EY660349

Overview
NameEY660349
Unique NameEY660349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CITK8 (Glycogen synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.327e-11
Identity = 54/169 (31.95%), Postives = 82/169 (48.52%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE-EQGVE--LDNIIRKTGIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F       + LP      + F + +     G +I+++KAG+  +D +  VSP YA+E+   +   G+E  L    ++  + G++NG+D
Sbjct:  103 YTDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAHHMDDIQLP------WSFYNMHGLEFNG-QISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLRQRHQEGRLSGVLNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_STRS7 (Glycogen synthase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.734e-11
Identity = 58/172 (33.72%), Postives = 84/172 (48.84%), Query Frame = 2
Query:   23 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR---KINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMD 523
            D+ D + RF+    AA+EA   + +            D++ V +D+HT++IP  LK  Y     Y++ + VF IHNIA+QG+F          P      F    G  +    R    +NWMKA +L +D V TVSP YA E+      G  LD ++R     + GIVNG+D
Sbjct:  101 DWDDGE-RFAYFQLAAIEAMEKIGVIP----------DILHV-HDYHTAMIPFLLKEKYHWIQAYQAIRTVFTIHNIAFQGQFD---------PGMLGDLFGVGIGRYEDGTLRWHDCLNWMKAAVLYADRVTTVSPSYAHEI-QTPAFGQGLDQVMRMEAGKLSGIVNGID 250          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_SALTI (Glycogen synthase OS=Salmonella typhi GN=glgA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.734e-11
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKT----GIXGIVNGMD 523
            Y DN LRF+LL     E    L+         P+    V  A+DWH  L P YL    +P      AK VF +HN+AYQG F  +    + LP      + F + +     G +++++KAG+  +D +  VSP YA+E+ +  +    ++ ++R+      + GI+NG+D
Sbjct:  103 YIDNVLRFALLGWVGCEMACGLD---------PFWRPDVVHAHDWHAGLAPAYLAARGRP------AKSVFTVHNLAYQGMFYAKHMDDIELP------WSFFNMHGLEFNG-QLSFLKAGLYYADHITAVSPTYAREI-TEPQFAYGMEGLLRQRHLEGRLSGILNGVD 249          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CLOB8 (Glycogen synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.734e-11
Identity = 57/179 (31.84%), Postives = 86/179 (48.04%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-YKSAKVVFCIHNIAYQGRF----AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKT--GIXGIVNGMDVQE*TP 541
            + D+  RF+   +A L+  R ++          +  D++   NDW T ++P  LK  YK   M Y   K V+ IHNIA+QG F      E FG  ++     +   F DG         +++MK G+  SD++ TVS  YA E+    E G  LD ++R+    + GI NG+D  E  P
Sbjct:  101 FYDDAERFAFFDRAVLDMLRQID----------WQPDLIH-CNDWQTGMLPVLLKFEYKRNDMFYWKMKCVYSIHNIAFQGVFDPQILPELFGF-DMELYNNTCLKFDDG---------VSYMKGGLCYSDVITTVSNTYAYEI-QTPEYGQRLDGVLRERSYALRGITNGIDYDEFNP 257          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIRD (Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.734e-11
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   14 TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQE*TP 541
            TG+DY DN  RF+ L   +L A RI            +  D+V  A+DW  ++ P Y++    P+        +  IHNIA+QG+F    F  L LPA      + I+ YN       ++++K G+  +  + TVSP YA+E+ +  E G+ L+ +I  R   + GIVNG+D     P
Sbjct:  100 TGKDYPDNWKRFAAL---SLAAARI-----GAGVLPGWRPDMVH-AHDWQAAMTPVYMRYAETPE-----IPSLLTIHNIAFQGQFGANIFSKLALPAH-AFGMEGIEYYN------DVSFLKGGLQTATALSTVSPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNP 255          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA1_AGRT5 (Glycogen synthase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.734e-11
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 2
Query:   14 TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNII--RKTGIXGIVNGMDVQE*TP 541
            TG+DY DN  RF+ L   +L A RI            +  D+V  A+DW  ++ P Y++    P+        +  IHNIA+QG+F    F  L LPA      + I+ YN       ++++K G+  +  + TVSP YA+E+ +  E G+ L+ +I  R   + GIVNG+D     P
Sbjct:  100 TGKDYPDNWKRFAAL---SLAAARI-----GAGVLPGWRPDMVH-AHDWQAAMTPVYMRYAETPE-----IPSLLTIHNIAFQGQFGANIFSKLALPAH-AFGMEGIEYYN------DVSFLKGGLQTATALSTVSPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNP 255          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_POLNA (Glycogen synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glgA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.264e-11
Identity = 64/207 (30.92%), Postives = 101/207 (48.79%), Query Frame = 2
Query:   17 GEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            G ++ DN  RF LL   A       +L + +   G +  DV+  A+DWH ++   Y       +     A  V+ IHN+AYQG F  +DF LL LP++                G ++++MKAG+  +  + TVSP YA E+ + E  G  LD +IR  G  + GI+NG+D     P    +    Y A +   ++  + ALQ+++G
