EY660354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660354 vs. ExPASy Swiss-Prot
Match: LAX1_ARATH (Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 7.104e-81 Identity = 162/270 (60.00%), Postives = 179/270 (66.30%), Query Frame = 1 Query: 118 ETVVAGNYIEMEREEEDXXXXXXXXXX---FFWHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKV-DFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLLHGQG*GGEALRPHQNGSLFYRSY*HSLHLLRTCCHSGDHACXVE-------ATKIKSIYLLA 894 E VAG +E EED F WHGGS +DAWFSCASNQVAQVLLTLPY MGSWTAYLIS+LYVEYR R E+++ F+NHVIQWFEVLDGLLG +W+ GL FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MT++TAWYLTIAS LHGQ G H + + + ++L T G HA VE K KSIYL+A Sbjct: 16 EDEVAGRKVEDSAAEEDIDGNGGNGFSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISVLYVEYRARMEKQEAKSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIASFLHGQAEG----VTHSGPTKLVLYFTGATNILYT---FGGHAVTVEIMHAMWKPRKFKSIYLMA 278 HSP 2 Score: 88.1965 bits (217), Expect = 7.199e-17 Identity = 43/64 (67.19%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 725 FCMDRGEGVKHSGPTKMVLYFTGATNILYTFCGHAVTVEIMHAMWKPQKSSXFTCWHTXWVTLL 916 F + EGV HSGPTK+VLYFTGATNILYTF GHAVTVEIMHAMWKP+K T +V L Sbjct: 222 FLHGQAEGVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPRKFKSIYLMATLYVFTL 285
BLAST of EY660354 vs. ExPASy Swiss-Prot
Match: LAX1_ORYSJ (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2) HSP 1 Score: 299.671 bits (766), Expect = 1.583e-80 Identity = 155/237 (65.40%), Postives = 171/237 (72.15%), Query Frame = 1 Query: 205 WHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLLHGQG*GGEALRPHQNGSLFYRSY*HSLHLLRTCCHSGDHACXVE-------ATKIKSIYLLA 894 WHGGSV+DAWFSCASNQVAQVLLTLPY MGSWTAYLIS+LYVEYR+RKE+E V F+NHVIQWFEVLDGLLG +W+ GL FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGL MT++TAWYL IA+LL+GQ G H + + + ++L T G HA VE K K IYLLA Sbjct: 51 WHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALLNGQAEG----ITHTGPTKLVLYFTGATNILYT---FGGHAVTVEIMHAMWKPAKFKYIYLLA 280 HSP 2 Score: 84.7297 bits (208), Expect = 7.959e-16 Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 2 Query: 737 RGEGVKHSGPTKMVLYFTGATNILYTFCGHAVTVEIMHAMWKPQKSSXFTCWHTXWVTLL 916 + EG+ H+GPTK+VLYFTGATNILYTF GHAVTVEIMHAMWKP K T +V L Sbjct: 228 QAEGITHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPAKFKYIYLLATLYVFTL 287
BLAST of EY660354 vs. ExPASy Swiss-Prot
Match: LAX2_ORYSJ (Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 1.340e-79 Identity = 153/237 (64.56%), Postives = 169/237 (71.31%), Query Frame = 1 Query: 205 WHGGSVYDAWFSCASNQVAQVLLTLPYXXXXXXXXXXXXXXXXXXXMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLIMTSFTAWYLTIASLLHGQG*GGEALRPHQNGSLFYRSY*HSLHLLRTCCHSGDHACXVE-------ATKIKSIYLLA 894 WHGGSV+DAWFSCASNQVAQVLLTLPY MGSWTAYLIS+LYVEYR RKE+E V F+NHVIQWFEVLDGLLG +W+ GL FNCTFLLFGSVIQLIACASNIYYIND LDKRTWTYIFGACC+TTVFIPSFHNYRIWSFLGL MT++TAWYL IA+ +HGQ G H S + + ++L T G HA VE K K IYL+A Sbjct: 42 WHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNHVIQWFEVLDGLLGPYWKAAGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCSTTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAAVHGQVDG----VTHSGPSKMVLYFTGATNILYT---FGGHAVTVEIMHAMWKPQKFKYIYLVA 271 The following BLAST results are available for this feature:
BLAST of EY660354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660354 ID=EY660354; Name=EY660354; organism=Citrus sinensis; type=EST; length=924bpback to top |