EY660353

Overview
NameEY660353
Unique NameEY660353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1076 contig Csv1_Contig1076:4..828. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECOL5 (Iron-binding protein iscA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECOK1 (Iron-binding protein iscA OS=Escherichia coli O1:K1 / APEC GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECODH (Iron-binding protein iscA OS=Escherichia coli (strain K12 / DH10B) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECOBW (Iron-binding protein iscA OS=Escherichia coli (strain K12 / BW2952) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECO8A (Iron-binding protein iscA OS=Escherichia coli O8 (strain IAI1) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECO81 (Iron-binding protein iscA OS=Escherichia coli O81 (strain ED1a) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECO7I (Iron-binding protein iscA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECO57 (Iron-binding protein iscA OS=Escherichia coli O157:H7 GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECO55 (Iron-binding protein iscA OS=Escherichia coli (strain 55989 / EAEC) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of EY660353 vs. ExPASy Swiss-Prot
Match: ISCA_ECO45 (Iron-binding protein iscA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.700e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  138 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 446
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
The following BLAST results are available for this feature:
BLAST of EY660353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 327
Match NameE-valueIdentityDescription
ISCA_ECOL53.700e-2248.08Iron-binding protein iscA OS=Escherichia coli O6:K... [more]
ISCA_ECOK13.700e-2248.08Iron-binding protein iscA OS=Escherichia coli O1:K... [more]
ISCA_ECODH3.700e-2248.08Iron-binding protein iscA OS=Escherichia coli (str... [more]
ISCA_ECOBW3.700e-2248.08Iron-binding protein iscA OS=Escherichia coli (str... [more]
ISCA_ECO8A3.700e-2248.08Iron-binding protein iscA OS=Escherichia coli O8 (... [more]
ISCA_ECO813.700e-2248.08Iron-binding protein iscA OS=Escherichia coli O81 ... [more]
ISCA_ECO7I3.700e-2248.08Iron-binding protein iscA OS=Escherichia coli O7:K... [more]
ISCA_ECO573.700e-2248.08Iron-binding protein iscA OS=Escherichia coli O157... [more]
ISCA_ECO553.700e-2248.08Iron-binding protein iscA OS=Escherichia coli (str... [more]
ISCA_ECO453.700e-2248.08Iron-binding protein iscA OS=Escherichia coli O45:... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660353 ID=EY660353; Name=EY660353; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGATTTTCTTTTTTCTGAAAAAAAAAGGAAATTAAATAGAA
AAAGATTGCGTGACATTTTGGATATGATCGATGGCTTCGTTTCTGGCGCA
AGCCGCTGAGAAAATCGGACCGGCCGTTAGGCGGCAGGCCGTGACGTTAA
CAGACTCCGCCGCCTCTAGAGTACGTCACCTCCTCCAGCAACGCCAGCGA
CCTTACCTCAAGCTCGGCGTCAAGGCCCGTGGCTGCAACGGCTTGTCCTA
CACCCTCAATTACGCCGATGAGAGAGCTAAGTTTGATGAGTTGGTTGAGG
ATAAGGGTGTGAAGATACTGATTGATCCAAAAGCTCTCATGCATGTTATT
GGGACCAAAATGGATTTTGTAGACGATAAGCTCAGGTCTGAGTTTGTATT
CATTAATCCAAACTCTAAAGGGCAGTGTGGATGTGGTGAATCCTTTATGA
CAACCAGCAGTAGTGGAGCGTCTAAGCAGGGTGGAAGCTAGGGTTTCTTA
CAAACTAATATTACATGAAGAATGAATGTAGATGATTCTTTTCCCTGGCT
GACCAAGCATTATGCGCTTGTCTGAAGGTTGTGAATGAAAGGTAGACATC
CTCGGTGAGCTTTAATGGCAGTTGGAGCAACAGGGACTTTACTAATTCTC
GTCCTTCTGGGAATCACTGCAGTTTTGCCGTCTACGAACAAATTTGTAAA
ACTATTGTAGCATTTTCTTCCTGGTTTTTGACAAAATACCTCTGTAACCT
GATTATGTGATTCTTATTGTAATTTGGTTCAGTTCAGAAATGACTTTAAT
AATATTTTAATATAAAAAAAAAAAAAA
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