EY660349

Overview
NameEY660349
Unique NameEY660349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ECO24 (Glycogen synthase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMASGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_DESRM (Glycogen synthase OS=Desulfotomaculum reducens (strain MI-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 50/170 (29.41%), Postives = 88/170 (51.76%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIR--KTGIXGIVNGMDV 526
            ++D+  RF+   +A LE    ++   N           +   +DWHT +I  +LK+ Y+    Y+  + VF IHN+ YQG F       +L L  ++    D ++ Y       ++++MK G+  SD++ TVS  YA+E+    + G +LD ++R  K  + GI+NG+D+
Sbjct:  101 FEDDAERFAFFDRAILEVLPRIDFQPN-----------IIHCHDWHTGMISTFLKSHYRNNPFYQDIRTVFTIHNLQYQGVFPRTILQNVLGLGNEY-FGLDGLEFYG------QVSFMKGGVNYSDILTTVSETYAEEI-QLPQYGEQLDGLLRHQKRKLHGILNGIDI 251          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA2_AGRT5 (Glycogen synthase 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA2 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 63/207 (30.43%), Postives = 104/207 (50.24%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQE*TP*LTIY-RCQYDASL*WMRSSSEEALQQKVG 628
            GE + DN LRF++L + A E    + L +       +  DVV V +DWH +L   YL           S   V  +HN+A+QG++  E  G+L LP+    + D ++ Y+       ++++K G+  +  V TVSP YA+E+ +  E G+ +  ++  R+  + GIVNG+D     P    Y    + A+    RS ++ AL Q +G
Sbjct:   99 GEPFADNDLRFAVLSKVAAE----IALGA----IDGWQPDVVHV-HDWHAALTCVYLADSTP------SVASVLTLHNLAFQGQYPLERAGMLGLPSHL-CTVDCLEYYD------DMSFLKGGLTTASAVTTVSPTYAREILT-PEMGMGMHGVLARRRGDLRGIVNGVDHDVWNPATDPYILANFTAATATRRSLNKYALLQALG 282          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_RHITR (Glycogen synthase OS=Rhizobium tropici GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12
Identity = 59/176 (33.52%), Postives = 90/176 (51.14%), Query Frame = 2
Query:    2 HASGTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMD 523
            +   TG+DY DN  RF+ L  A  E    L           +  D+V  A+DW ++L+P Y++  Y P     S   V  IHNIA+QG+F  + F  L LPA    S + I+ Y        + ++K G+  +  + TVSP YA+E+ +  E G+ L+ +I  +   + GIVNG+D
Sbjct:   96 YVDATGKDYPDNWRRFAALSLAGAEIAAGLLPG--------WRPDLVH-AHDWQSALVPVYMR--YYPTPELPS---VLTIHNIAFQGQFGADIFPGLRLPAH-AFSVEGIEYYG------DVGFLKGGLQTAHALTTVSPSYAEEILT-PEFGMGLEGVIASKAYNLYGIVNGID 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_EUBE2 (Glycogen synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12
Identity = 52/169 (30.77%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   44 RFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP 541
            +F+   +AAL A  +L    +           +   NDW T LIP YLK  +     Y+  K +  IHN+ +QG +  +    +  LP ++ +S D ++ Y+        N++K GI+ +D V TVS  YA+E+      G  LD ++R     + GIVNG+D  E  P
Sbjct:  109 KFAFFSKAALSALPVLGFRPD-----------IIHCNDWQTGLIPVYLKERFSQGEFYQGIKSIMTIHNLKFQGIWDLKKVKDITGLPDEYFTS-DKLEAYD------DANYLKGGIVYADRVTTVSETYAEEI-KTPFYGENLDGLMRARSNVLSGIVNGIDYDEYNP 258          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ERWCT (Glycogen synthase OS=Erwinia carotovora subsp. atroseptica GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12
Identity = 56/170 (32.94%), Postives = 83/170 (48.82%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIR----KTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+          Y    +  A+DWH  L   YL    +P      AK VF +HN+AYQG FA      L+LP+      DF   Y     G +I+++KAG+  +D + TVSP YA E+ +    G  ++ +++    +  + GI+NG+D
Sbjct:  103 YADNYLRFALLGWMGCEMACGLD---------HYWRPDIVHAHDWHAGLTCAYLAARNRP------AKSVFTVHNLAYQGLFAAGHMANLHLPS------DFFQVYGLEFYG-QISYLKAGLFYADHITTVSPTYAHEI-TLPAYGYGMEGLLKTREEEGRLSGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ENT38 (Glycogen synthase OS=Enterobacter sp. (strain 638) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12
Identity = 53/170 (31.18%), Postives = 84/170 (49.41%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKT----GIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    +  A+DWH  L P YL     P      AK VF +HN+AYQG +       ++LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+ +  E G  ++ ++R+      + GI+NG+D
