EY660349

Overview
NameEY660349
Unique NameEY660349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_SHIBS (Glycogen synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOSM (Glycogen synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOSE (Glycogen synthase OS=Escherichia coli (strain SE11) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLU (Glycogen synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLI (Glycogen synthase OS=Escherichia coli (strain K12) GN=glgA PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLC (Glycogen synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL6 (Glycogen synthase OS=Escherichia coli O6 GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL5 (Glycogen synthase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOK1 (Glycogen synthase OS=Escherichia coli O1:K1 / APEC GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
[Close]
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECOHS (Glycogen synthase OS=Escherichia coli O9:H4 (strain HS) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2 
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249
The following BLAST results are available for this feature:
BLAST of EY660349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
GLGA_SHIBS1.201e-1232.54Glycogen synthase OS=Shigella boydii serotype 4 (s... [more]
GLGA_ECOSM1.201e-1232.54Glycogen synthase OS=Escherichia coli (strain SMS-... [more]
GLGA_ECOSE1.201e-1232.54Glycogen synthase OS=Escherichia coli (strain SE11... [more]
GLGA_ECOLU1.201e-1232.54Glycogen synthase OS=Escherichia coli O17:K52:H18 ... [more]
GLGA_ECOLI1.201e-1232.54Glycogen synthase OS=Escherichia coli (strain K12)... [more]
GLGA_ECOLC1.201e-1232.54Glycogen synthase OS=Escherichia coli (strain ATCC... [more]
GLGA_ECOL61.201e-1232.54Glycogen synthase OS=Escherichia coli O6 GN=glgA P... [more]
GLGA_ECOL51.201e-1232.54Glycogen synthase OS=Escherichia coli O6:K15:H31 (... [more]
GLGA_ECOK11.201e-1232.54Glycogen synthase OS=Escherichia coli O1:K1 / APEC... [more]
GLGA_ECOHS1.201e-1232.54Glycogen synthase OS=Escherichia coli O9:H4 (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660349 ID=EY660349; Name=EY660349; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTTGTTCTGG
TGAAGAACAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTA
ANGGAATTGTGAACGGGATGGATGTCCAGGAGTGAACCCCTTGACTGACA
ATATATAGGTGTCAATATGATGCTTCACTGTGATGGATGCGAAGCTCTTC
TGAGGAAGCCCTCCAGCAGAAAGTGGGTGCCTGTCGATAGAATATTCTGT
CATAGGCTCATTGGTAGACTGAAGAGCAGAAGGCTCGATATTCTTGAGCT
GCATTCCCATTTCTCAAGAGATGTCAGATATAGTCCTGGACTGGCAAAAA
CCATGGAGAGCAGCTTGACAAGTTGAGAACTGTACCTGAGAAAGCAGAGA
GTACGAATTCATATTCTCTGCGCTATGAAAT
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