EY660399

Overview
NameEY660399
Unique NameEY660399
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY660399 vs. ExPASy Swiss-Prot
Match: LAR_DESUN (Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.411e-52
Identity = 106/236 (44.92%), Postives = 152/236 (64.41%), Query Frame = 1 
Query:   91 SKSKILFIGGTGYIGKFIVEASAKAGHPTFVLVRESTLSDPSKSQLLDHFKKLGVNLVIGDVLNHESLVKAIKQ--VDVVISTVGHTLLGDQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFATKAKIRRAVEAEGIPYTYVASNFFAAYFLPNLSQPGATAPPRDKVVILGDGNPKAVYNKEDDIGTYTIKAVDDPRTLNKILYIKPPGNIYSFNDLVSLWERKIGK 792
            +K++ L +GGTG+IG+FI +AS   G+PTF+LVR   +S PSK+ ++  F+  G  ++ G + + E + K +K+  +DVVIS VG   L DQ+ ++ AIK    IKRF PSEFG+DVDR   VEP  + +  K  +RRAVE  GIP+T +  N  A++   +   P    PP D+  I GDGN KA +   +DIG +T+K +DD RTLNK ++ +P  N YS N+L SLWE+KIG+
Sbjct:   11 TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVS-PSKAVIIKTFQDKGAKVIYGVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFLPSEFGHDVDRTDPVEPGLTMYKEKRLVRRAVEEYGIPFTNICCNSIASWPYYDNCHPSQVPPPMDQFQIYGDGNTKAYFIDGNDIGKFTMKTIDDIRTLNKNVHFRPSSNCYSINELASLWEKKIGR 245
The following BLAST results are available for this feature:
BLAST of EY660399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LAR_DESUN6.411e-5244.92Leucoanthocyanidin reductase OS=Desmodium uncinatu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-G08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660399 ID=EY660399; Name=EY660399; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGATTTGATCATTTCAAAACAAAACAGAAAAAAAAAGGAAA
GAATCCCCGAAATTGAACTGAATAATTCTCGGTAATGGCGTCGAAAAGCA
AGATTCTATTCATCGGCGGTACAGGGTACATCGGCAAATTCATCGTCGAA
GCGAGCGCGAAAGCCGGCCACCCGACGTTCGTGCTCGTGAGAGAATCCAC
ACTCTCCGATCCTTCCAAATCTCAGCTCCTCGATCACTTCAAAAAACTCG
GCGTCAATCTCGTCATCGGAGATGTGTTGAATCACGAGAGCTTGGTGAAG
GCGATAAAACAAGTGGACGTGGTGATATCAACGGTCGGTCACACTTTATT
AGGTGATCAGGTCAAGATTATTGCGGCCATTAAAGAAGCTGGTAACATTA
AGAGATTCTTCCCTTCAGAATTTGGGAATGATGTTGATCGAGTCCATGCC
GTTGAGCCAGCAAAATCAGCATTTGCCACAAAGGCAAAAATCCGCCGAGC
CGTTGAGGCTGAAGGGATTCCGTATACTTATGTAGCGTCGAATTTCTTTG
CTGCTTACTTCCTTCCCAATTTGTCGCAGCCCGGGGCCACTGCCCCACCT
AGGGATAAAGTTGTCATCTTAGGCGATGGAAATCCAAAAGCTGTTTATAA
CAAGGAAGATGATATTGGAACCTATACTATCAAAGCGGTTGATGATCCCA
GAACCTTGAACAAAATCCTTTACATTAAACCCCCTGGTAATATTTACTCA
TTCAATGATCTTGTGTCCTTGTGGGAGAGAAAGATTGGCAAACCCTCCAA
GGGTGTACGTTCCGGAGGAGCAAGTCTAAAGATATCAAGAAGCTGCACTC
CAGTCATGTGATATATCATTCAGCCT
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