHNGELESLKRFKDDVKEVKFGFECGLSIRNFNDVQEGDQLEVFEIQEIART 944
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_AZOSB (Translation initiation factor IF-2 OS=Azoarcus sp. (strain BH72) GN=infB PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39 Identity = 87/203 (42.86%), Postives = 130/203 (64.04%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ Q+L L D V + + A G IS SDV+LA AS A+I+GFN +A + A++ GV+IR Y +IYD +D++++A+ G+L + + IG E+R +F+ S G VAGC V EG + +G +R+IR+ V G L+SL+R K++VKEV G ECG+ +Y+D + GD +E F + RT Sbjct: 737 VKSLPLIIKADVQGSQEALAQSLAKLSNDEVRVNVIHGAVGAISESDVNLAQASGAVIIGFNTRADAGARKLAESFGVDIRYYNIIYDAVDEVKSALSGMLAPEKREEVIGMVEIRQVFTISKVGSVAGCYVLEGLVKRGSSVRLIRNHTVVWTGELESLKRFKDDVKEVKFGYECGLQLKNYNDIQVGDQLEVFEIKEVART 939
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_RALPJ (Translation initiation factor IF-2 OS=Ralstonia pickettii (strain 12J) GN=infB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.898e-39 Identity = 84/203 (41.38%), Postives = 128/203 (63.05%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V+ L +I+K DVQGS EA+ +L+ L D V ++ + A G I+ SDV+LA ASKA+I+GFN +A + A+N G++IR Y +IYD +D+++ AM G+L + + G EVR +F G VAGCMV +G + + +RV+R + G LDSL+R K++VKEV G ECG+ +++D +EGD +E + + RT Sbjct: 761 VKSLPLIIKADVQGSQEALVHSLKKLSTDEVRVQIVHAAVGGITESDVNLATASKAVIIGFNTRADAGARKLAENHGIDIRYYNIIYDAVDEVKAAMSGMLSPEKREETTGLVEVRQVFHVPKVGAVAGCMVLDGFVKRNSLVRVLRANVVIFSGELDSLKRFKDDVKEVKQGFECGLSIKNFNDVQEGDQLEVYEITEVART 963
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_DICNV (Translation initiation factor IF-2 OS=Dichelobacter nodosus (strain VCS1703A) GN=infB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.898e-39 Identity = 85/202 (42.08%), Postives = 130/202 (64.36%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 + ++++++K DVQGS+EA+ +L+ L D V + + G I+ SDV LA+AS A I+ FNV+A + K + +G ++R Y +IY IDD++ AM+GLL + IG AEVR +F SS G VAGC+V +G L + IRV+R+ ++ G L+SLRR K++V EV AG ECG+G +Y+D GD IE + ++ +R Sbjct: 676 ISKVSLMIKADVQGSVEALADSLRELSTDEVAVNIIATGIGGITESDVQLALASSATIIAFNVRAEANAKKLIEEEGGDLRYYSIIYQAIDDVKAAMQGLLSPEIREEIIGLAEVRDVFRSSKFGAVAGCIVEDGLLKRHNPIRVLRNNVVIYEGELESLRRFKDDVNEVRAGTECGLGVKNYNDVRVGDQIECYERVEIER 877
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_ACIC1 (Translation initiation factor IF-2 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=infB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.898e-39 Identity = 88/205 (42.93%), Postives = 133/205 (64.88%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQAL-QVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIF-SSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGV-LDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 V +L +I+K DV GS+EA+ AL ++ D ++ + + G I+ ++V LAVAS AII+GFNV+ G + A+ +GV++R Y VIY I+D+ A++GLL+ V E+V +G+AEVR +F SS G +AGC+V G + +G RV+RDG V V + SLRR K++V EV G ECGVG ++D GD+IE + ++ R+ Sbjct: 675 VAELRLILKGDVSGSVEALEDALLKIDVGDEARIRVIDRGVGAITENNVMLAVASDAIIIGFNVRPEGKARELAEREGVDVRYYSVIYQAIEDVEAALKGLLKPVYEEVQLGTAEVREVFRSSKFGNIAGCLVRSGTITRGAKARVVRDGVVVANDVSIASLRRFKDDVTEVREGFECGVGLGSFNDIRVGDVIETYEMREKPRS 879
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_RHOBA (Translation initiation factor IF-2 OS=Rhodopirellula baltica GN=infB PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.091e-39 Identity = 84/193 (43.52%), Postives = 127/193 (65.80%), Query Frame = 1 Query: 13 QLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF 588 +LN+I++ D +GS+EA+ + L V ++ L ++ G IS +D LA AS A+ILGFNV ++ A+ +GVEIR Y VIY L DD+R +EG L+ E V +G A V+ +FS S G +AGC V++G + + C IRV RDG+T+ LD+LRR+KE+VKEV G+ECG+ ++D ++ D++EA+ Sbjct: 836 KLNLIIRADARGSLEAIDKELSKFDHPEVEIRVLQRSVGGISLADATLASASDAVILGFNVIPDDKARSLAEERGVEIRRYDVIYKLTDDIRALIEGRLKPEERVVELGRALVKQVFSISRVGTIAGCYVAQGSIQRNCRIRVNRDGRTIGDYQLDTLRRIKEDVKEVPRGMECGIRLQGFNDIKQDDVLEAY 1028