Sbjct:  103 YTDNVLRFALLGWVGAEMATGLD---------PFWRPDIVHAHDWHAGLAPAYLAARGHP------AKSVFTVHNLAYQGMYYAHHMNEIDLP------WSFYNMHGLEFNG-QISFLKAGLYYADHITAVSPTYAREI-TEPEFGYGMEGLLRQRQREGRLTGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_YERE8 (Glycogen synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12
Identity = 62/206 (30.10%), Postives = 99/206 (48.06%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG----IXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            Y DN  RF+LL   A E    L+          Y    V  A+DWH  L   YL    +P      A+ VF +HN+AYQG F+      + LPA F   +  ++ Y       +I+++KAG+  +D V TVSP YA+E+ +    G  ++ ++++      + GI+NG+D     P   T+   +YDA     ++ ++  LQ  +G
Sbjct:  103 YADNYRRFALLGWMACELACGLD---------GYWRPEVVHAHDWHAGLACAYLAARGRP------ARSVFTVHNLAYQGLFSGHHLAEIQLPAAFFQMYG-LEFYG------QISYLKAGLFFADHVTTVSPTYAKEI-TQPAFGYGMEGLLQERASQGRLTGILNGVDSDIWDPQTDTLLHARYDAEDLQKKAVNKTHLQTTMG 285          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_STRZJ (Glycogen synthase OS=Streptococcus pneumoniae (strain JJA) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12
Identity = 66/213 (30.99%), Postives = 106/213 (49.77%), Query Frame = 2
Query:   23 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP*LTIYRCQYDASL*WM--------RSSSEEALQQKVG 628
            D+ D + RF+    AA+EA   ++          +  D++ V +D+HT++IP  LK  Y     Y+  + V  IHN+ +QG+F+    G L     F    + + DG  +      +NWMKAGIL ++ V TVSP YA E+ +  + G  LD I++     + GIVNG+D         +Y  Q DA L +         ++ ++  LQ++VG
Sbjct:  101 DFDDGE-RFAFFQLAAIEAMERID----------FIPDLLHV-HDYHTAMIPFLLKEKYCWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGLERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMT-SQFGCNLDQILKMESGKVSGIVNGIDAD-------LYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVG 286          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_STRPJ (Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12
Identity = 66/213 (30.99%), Postives = 106/213 (49.77%), Query Frame = 2
Query:   23 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFD-FIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP*LTIYRCQYDASL*WM--------RSSSEEALQQKVG 628
            D+ D + RF+    AA+EA   ++          +  D++ V +D+HT++IP  LK  Y     Y+  + V  IHN+ +QG+F+    G L     F    + + DG  +      +NWMKAGIL ++ V TVSP YA E+ +  + G  LD I++     + GIVNG+D         +Y  Q DA L +         ++ ++  LQ++VG
Sbjct:  101 DFDDGE-RFAFFQLAAIEAMERID----------FIPDLLHV-HDYHTAMIPFLLKEKYCWIQAYEDIETVLTIHNLEFQGQFSEGMLGDL-----FGVGLERYADGTLR--WNNCLNWMKAGILYANRVSTVSPSYAHEIMT-SQFGCNLDQILKMESGKVSGIVNGIDAD-------LYNPQTDALLDYHFNQEDLSGKAKNKAKLQERVG 286          
The following BLAST results are available for this feature:
BLAST of EY660349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
GLGA_ECO241.201e-1232.54Glycogen synthase OS=Escherichia coli O139:H28 (st... [more]
GLGA_DESRM1.201e-1229.41Glycogen synthase OS=Desulfotomaculum reducens (st... [more]
GLGA2_AGRT51.201e-1230.43Glycogen synthase 2 OS=Agrobacterium tumefaciens (... [more]
GLGA_RHITR1.568e-1233.52Glycogen synthase OS=Rhizobium tropici GN=glgA PE=... [more]
GLGA_EUBE21.568e-1230.77Glycogen synthase OS=Eubacterium eligens (strain A... [more]
GLGA_ERWCT1.568e-1232.94Glycogen synthase OS=Erwinia carotovora subsp. atr... [more]
GLGA_ENT381.568e-1231.18Glycogen synthase OS=Enterobacter sp. (strain 638)... [more]
GLGA_YERE82.048e-1230.10Glycogen synthase OS=Yersinia enterocolitica serot... [more]
GLGA_STRZJ2.048e-1230.99Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRPJ2.048e-1230.99Glycogen synthase OS=Streptococcus pneumoniae (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660349 ID=EY660349; Name=EY660349; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTTGTTCTGG
TGAAGAACAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTA
ANGGAATTGTGAACGGGATGGATGTCCAGGAGTGAACCCCTTGACTGACA
ATATATAGGTGTCAATATGATGCTTCACTGTGATGGATGCGAAGCTCTTC
TGAGGAAGCCCTCCAGCAGAAAGTGGGTGCCTGTCGATAGAATATTCTGT
CATAGGCTCATTGGTAGACTGAAGAGCAGAAGGCTCGATATTCTTGAGCT
GCATTCCCATTTCTCAAGAGATGTCAGATATAGTCCTGGACTGGCAAAAA
CCATGGAGAGCAGCTTGACAAGTTGAGAACTGTACCTGAGAAAGCAGAGA
GTACGAATTCATATTCTCTGCGCTATGAAAT
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