EY660349

Overview
NameEY660349
Unique NameEY660349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_SALCH (Glycogen synthase OS=Salmonella choleraesuis GN=glgA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKT----GIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G +++++KAG+  +D +  VSP YA+E+ +  +    ++ ++R+      + GI+NG+D
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNG-QLSFLKAGLYYADHITAVSPTYAREI-TEPQFAYGMEGLLRQRHLEGRLSGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_SALA4 (Glycogen synthase OS=Salmonella agona (strain SL483) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKT----GIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G +++++KAG+  +D +  VSP YA+E+ +  +    ++ ++R+      + GI+NG+D
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNG-QLSFLKAGLYYADHITAVSPTYAREI-TEPQFAYGMEGLLRQRHLEGRLSGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ROSDO (Glycogen synthase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 56/178 (31.46%), Postives = 84/178 (47.19%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYG-EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP 541
            G D+ DN LRF  L   A +             +G  G +  +  A+DW   L+P YL  M  PK        V  IHNIA+QG F+ +    L L A   +  D ++ Y        + ++KAG+  +D + TVSP YA+E+    E G+ L+ ++R     + GI+NG+D     P
Sbjct:  101 GTDWPDNPLRFGALSWVAADIAA----------NGAAGWQPEIVHAHDWQAGLVPAYLHQMDAPK-----PPCVLTIHNIAFQGLFSPDLMAPLGLDAALYTQ-DGMEFYGN------LGFLKAGLAFADKITTVSPTYAREIMQ-PEFGMGLEGLLRARARDVSGILNGIDTDVWNP 255          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_LACPL (Glycogen synthase OS=Lactobacillus plantarum GN=glgA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 51/165 (30.91%), Postives = 79/165 (47.88%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF---AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIR--KTGIXGIVNGMDVQE*TP*LTI-YRCQYDASL*WMRSSSEEALQQKVG 628
            NDWHT+ IP  L   Y     Y+  K V  IHN+ +QG +     +    +      ++   F D         ++NW+K GI  +D V TVSP YAQE+      G  LD ++R  +  + GI+NG+D+Q   P   +     Y A     +  ++ ALQ+++G
Sbjct:  134 NDWHTAFIPVLLAEKYYWIEAYRDIKTVLTIHNLQFQGVYDPIILDSLFRIGTETYTEAGVAFYD---------QVNWLKGGINFADAVNTVSPTYAQEI-QTPAFGERLDGVLRANRYKLSGILNGIDMQLYDPATDLALTANYSAKDLKPKRQNKRALQRRLG 288          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CLOPE (Glycogen synthase OS=Clostridium perfringens GN=glgA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 59/183 (32.24%), Postives = 87/183 (47.54%), Query Frame = 2
Query:   11 GTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF----EDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP 541
            G G+D +    RF+   +A LE  + ++          +  D++   NDW T +IP   K  Y     YK+ K V  IHN+ +QG F+     E FG    P +   S +F  G         +++MK  I  SD +LTVS  YA+E+      G  LD ++R+ G  + GIVNG+D  E  P
Sbjct:  106 GEGDDGE----RFAFFDRAVLETLKEID----------WCPDIIH-CNDWQTGMIPVLHKLEYSKDPFYKNIKTVTSIHNLLFQGNFSADVLPELFGYDYEPVR-NGSLEFYGG---------MSFMKGAINYSDRILTVSETYAKEI-KTPYFGENLDGLLRERGYALKGIVNGIDYDEFNP 262          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBB (Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 60/176 (34.09%), Postives = 85/176 (48.30%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP 541
            + D+  RF+   +A L+  + L+   N           V   NDW T +IP  LK  Y  K M Y   K VF IHNIA+QG      F  + LP  F   +D+    N  ++    + +MK  I  SDM+ TVS  YA+E+    E G  LD ++R+    + GI+NG+D  E  P
Sbjct:  101 HYDDAERFAFFDRAVLDMIKQLDWKPN-----------VIHCNDWQTGMIPVLLKLEYMRKDMFYWDIKSVFSIHNIAFQG-----VFDPVILPELF--GYDYEQYTNTNLKFDDGVGFMKGAINYSDMITTVSYSYAEEI-KTPEFGERLDWLLREKSYMLRGILNGIDYDEFNP 257          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11