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_PELPB (Translation initiation factor IF-2 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=infB PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.091e-39 Identity = 79/202 (39.11%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKR 609 +++L+VI+K D GSI+A+ L + + V ++ + Q G I+ +DV LA AS AII+GF V+ + K A+ + +++R Y VIY +++D+ A+EG+L + +GS E+R IF G V GC + EGK+ + +R++RDG ++ G L +L+R K++VKEV+AG ECG+ +YDD + GDI+EA+ +++KR Sbjct: 783 MKELSVIIKADTDGSIQALADGLMKIQNEEVKVQIIHQGVGQITETDVLLAAASDAIIIGFRVRPNVNAKKLAEKEDLDVRFYSVIYHVLEDVEKALEGMLSPELHEESLGSLEIRQIFKVPKIGNVGGCYMLEGKMFRDSKVRLLRDGVQIYEGQLAALKRFKDDVKEVDAGYECGMSLKNYDDIKVGDIVEAYKIVEKKR 984
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_CELJU (Translation initiation factor IF-2 OS=Cellvibrio japonicus (strain Ueda107) GN=infB PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.091e-39 Identity = 83/194 (42.78%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF 588 + L V++K DV+GS+EA++ +L + D V + + G I+ +DV+LAV S AII+GFNV+A G+ + A+ +GV+IR Y +IY L+D+++ A+ G+L+ + +G A VR +F+S G+VAGCMV EG + + IRV+RD + G L+SLRR K++V EV G ECG+G +Y D + GD IE + Sbjct: 729 KTLTVVIKADVRGSLEAIQASLADIGNDEVQVNVISSGIGGITENDVNLAVTSGAIIVGFNVRADGATRRLAETEGVDIRYYSIIYQLLDEVKAALSGMLDPERVETIVGIANVREVFNSPKFGQVAGCMVVEGTVYRNKPIRVLRDNVVIFTGELESLRRFKDDVNEVRNGFECGIGVKNY-DVKVGDQIEVY 921
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_BORGA (Translation initiation factor IF-2 OS=Borrelia garinii GN=infB PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 5.091e-39 Identity = 86/203 (42.36%), Postives = 131/203 (64.53%), Query Frame = 1 Query: 7 VRQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGS-GRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAFNSIQRKRT 612 +++L +I+K DVQGS+EA++ +L+ L D V ++ + + G I+ +D+ A AS AI++GF+V+ + AD + VEIR Y VIYD I D+++ +EG+LE EQ IG AEVRA+ + G +AGC VS G + + V+RDG +H G + SL+R K++VKEV ECG+ +Y + +EGDIIEAF + K+T Sbjct: 678 LKELKIILKADVQGSVEALKNSLEKLTNDEVRVRVVHSSAGVITETDISFASASDAIVIGFHVRPTSKAQILADQEKVEIRKYNVIYDAISDVKSVLEGMLEPDVEQQFIGFAEVRAVINVPKVGVIAGCYVSRGIIKRDAITNVMRDGLQIHSGKISSLKRFKDDVKEVAEQYECGIMIDNYANIKEGDIIEAFEVKKIKKT 880
BLAST of EY660402 vs. ExPASy Swiss-Prot
Match: IF2_MAGSA (Translation initiation factor IF-2 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=infB PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.649e-39 Identity = 78/194 (40.21%), Postives = 125/194 (64.43%), Query Frame = 1 Query: 10 RQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFS-SGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDWEEGDIIEAF 588 ++L V++K DVQGSIEA+ L+ + +NV ++ L A G I+ SD+ LA AS +++GFNV+A + A GV+IR Y +IYD+ DD++ + G+L + +G A +R +F+ + G+VAGCM++EG + +G +R++RD +H G L L+R K++VK+V G ECG+ +Y+D GD+IE F Sbjct: 670 QELPVVIKGDVQGSIEAISSTLEKMGNENVKVRILHAAVGAINESDITLAKASNGLLIGFNVRANPQARDMARRDGVDIRYYSIIYDVTDDLKKMLSGMLAPELREKFLGYASIREVFNITKVGKVAGCMITEGTVKRGAKVRLLRDNVVIHTGDLGQLKRFKDDVKDVREGYECGMSFTNYEDIRVGDVIECF 863 The following BLAST results are available for this feature:
BLAST of EY660402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660402 ID=EY660402; Name=EY660402; organism=Citrus sinensis; type=EST; length=912bpback to top |