EY660349

Overview
NameEY660349
Unique NameEY660349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_DECAR (Glycogen synthase OS=Dechloromonas aromatica (strain RCB) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12
Identity = 64/212 (30.19%), Postives = 102/212 (48.11%), Query Frame = 2
Query:    2 HASGTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            +   TG D+ DN LRF LL + A    +  +  S       +  D+V  ANDW T+L P YL            A  V  +HNIA+QG F  E    L LP +    FD ++ ++      +++++KAG+  +  + TVSP YA+E+   E  G  L  ++  R   + GI+NG+D     P    +    Y A+    + +++ ALQ ++G
Sbjct:  101 YLDATGRDWPDNALRFGLLSRVAARLGQPDSPLS-------WQPDIVH-ANDWQTALAPAYLHYQ-------GGAASVVTVHNIAFQGCFGREMLAALGLP-EHAWRFDGVEYHD------QLSFLKAGLQLASQISTVSPTYAREI-QDEHFGYGLAPLLRHRSAELRGILNGVDTDLWNPATDPVLATGYAANRLAAKRTNKAALQTEMG 289          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_BORPD (Glycogen synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12
Identity = 56/171 (32.75%), Postives = 87/171 (50.88%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMD 523
            G+ Y DN +RF+ L  AA+     L         G    D++  A DWH  L+P  ++      G+ +  K V  +HN+A+QG F  E  G + +P  + +     DG    + GR IN+MKAG+  +D + TVS +YA+E+ +  E G  LD ++  R   +  I NG+D
Sbjct:  105 GQPYADNAVRFAALAHAAMRVAAGL--------PGMRRPDILH-AQDWHAGLVPLLVRAA----GL-RYVKTVLTVHNLAFQGSFELECAGQIGVPGAYCTD----DGAR--LHGR-INFMKAGLRYADRITTVSRNYAREIMT-PEFGCGLDPLLRARAADLAPIPNGID 253          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_AGRRK (Glycogen synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12
Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 2
Query:    2 HASGTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMD 523
            +   TG+DY DN  RF+ L  A  E        +     G +  D+V V +DW ++L+P Y++  Y P     S   V  IHNIA+QG+F    F  L LPA    S   I+ Y        I ++K G+  +  + TVSP YA E+ +  E G+ L+ +I  R   + GIVNG+D
Sbjct:   96 YVDATGKDYPDNWQRFAALSLAGAEI-------AAGQMPG-WQPDLVHV-HDWQSALVPVYMR--YAPTPELPS---VLTIHNIAFQGQFGPSIFPGLRLPAH-AYSMQGIEYYG------DIGFLKGGLQTAHALTTVSPSYAGEILT-PEFGMGLEGVIASRAASLHGIVNGID 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_METSB (Glycogen synthase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 61/207 (29.47%), Postives = 96/207 (46.38%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            G D+ DN  RF+ LCQ           ++  + + P     +  A+DW   L   YL    + +        V  IHN+A+QG++  E  G L LP Q   S + ++ Y        I ++KA +  SD + TVSP YA E+ +  E G+ LD ++R     + GI+NG+D +   P    +    +D      R +++ ALQ K G
Sbjct:  104 GRDFPDNPFRFAALCQTG---------SALGFGAAPGFLPDIVHAHDWQAGLAAAYLHYDGRER-----PGTVATIHNLAFQGKYPAELLGALGLPPQ-AFSLEGVEYYG------TIGFLKAALALSDRITTVSPTYAAEIRT-PEHGMGLDGLLRTRAERLIGILNGIDDEVWDPSSDPLITEPFDVETLARRPANKAALQDKFG 288          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_DESAA (Glycogen synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 2
Query:  140 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP 541
            V +ANDW T LIP  +   + P+        VF IHNI Y G    ED  +L L   + S ++ ++ Y +      ++ +KAGI  ++ ++TVSP Y++E+    EQG  LD ++RK    + GI+NG+D Q  +P
Sbjct:  134 VILANDWQTGLIPALMDQGHMPQ-----TASVFVIHNIGYLGYVPPEDASMLGLSNTYLS-YEGMEFYGQ------LSLLKAGIAYANKLVTVSPTYSREI-QTTEQGAGLDGLMRKRSQDLAGILNGVDFQVWSP 256          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CLONN (Glycogen synthase OS=Clostridium novyi (strain NT) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 60/202 (29.70%), Postives = 100/202 (49.50%), Query Frame = 2
Query:   32 DNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQE*TP*LTIYRC-QYDASL*WMRSSSEEALQQ 619
            D+  RFS   +A LE+   ++          +  DV+   NDWHT++    L+  Y       + K V+ IHN+ YQGRF  E  + LL    ++  +  F + D          I++MKAGI+ +D + TVSP YA+E+   E  G  L+ ++  R   + GI+NG+D     P   ++   +YD +    ++ ++E LQ+