Identity = 45/132 (34.09%), Postives = 62/132 (46.97%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP 541
            NDW  +LIP Y+   Y  K      K +  IHN+ YQG F    F    LP +            K V+    N++K GI+ +  + TVSP YA+E+    E G  LD  +R     + GI+NG+D  E  P
Sbjct:  130 NDWQPALIPAYISAFYNGK-----PKTLLTIHNLGYQGEFDKSYFYKTGLPEKLWQE-------GKAVKNGAFNFLKTGIVTATAISTVSPTYAKEI-QTPEYGAGLDETLRALSDRLFGILNGIDYSEYNP 248          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11
Identity = 47/129 (36.43%), Postives = 65/129 (50.39%), Query Frame = 2
Query:  149 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQF--KSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRK--TGIXGIVNGMD 523
            +NDWHT+++  Y +   K    Y+S K VF IHN+ YQG F+       +L   +  + +  F D          IN+MK  I+ SD V TVS  YA E+      G  LD +IR+    I GI NG+D
Sbjct:  131 SNDWHTAMVNVYARDFAKGDPFYESIKTVFTIHNLKYQGVFSSNSLRQTDLSPMYFTEDALKFYDA---------INFMKGAIVFSDRVTTVSKTYADEI-KYSFFGEGLDGVIRQYHYKISGITNGID 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_ESCF3 (Glycogen synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11
Identity = 55/169 (32.54%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN +RF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP     SF  I+G        +I+++K+G+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D
Sbjct:  103 YTDNVIRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMDEIQLP----WSFFNINGLE---FNGQISFLKSGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBA (Glycogen synthase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11
Identity = 59/176 (33.52%), Postives = 85/176 (48.30%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR-GRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP 541
            + D+  RF+   +A L+  + L+   N           +   NDW T +IP  LK  Y  K M Y   K VF IHNIA+QG      F  + LP  F   +D+    N  ++    + +MK  I  SDM+ TVS  YA+E+    E G  LD ++R+    + GI+NG+D  E  P
Sbjct:  101 HYDDAERFAFFDRAVLDMIKQLDWKPN-----------IIHCNDWQTGMIPVLLKLEYMRKDMFYWDIKSVFSIHNIAFQG-----VFDPVILPELF--GYDYEQYTNTNLKFDDGVGFMKGAINYSDMITTVSYSYAEEI-KTPEFGERLDWLLREKSYMLRGILNGIDYDEFNP 257          
The following BLAST results are available for this feature:
BLAST of EY660349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
GLGA_SALCH1.016e-1130.59Glycogen synthase OS=Salmonella choleraesuis GN=gl... [more]
GLGA_SALA41.016e-1130.59Glycogen synthase OS=Salmonella agona (strain SL48... [more]
GLGA_ROSDO1.016e-1131.46Glycogen synthase OS=Roseobacter denitrificans (st... [more]
GLGA_LACPL1.016e-1130.91Glycogen synthase OS=Lactobacillus plantarum GN=gl... [more]
GLGA_CLOPE1.016e-1132.24Glycogen synthase OS=Clostridium perfringens GN=gl... [more]
GLGA_CLOBB1.016e-1134.09Glycogen synthase OS=Clostridium botulinum (strain... [more]
GLGA_KOSOT1.327e-1134.09Glycogen synthase OS=Kosmotoga olearia (strain TBF... [more]
GLGA_FINM21.327e-1136.43Glycogen synthase OS=Finegoldia magna (strain ATCC... [more]
GLGA_ESCF31.327e-1132.54Glycogen synthase OS=Escherichia fergusonii (strai... [more]
GLGA_CLOBA1.327e-1133.52Glycogen synthase OS=Clostridium botulinum (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660349 ID=EY660349; Name=EY660349; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTTGTTCTGG
TGAAGAACAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTA
ANGGAATTGTGAACGGGATGGATGTCCAGGAGTGAACCCCTTGACTGACA
ATATATAGGTGTCAATATGATGCTTCACTGTGATGGATGCGAAGCTCTTC
TGAGGAAGCCCTCCAGCAGAAAGTGGGTGCCTGTCGATAGAATATTCTGT
CATAGGCTCATTGGTAGACTGAAGAGCAGAAGGCTCGATATTCTTGAGCT
GCATTCCCATTTCTCAAGAGATGTCAGATATAGTCCTGGACTGGCAAAAA
CCATGGAGAGCAGCTTGACAAGTTGAGAACTGTACCTGAGAAAGCAGAGA
GTACGAATTCATATTCTCTGCGCTATGAAAT
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