Sbjct:  104 GGEWPDNLQRFGLLGWVAA------HLAAGELDPG-WTPDVLH-AHDWHAAMACAYAACHPATR-----AATVYTIHNLAYQGLFDEDDFHLLGLPSRLMVPVGL------EFHG-QLSFMKAGLKYAHRITTVSPTYAHEIAT-EAFGCGLDGVIRARGADVSGILNGVDGAVWNPASDPLIAAPYSADMLDGKALCKAALQRELG 289          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_HYDS0 (Glycogen synthase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=glgA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.957e-11
Identity = 51/174 (29.31%), Postives = 88/174 (50.57%), Query Frame = 2
Query:   26 YQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIR-KTGIXGIVNGMDVQE*TP 541
            Y+DN LRF+    A+LE    + ++            D++ + +DWHT+L+  Y    +K          V  IHNIA+QG F       + +P    +  D ++ YN+      +N++K GI+ SD++ TVS  +A+E+ +    G  L+ ++R K  + GI+NG+D +   P
Sbjct:  103 YEDNYLRFAFFSLASLETLSHVCHI-----------PDIIHI-HDWHTALVAVYKDLYFKH---LDETATVLTIHNIAFQGIFLGHILPQIGIPWGLFNPED-LEFYNQ------VNFLKGGIVHSDVITTVSKTHAKEIQT--NMGFGLEGVLREKRYVFGILNGIDTESWNP 252          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTE (Glycogen synthase OS=Chlorobium tepidum GN=glgA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.957e-11
Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  152 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGEEQGVELDNIIRKTG--IXGIVNGMDVQE*TP*L-TIYRCQYDASL*WMRSSSEEALQQKVG 628
            +DWH  L+    KT Y     +K  KVV  IHN+  QG F  + F   +L  +   + D        + G ++N +  GI  +D+V T S  YA++L    E    +D  ++  G    GI+NGMD ++  P    + + +Y A    M+   ++ L ++VG
Sbjct:  148 HDWHAGLVALLAKTRYAKHDFFKKVKVVQTIHNVYRQGVFPSKAF-QKHLDPEVCDALD--------MEGGEVNLLATGIKHADLVTTTSDRYARQLLDDPELSFGMDKALKACGDRFHGILNGMDTRQWNPSSDKLIKKRYSAEQPEMKLEDKKVLLEEVG 300          
BLAST of EY660349 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIN (Glycogen synthase OS=Haemophilus influenzae GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11
Identity = 56/171 (32.75%), Postives = 82/171 (47.95%), Query Frame = 2
Query:   23 DYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELCSGE----EQGVELDNIIRKTGIXGIVNGMD 523
            DY DN  RF+LL     E    L+          +    V  A+DWH  L   YL    KP      AK VF IHN+AYQG+F++     + LP    +    ++G        +I+++K+G+  SD    VSP YAQE+ + E     QG+ L  +  +  + GI+NG+D
Sbjct:  102 DYGDNYKRFALLGWVGAELATGLD---------SWWRAEVVHAHDWHAGLCVAYLFNKGKP------AKSVFTIHNLAYQGQFSYHHLYEIGLP----TGMFHVEGLE---LFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGL-LSGLKAQGRLVGILNGVD 249          
The following BLAST results are available for this feature:
BLAST of EY660349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 258
Match NameE-valueIdentityDescription
GLGA_CITK81.327e-1131.95Glycogen synthase OS=Citrobacter koseri (strain AT... [more]
GLGA_STRS71.734e-1133.72Glycogen synthase OS=Streptococcus equi subsp. zoo... [more]
GLGA_SALTI1.734e-1130.59Glycogen synthase OS=Salmonella typhi GN=glgA PE=3... [more]
GLGA_CLOB81.734e-1131.84Glycogen synthase OS=Clostridium beijerinckii (str... [more]
GLGA1_RHIRD1.734e-1132.58Glycogen synthase 1 OS=Rhizobium radiobacter GN=gl... [more]
GLGA1_AGRT51.734e-1132.58Glycogen synthase 1 OS=Agrobacterium tumefaciens (... [more]
GLGA_POLNA2.264e-1130.92Glycogen synthase OS=Polaromonas naphthalenivorans... [more]
GLGA_HYDS02.957e-1129.31Glycogen synthase OS=Hydrogenobaculum sp. (strain ... [more]
GLGA_CHLTE2.957e-1129.01Glycogen synthase OS=Chlorobium tepidum GN=glgA PE... [more]
GLGA_HAEIN3.862e-1132.75Glycogen synthase OS=Haemophilus influenzae GN=glg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-021-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY660349 ID=EY660349; Name=EY660349; organism=Citrus sinensis; type=EST; length=831bp
CCACGCGTCCGGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCA
GCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAAC
AGCAACAAATATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGC
TAATGACTGGCATACTTCCCTTATCCCTTGTTACCTGAAAACTATGTATA
AGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTTGTATCCACAAT
ATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACCT
TCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAAC
CTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCA
GACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTTGTTCTGG
TGAAGAACAAGGAGTAGAATTGGATAATATCATCCGTAAAACTGGCATTA
ANGGAATTGTGAACGGGATGGATGTCCAGGAGTGAACCCCTTGACTGACA
ATATATAGGTGTCAATATGATGCTTCACTGTGATGGATGCGAAGCTCTTC
TGAGGAAGCCCTCCAGCAGAAAGTGGGTGCCTGTCGATAGAATATTCTGT
CATAGGCTCATTGGTAGACTGAAGAGCAGAAGGCTCGATATTCTTGAGCT
GCATTCCCATTTCTCAAGAGATGTCAGATATAGTCCTGGACTGGCAAAAA
CCATGGAGAGCAGCTTGACAAGTTGAGAACTGTACCTGAGAAAGCAGAGA
GTACGAATTCATATTCTCTGCGCTATGAAAT
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