EY660400

Overview
NameEY660400
Unique NameEY660400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY660400_ssr243 microsatellite EY660400_ssr243:243..254. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10901 contig Csv1_Contig10901:140..1008. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.934e-41
Identity = 90/187 (48.13%), Postives = 119/187 (63.64%), Query Frame = 3
Query:  285 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            +K+AINGFGRIGRN +R  +     + +++VAIN+    +  +HLLKYD++ G F   VK +G D ISV G  I +    NP  LPW  LG+D+V+E TGV+  RE A  H+ AGAKKVL + P   D+  T V G+N D  KP+  I+SN SCTTNC+ P +KVLD  FGI  G +TT H+   DQ
Sbjct:    3 IKLAINGFGRIGRNIVRALYESGLSNEIKIVAINELADPEAIAHLLKYDTSHGRFFFPVK-LGEDTISVAGDAIALFCEPNPAELPWKTLGVDVVLECTGVYHSREHAQLHLTAGAKKVLFSHPADNDVDATIVYGINDDELKPEHTIVSNGSCTTNCVVPVIKVLDDAFGIESGAITTIHASMNDQ 188          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 3.832e-41
Identity = 91/185 (49.19%), Postives = 122/185 (65.95%), Query Frame = 3
Query:  288 KVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            KV INGFGRIGR   R  +  +   +++VA+ND    V  A+++LKYDST G F   V+  G   I V+GK I+  + R+P  +PW + G + V+E TGVF  +E A  H++ GAKKV+I+AP   D P +V+GVN D Y  D  ++SNASCTTNCLAP  KV++ KFGI++G MTT HSYT  Q
Sbjct:    5 KVGINGFGRIGRIVFR--NAIEHEGVDIVAVNDPFIEVHYAAYMLKYDSTHGRFNGTVEFDGNTLI-VNGKKIKFYAERDPAQIPWSETGAEYVVESTGVFTKQEKASLHLKGGAKKVIISAPSS-DSPMFVMGVNNDQYTKDITVLSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHSYTATQ 185          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3P_BACFR (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacteroides fragilis GN=gap PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.832e-41
Identity = 89/185 (48.11%), Postives = 119/185 (64.32%), Query Frame = 3
Query:  285 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            +KV INGFGRIGR   R       + +++V IND    +  +++LKYDS  G FE +V  V    + V+G  I++ +  +P NL W ++  D+V+E TG F+  E A KHIQAGAKKV+++AP K   P +V GVN  +Y   + IISNASCTTNCLAP  KVL+ KFGI+KG MTT H+ T  Q
Sbjct:    2 IKVGINGFGRIGRMVFRAAVKNFGNDIQIVGINDLLDAEYLAYMLKYDSVHGRFEGEVA-VEDGALIVNGNKIRLTAEMDPANLKWNEVDADVVVESTGFFLTDETARKHIQAGAKKVIMSAPSKDSTPMFVYGVNHTSY-AGQDIISNASCTTNCLAPIAKVLNDKFGIVKGLMTTVHAATATQ 184          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.832e-41
Identity = 95/186 (51.08%), Postives = 122/186 (65.59%), Query Frame = 3
Query:  285 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            +++AINGFGRIGR  LR    RK+  +EVVAIND    V  A+++ KYDST G F+ +V   G   + +DGK + V   R+P  LPWG   ID+ I+ TG+F + + A KHI AGAKKV+ITAP     P +VVGVN D Y   + I+SNASCTTNCLAP  K+++  FGI +G MTT HS T  Q
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKN--IEVVAINDPFITVDYAAYMFKYDSTHGRFDGEVSHDGK-ALIIDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAP-SSTAPMFVVGVNEDKY-AGQTIVSNASCTTNCLAPLAKIINNAFGIEEGLMTTVHSITATQ 182          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.832e-41
Identity = 96/186 (51.61%), Postives = 122/186 (65.59%), Query Frame = 3
Query:  285 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            +++AINGFGRIGR  LR    RK+  +EVVAIND    V  A+++ KYDST G F+ +V   G   I +DGK + V   R+P  LPWG   ID+ I+ TG+F + + A KHI AGAKKV+ITAP     P +VVGVN D Y   + I+SNASCTTNCLAP  K+++  FGI +G MTT HS T  Q
Sbjct:    2 VRIAINGFGRIGRLVLRIALSRKN--IEVVAINDPFITVDYAAYMFKYDSTHGRFDGEVSHDGKSLI-IDGKKVLVFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAP-SSTAPMFVVGVNEDKY-AGQTIVSNASCTTNCLAPLAKIINNAFGIEEGLMTTVHSITATQ 182          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.005e-41
Identity = 88/186 (47.31%), Postives = 123/186 (66.13%), Query Frame = 3
Query:  285 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            +KV INGFGRIGR   R  +  + + +E+VA+ND       A+++LKYDS  G F+ D+K  G D ++++GK I+  + ++P N+PW + G   V+E TGVF   + A  H++ GAKKV+I+AP   D P +V+GVN + Y  D  ++SNASCTTNCLAP  KV+  KF II+G MTT HSYT  Q
Sbjct:    3 VKVGINGFGRIGRIVFR--NAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSQHGQFKGDIKVEGND-LTINGKTIRFYTEKDPANIPWSETGAYYVVESTGVFTTTDKAKAHLKGGAKKVVISAPS-ADAPMFVMGVNNETYTKDIEVLSNASCTTNCLAPLAKVIHDKFTIIEGLMTTVHSYTATQ 184          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.537e-41
Identity = 91/186 (48.92%), Postives = 119/186 (63.98%), Query Frame = 3
Query:  285 LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            +KV INGFGRIGR   R  H   D  +E+VA+ND       A+++LKYDS  G F+ DV   G+D + V GK ++  + R+P  +PW + G D ++E TGVF   E A  H++ GAKKV+I+AP   D P YV+GVN   Y     +ISNASCTTNCLAP  KV++ +F II+G MTT HSYT  Q