Sbjct:  103 DDGERFSFFSRAILESINHIS---------DFTPDVLH-CNDWHTAMTIPMLRDQYFNNPKLNNIKTVYTIHNLKYQGRFGKEILWELLGFGDEYFSEDKFKYYD---------SISFMKAGIVYADAITTVSPTYAEEI-KTEYYGEGLNGLLQSRSKDLYGILNGIDTDVNNPSTDMFLFDKYDVNNLEAKARNKEKLQE 284          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_SALAR (Glycogen synthase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.782e-12
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKT----GIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+ +  +    ++ ++R+      + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHIDDIELP------WSFFNMHGLEFNG-QISFLKAGLYYADHITAVSPTYAREI-TEPQFAYGMEGLLRQRHLEGRLSGVLNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_NITEC (Glycogen synthase OS=Nitrosomonas eutropha (strain C91) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.782e-12
Identity = 66/208 (31.73%), Postives = 102/208 (49.04%), Query Frame = 2
Query:   14 TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQE*TP*LTIYRC-QYDASL*WMRSSSEEALQQKVG 628
            TG+D+ DN  RF LL +       +L  +++     P   D+V   NDW + L P YL   +   G  K A  +  +HN+A+QG F  ++   L LP +   S    + Y        ++++KAGI  SD + TVSP YA+E+   E  G  L  ++  R   I GIVNG+D     P    Y   +Y +     +++++ ALQQ +G
Sbjct:  115 TGQDWPDNAQRFGLLSKIGA----LLASDASPLAWVP---DIVH-CNDWQSGLTPAYL---HFHSG--KKAASLITLHNLAFQGNFPSDEVAKLGLPDE-SFSMHGAEFYGN------LSFLKAGIYYSDHISTVSPGYAREI-QQEPLGFGLQGLLAKRSDDITGIVNGIDTAIWNPATDPYLVKKYTSRNLSAKAANKLALQQTMG 301          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_KLEP7 (Glycogen synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.782e-12
Identity = 53/170 (31.18%), Postives = 83/170 (48.82%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKT----GIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+ +  +    ++ ++R+      + GI+NG+D
Sbjct:  103 YPDNVLRFALLGWVGSEMASGLD---------PFWRPDVVHAHDWHAGLTPAYLAARGRP------AKSVFTVHNLAYQGMFYSWHMNDIELP------WSFYNMHGLEFNG-QISFLKAGLYYADHITAVSPTYAREI-TEPQYAYGMEGLLRQRHHEGRLSGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_KLEP3 (Glycogen synthase OS=Klebsiella pneumoniae (strain 342) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.782e-12
Identity = 53/170 (31.18%), Postives = 83/170 (48.82%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKT----GIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+ +  +    ++ ++R+      + GI+NG+D
Sbjct:  103 YTDNVLRFALLGWVGSEMASGLD---------PFWRPDVVHAHDWHAGLTPAYLAARGRP------AKSVFTVHNLAYQGMFYSWHMNDIELP------WSFYNMHGLEFNG-QISFLKAGLYYADHITAVSPTYAREI-TEPQYAYGMEGLLRQRHHEGRLSGILNGVD 249          
The following BLAST results are available for this feature:
BLAST of EY660349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
GLGA_DECAR4.562e-1230.19Glycogen synthase OS=Dechloromonas aromatica (stra... [more]
GLGA_BORPD4.562e-1232.75Glycogen synthase OS=Bordetella petrii (strain ATC... [more]
GLGA_AGRRK4.562e-1234.66Glycogen synthase OS=Agrobacterium radiobacter (st... [more]
GLGA_METSB5.959e-1229.47Glycogen synthase OS=Methylocella silvestris (stra... [more]
GLGA_DESAA5.959e-1235.29Glycogen synthase OS=Desulfatibacillum alkenivoran... [more]
GLGA_CLONN5.959e-1229.70Glycogen synthase OS=Clostridium novyi (strain NT)... [more]
GLGA_SALAR7.782e-1230.59Glycogen synthase OS=Salmonella arizonae (strain A... [more]
GLGA_NITEC7.782e-1231.73Glycogen synthase OS=Nitrosomonas eutropha (strain... [more]
GLGA_KLEP77.782e-1231.18Glycogen synthase OS=Klebsiella pneumoniae subsp. ... [more]
GLGA_KLEP37.782e-1231.18Glycogen synthase OS=Klebsiella pneumoniae (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660349 ID=EY660349; Name=EY660349; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTTGTTCTGG
TGAAGAACAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTA
ANGGAATTGTGAACGGGATGGATGTCCAGGAGTGAACCCCTTGACTGACA
ATATATAGGTGTCAATATGATGCTTCACTGTGATGGATGCGAAGCTCTTC
TGAGGAAGCCCTCCAGCAGAAAGTGGGTGCCTGTCGATAGAATATTCTGT
CATAGGCTCATTGGTAGACTGAAGAGCAGAAGGCTCGATATTCTTGAGCT
GCATTCCCATTTCTCAAGAGATGTCAGATATAGTCCTGGACTGGCAAAAA
CCATGGAGAGCAGCTTGACAAGTTGAGAACTGTACCTGAGAAAGCAGAGA
GTACGAATTCATATTCTCTGCGCTATGAAAT
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