Sbjct:    3 VKVGINGFGRIGRIVFRNAHEHSD--VEIVAVNDPFIEPHYAAYMLKYDSQHGNFKGDVTVEGSD-LVVGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPS-ADAPMYVMGVNEKTYDGSGMVISNASCTTNCLAPLAKVINDEFKIIEGLMTTVHSYTATQ 184          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.537e-41
Identity = 94/195 (48.21%), Postives = 123/195 (63.08%), Query Frame = 3
Query:  267 VAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIF---EADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            + +  K+K+ INGFGRIGR   R    R D  +E+V +ND        S++ KYDS  G +   E +VK   T  +    K + V   RNP  +PWG++G + V+E TGVF D+E A  H++AGAKKV+I+AP K D P +VVGVN   YK D  I+SNASCTTNCLAP  KV++ KFGI++G MTT HS T  Q
Sbjct:    1 MGSTGKIKIGINGFGRIGRLVARVALTRDD--IELVGVNDPFISTDYMSYMFKYDSVHGKWKHHEVNVKDSKT--LLFGEKSVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKEKASAHLKAGAKKVVISAPSK-DAPMFVVGVNEHQYKSDVNIVSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHSITATQ 190          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.537e-41
Identity = 91/189 (48.15%), Postives = 121/189 (64.02%), Query Frame = 3
Query:  279 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDG-KVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            AK+K+ INGFGRIGR   R    R D  +E+VA+ND    V+  +++ KYDS  G ++        D   + G K + V   RNP  +PWG+ G D V+E TGVF D++ A  H++ GAKKV+I+AP K D P +VVGVN   YK D  ++SNASCTTNCLAP  KV++ +FGI++G MTT HS T  Q
Sbjct:    2 AKIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISVEYMTYMFKYDSVHGQWKHHELKAKDDKTLLFGEKPVTVFGIRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEKEYKSDLTVVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSMTATQ 187          
BLAST of EY660400 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 6.537e-41
Identity = 89/188 (47.34%), Postives = 122/188 (64.89%), Query Frame = 3
Query:  279 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGNMTTTHSYTGDQ 839
            A +KV INGFGRIGR   R  +  +   +EVVA+ND       A+++LKYDS+ G+F+ +V+  G D + V+GK ++  + RNP ++ W + G + V+E TGVF   E A  H+  GAKKV+I+AP   D P YV+GVN   Y     +ISNASCTTNCLAP  KV++  +GI++G MTT HSYT  Q
Sbjct:    2 APIKVGINGFGRIGRIVFR--NAVEHPDIEVVAVNDPFIETTYAAYMLKYDSSHGLFKGEVEVDGKD-LVVNGKKVRFYTERNPADIKWSETGAEYVVESTGVFTTTEKAKAHLVGGAKKVIISAPS-ADAPMYVMGVNESDYDGSADVISNASCTTNCLAPLAKVINDNYGIVEGLMTTVHSYTATQ 185          
The following BLAST results are available for this feature:
BLAST of EY660400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
E4PD_PSEHT2.934e-4148.13D-erythrose-4-phosphate dehydrogenase OS=Pseudoalt... [more]
G3P_MONAN3.832e-4149.19Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_BACFR3.832e-4148.11Glyceraldehyde-3-phosphate dehydrogenase OS=Bacter... [more]
G3P3_KLUMA3.832e-4151.08Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_KLUMA3.832e-4151.61Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_PHANO5.005e-4147.31Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P_CRYPA6.537e-4148.92Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3PC_PINSY6.537e-4148.21Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PETHY6.537e-4148.15Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P2_TRIKO6.537e-4147.34Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660400 ID=EY660400; Name=EY660400; organism=Citrus sinensis; type=EST; length=869bp
CACGCGTCCGCTTGTCTTTGCCCAGCTTAGCTTAGCCACCACTGCTTGCT
CTTGCTTGCATCATCCAGCAAATACCTATCATGGCTTCGGCCACTCTCTC
TGTAGCCAAATCAGCTCTTCAGGGAAATGGTAAGGGATTCTCAGAATTCT
CAGGTCTACGCAACTCTGCAAGCCTTCCTTTTGGCAGGAAATCTTCTGAT
GACTTCCATTCAGTCATTGCTCTCCAGACCTCTGCTCTAGGAAGCAGCAG
CAGCGGGTACAGGAAGGTTGCTGCTCAGGCAAAGCTGAAGGTTGCAATCA
ATGGGTTTGGTAGAATTGGTAGGAACTTCTTGAGGTGCTGGCACGGCCGC
AAGGACTCTCCACTTGAAGTCGTTGCCATCAATGACACCGGAGGTGTCAA
GCAGGCCTCTCACCTCCTCAAGTACGACTCCACCCTCGGCATCTTTGAAG
CCGATGTTAAACCAGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTC
ATCCAGGTTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTT
GGGCATCGACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGG
GTGCGGGCAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCC
CCCGGCAAGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGC
TTACAAACCAGATGAGCCCATCATCAGCAATGCTTCTTGCACAACCAACT
GCCTTGCCCCATTCGTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAG
GGGAACATGACCACCACACACTCGTACACTGGCGACCAAGACTACTCGAT
GCTAGCCACGCGGACTCAN
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